EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000012095 (Gene tree)
Gene ID: 101585273
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 225999 bases
Position: chrJH651535.1:14588049-14814047
Accession: 101585273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016430	S1	PF00575.23	1.3e-09	1	1
ENSODEP00000016429	S1	PF00575.23	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016641	SRBD1-202	2865	XM_012513917	ENSODEP00000016430	954 (aa)	-	-
ENSODET00000016640	SRBD1-201	2952	-	ENSODEP00000016429	983 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012095	SRBD1	100	84.523	ENSG00000068784	SRBD1	100	84.523	Homo_sapiens
ENSODEG00000012095	SRBD1	100	50.888	ENSAPOG00000005103	si:ch211-117n7.8	99	50.888	Acanthochromis_polyacanthus
ENSODEG00000012095	SRBD1	100	87.084	ENSAMEG00000005993	SRBD1	100	87.084	Ailuropoda_melanoleuca
ENSODEG00000012095	SRBD1	86	57.497	ENSACIG00000009875	si:ch211-117n7.8	85	57.497	Amphilophus_citrinellus
ENSODEG00000012095	SRBD1	96	53.256	ENSAOCG00000024718	si:ch211-117n7.8	94	53.354	Amphiprion_ocellaris
ENSODEG00000012095	SRBD1	95	53.397	ENSAPEG00000002645	si:ch211-117n7.8	97	53.397	Amphiprion_percula
ENSODEG00000012095	SRBD1	85	57.857	ENSATEG00000010844	si:ch211-117n7.8	84	57.857	Anabas_testudineus
ENSODEG00000012095	SRBD1	100	70.270	ENSAPLG00000006313	SRBD1	100	70.270	Anas_platyrhynchos
ENSODEG00000012095	SRBD1	100	84.623	ENSANAG00000025573	SRBD1	100	84.623	Aotus_nancymaae
ENSODEG00000012095	SRBD1	85	56.243	ENSACLG00000024219	si:ch211-117n7.8	94	52.445	Astatotilapia_calliptera
ENSODEG00000012095	SRBD1	92	58.000	ENSAMXG00000004294	SRBD1	93	57.281	Astyanax_mexicanus
ENSODEG00000012095	SRBD1	100	85.010	ENSBTAG00000007508	SRBD1	97	85.714	Bos_taurus
ENSODEG00000012095	SRBD1	74	30.541	WBGene00022830	ZK973.1	91	30.676	Caenorhabditis_elegans
ENSODEG00000012095	SRBD1	100	84.221	ENSCJAG00000000727	SRBD1	100	84.221	Callithrix_jacchus
ENSODEG00000012095	SRBD1	100	86.318	ENSCAFG00000002554	SRBD1	100	86.318	Canis_familiaris
ENSODEG00000012095	SRBD1	100	83.384	ENSCAFG00020026284	SRBD1	99	90.071	Canis_lupus_dingo
ENSODEG00000012095	SRBD1	100	84.708	ENSCHIG00000016535	SRBD1	98	85.412	Capra_hircus
ENSODEG00000012095	SRBD1	100	86.660	ENSTSYG00000012797	SRBD1	100	86.660	Carlito_syrichta
ENSODEG00000012095	SRBD1	100	90.853	ENSCPOG00000004773	SRBD1	100	90.853	Cavia_porcellus
ENSODEG00000012095	SRBD1	100	85.126	ENSCCAG00000025589	SRBD1	100	85.126	Cebus_capucinus
ENSODEG00000012095	SRBD1	100	85.226	ENSCATG00000039530	SRBD1	100	85.226	Cercocebus_atys
ENSODEG00000012095	SRBD1	100	92.718	ENSCLAG00000008623	SRBD1	100	92.718	Chinchilla_lanigera
ENSODEG00000012095	SRBD1	100	85.528	ENSCSAG00000013350	SRBD1	100	85.528	Chlorocebus_sabaeus
ENSODEG00000012095	SRBD1	87	92.357	ENSCHOG00000003805	SRBD1	87	92.357	Choloepus_hoffmanni
ENSODEG00000012095	SRBD1	100	72.487	ENSCPBG00000005677	SRBD1	100	72.431	Chrysemys_picta_bellii
ENSODEG00000012095	SRBD1	80	41.997	ENSCING00000005950	-	99	41.997	Ciona_intestinalis
ENSODEG00000012095	SRBD1	81	42.894	ENSCSAVG00000000861	-	99	42.894	Ciona_savignyi
ENSODEG00000012095	SRBD1	99	84.894	ENSCANG00000016307	SRBD1	99	84.894	Colobus_angolensis_palliatus
ENSODEG00000012095	SRBD1	100	82.944	ENSCGRG00001000513	Srbd1	100	82.944	Cricetulus_griseus_chok1gshd
ENSODEG00000012095	SRBD1	100	82.944	ENSCGRG00000002283	Srbd1	100	82.944	Cricetulus_griseus_crigri
ENSODEG00000012095	SRBD1	86	56.655	ENSCSEG00000000856	si:ch211-117n7.8	85	56.773	Cynoglossus_semilaevis
ENSODEG00000012095	SRBD1	87	57.226	ENSCVAG00000020212	si:ch211-117n7.8	91	57.226	Cyprinodon_variegatus
ENSODEG00000012095	SRBD1	100	85.686	ENSDNOG00000018686	SRBD1	100	85.686	Dasypus_novemcinctus
ENSODEG00000012095	SRBD1	100	85.031	ENSDORG00000010468	Srbd1	100	85.031	Dipodomys_ordii
ENSODEG00000012095	SRBD1	80	36.478	FBgn0051156	CG31156	79	36.730	Drosophila_melanogaster
ENSODEG00000012095	SRBD1	89	81.785	ENSETEG00000000739	SRBD1	92	81.785	Echinops_telfairi
ENSODEG00000012095	SRBD1	74	48.000	ENSEBUG00000008902	si:ch211-117n7.8	96	48.000	Eptatretus_burgeri
ENSODEG00000012095	SRBD1	100	83.835	ENSEASG00005003132	SRBD1	97	93.631	Equus_asinus_asinus
ENSODEG00000012095	SRBD1	100	87.048	ENSECAG00000013865	SRBD1	98	87.048	Equus_caballus
ENSODEG00000012095	SRBD1	97	54.603	ENSELUG00000012592	si:ch211-117n7.8	92	54.603	Esox_lucius
ENSODEG00000012095	SRBD1	100	86.847	ENSFCAG00000005101	SRBD1	100	86.847	Felis_catus
ENSODEG00000012095	SRBD1	93	71.969	ENSFALG00000012966	SRBD1	100	68.172	Ficedula_albicollis
ENSODEG00000012095	SRBD1	97	90.651	ENSFDAG00000016670	SRBD1	99	90.651	Fukomys_damarensis
ENSODEG00000012095	SRBD1	85	58.095	ENSFHEG00000019480	si:ch211-117n7.8	82	58.095	Fundulus_heteroclitus
ENSODEG00000012095	SRBD1	51	53.521	ENSGMOG00000018010	-	99	53.521	Gadus_morhua
ENSODEG00000012095	SRBD1	100	70.243	ENSGALG00000009990	SRBD1	100	70.344	Gallus_gallus
ENSODEG00000012095	SRBD1	95	52.834	ENSGAFG00000019664	si:ch211-117n7.8	93	52.804	Gambusia_affinis
ENSODEG00000012095	SRBD1	63	58.560	ENSGACG00000010794	si:ch211-117n7.8	100	59.840	Gasterosteus_aculeatus
ENSODEG00000012095	SRBD1	85	79.567	ENSGAGG00000006166	SRBD1	99	79.567	Gopherus_agassizii
ENSODEG00000012095	SRBD1	97	84.933	ENSGGOG00000005910	SRBD1	100	84.917	Gorilla_gorilla
ENSODEG00000012095	SRBD1	95	47.219	ENSHBUG00000013207	si:ch211-117n7.8	96	47.357	Haplochromis_burtoni
ENSODEG00000012095	SRBD1	99	91.002	ENSHGLG00000018153	-	99	91.002	Heterocephalus_glaber_female
ENSODEG00000012095	SRBD1	99	90.798	ENSHGLG00100015183	-	99	90.798	Heterocephalus_glaber_male
ENSODEG00000012095	SRBD1	87	60.782	ENSIPUG00000009661	srbd1	85	60.782	Ictalurus_punctatus
ENSODEG00000012095	SRBD1	100	88.787	ENSSTOG00000005898	SRBD1	100	88.787	Ictidomys_tridecemlineatus
ENSODEG00000012095	SRBD1	100	79.370	ENSJJAG00000022244	Srbd1	100	79.370	Jaculus_jaculus
ENSODEG00000012095	SRBD1	86	56.501	ENSKMAG00000003473	si:ch211-117n7.8	84	56.501	Kryptolebias_marmoratus
ENSODEG00000012095	SRBD1	85	56.938	ENSLBEG00000027518	si:ch211-117n7.8	82	56.938	Labrus_bergylta
ENSODEG00000012095	SRBD1	86	69.668	ENSLACG00000009790	SRBD1	99	69.668	Latimeria_chalumnae
ENSODEG00000012095	SRBD1	96	59.786	ENSLOCG00000016360	si:ch211-117n7.8	99	56.207	Lepisosteus_oculatus
ENSODEG00000012095	SRBD1	100	85.528	ENSMFAG00000042026	SRBD1	100	85.528	Macaca_fascicularis
ENSODEG00000012095	SRBD1	100	85.327	ENSMMUG00000003490	SRBD1	100	85.327	Macaca_mulatta
ENSODEG00000012095	SRBD1	100	82.915	ENSMNEG00000034701	SRBD1	100	82.915	Macaca_nemestrina
ENSODEG00000012095	SRBD1	100	85.327	ENSMLEG00000000745	SRBD1	100	85.327	Mandrillus_leucophaeus
ENSODEG00000012095	SRBD1	83	55.704	ENSMAMG00000021921	si:ch211-117n7.8	84	55.595	Mastacembelus_armatus
ENSODEG00000012095	SRBD1	85	56.243	ENSMZEG00005027369	si:ch211-117n7.8	94	52.445	Maylandia_zebra
ENSODEG00000012095	SRBD1	81	74.060	ENSMGAG00000010273	SRBD1	100	74.060	Meleagris_gallopavo
ENSODEG00000012095	SRBD1	81	87.639	ENSMAUG00000013916	Srbd1	95	87.639	Mesocricetus_auratus
ENSODEG00000012095	SRBD1	100	87.035	ENSMICG00000007835	SRBD1	100	87.035	Microcebus_murinus
ENSODEG00000012095	SRBD1	100	82.843	ENSMOCG00000018716	Srbd1	100	82.843	Microtus_ochrogaster
ENSODEG00000012095	SRBD1	86	55.686	ENSMMOG00000007507	si:ch211-117n7.8	88	55.686	Mola_mola
ENSODEG00000012095	SRBD1	99	51.041	ENSMALG00000001562	si:ch211-117n7.8	99	51.140	Monopterus_albus
ENSODEG00000012095	SRBD1	100	81.929	MGP_CAROLIEiJ_G0021934	Srbd1	100	85.342	Mus_caroli
ENSODEG00000012095	SRBD1	100	82.012	ENSMUSG00000024135	Srbd1	99	84.184	Mus_musculus
ENSODEG00000012095	SRBD1	100	80.711	MGP_PahariEiJ_G0020924	Srbd1	100	80.711	Mus_pahari
ENSODEG00000012095	SRBD1	100	82.030	MGP_SPRETEiJ_G0022850	Srbd1	100	82.030	Mus_spretus
ENSODEG00000012095	SRBD1	100	83.333	ENSMLUG00000007039	SRBD1	100	83.333	Myotis_lucifugus
ENSODEG00000012095	SRBD1	100	81.953	ENSNGAG00000011893	Srbd1	100	81.953	Nannospalax_galili
ENSODEG00000012095	SRBD1	96	51.042	ENSNBRG00000012873	si:ch211-117n7.8	95	52.497	Neolamprologus_brichardi
ENSODEG00000012095	SRBD1	100	84.724	ENSNLEG00000016877	SRBD1	100	84.724	Nomascus_leucogenys
ENSODEG00000012095	SRBD1	95	52.311	ENSONIG00000000945	si:ch211-117n7.8	99	57.091	Oreochromis_niloticus
ENSODEG00000012095	SRBD1	100	87.790	ENSOCUG00000015385	SRBD1	100	88.093	Oryctolagus_cuniculus
ENSODEG00000012095	SRBD1	86	53.078	ENSORLG00000004427	si:ch211-117n7.8	84	53.078	Oryzias_latipes
ENSODEG00000012095	SRBD1	86	55.930	ENSORLG00020012792	si:ch211-117n7.8	84	55.800	Oryzias_latipes_hni
ENSODEG00000012095	SRBD1	86	55.749	ENSORLG00015018598	si:ch211-117n7.8	84	55.749	Oryzias_latipes_hsok
ENSODEG00000012095	SRBD1	95	51.805	ENSOMEG00000012229	si:ch211-117n7.8	91	55.351	Oryzias_melastigma
ENSODEG00000012095	SRBD1	100	80.201	ENSOGAG00000001076	SRBD1	100	80.704	Otolemur_garnettii
ENSODEG00000012095	SRBD1	100	81.438	ENSOARG00000005958	SRBD1	100	82.119	Ovis_aries
ENSODEG00000012095	SRBD1	100	84.623	ENSPPAG00000038442	SRBD1	100	85.025	Pan_paniscus
ENSODEG00000012095	SRBD1	100	87.035	ENSPPRG00000003449	SRBD1	100	87.035	Panthera_pardus
ENSODEG00000012095	SRBD1	100	87.136	ENSPTIG00000012495	SRBD1	100	87.136	Panthera_tigris_altaica
ENSODEG00000012095	SRBD1	100	84.523	ENSPTRG00000011889	SRBD1	100	84.925	Pan_troglodytes
ENSODEG00000012095	SRBD1	100	85.427	ENSPANG00000008063	SRBD1	100	85.427	Papio_anubis
ENSODEG00000012095	SRBD1	97	56.103	ENSPKIG00000021973	si:ch211-117n7.8	93	56.103	Paramormyrops_kingsleyae
ENSODEG00000012095	SRBD1	100	71.544	ENSPSIG00000008992	SRBD1	100	72.093	Pelodiscus_sinensis
ENSODEG00000012095	SRBD1	85	55.144	ENSPMGG00000013348	si:ch211-117n7.8	86	55.675	Periophthalmus_magnuspinnatus
ENSODEG00000012095	SRBD1	100	81.970	ENSPEMG00000020684	Srbd1	100	81.970	Peromyscus_maniculatus_bairdii
ENSODEG00000012095	SRBD1	97	53.138	ENSPFOG00000010650	si:ch211-117n7.8	94	53.138	Poecilia_formosa
ENSODEG00000012095	SRBD1	97	53.033	ENSPLAG00000002141	si:ch211-117n7.8	94	53.033	Poecilia_latipinna
ENSODEG00000012095	SRBD1	96	53.609	ENSPMEG00000018537	si:ch211-117n7.8	92	53.609	Poecilia_mexicana
ENSODEG00000012095	SRBD1	86	56.624	ENSPREG00000003258	si:ch211-117n7.8	87	56.624	Poecilia_reticulata
ENSODEG00000012095	SRBD1	100	78.977	ENSPPYG00000012444	SRBD1	99	78.977	Pongo_abelii
ENSODEG00000012095	SRBD1	82	81.561	ENSPCAG00000005629	SRBD1	86	81.561	Procavia_capensis
ENSODEG00000012095	SRBD1	100	74.449	ENSPCOG00000017669	SRBD1	100	74.449	Propithecus_coquereli
ENSODEG00000012095	SRBD1	94	87.220	ENSPVAG00000001782	SRBD1	97	87.220	Pteropus_vampyrus
ENSODEG00000012095	SRBD1	95	50.596	ENSPNYG00000000508	si:ch211-117n7.8	96	50.483	Pundamilia_nyererei
ENSODEG00000012095	SRBD1	96	57.037	ENSPNAG00000013492	SRBD1	95	57.354	Pygocentrus_nattereri
ENSODEG00000012095	SRBD1	100	80.793	ENSRNOG00000014720	Srbd1	99	81.098	Rattus_norvegicus
ENSODEG00000012095	SRBD1	99	84.995	ENSRBIG00000033486	SRBD1	99	84.995	Rhinopithecus_bieti
ENSODEG00000012095	SRBD1	99	84.995	ENSRROG00000041599	SRBD1	99	84.995	Rhinopithecus_roxellana
ENSODEG00000012095	SRBD1	100	84.623	ENSSBOG00000024982	SRBD1	100	84.623	Saimiri_boliviensis_boliviensis
ENSODEG00000012095	SRBD1	85	59.206	ENSSFOG00015001128	si:ch211-117n7.8	90	59.206	Scleropages_formosus
ENSODEG00000012095	SRBD1	85	57.228	ENSSMAG00000018256	si:ch211-117n7.8	82	57.569	Scophthalmus_maximus
ENSODEG00000012095	SRBD1	85	57.092	ENSSLDG00000023189	si:ch211-117n7.8	83	57.092	Seriola_lalandi_dorsalis
ENSODEG00000012095	SRBD1	100	77.213	ENSSARG00000009740	SRBD1	100	77.213	Sorex_araneus
ENSODEG00000012095	SRBD1	89	77.622	ENSSPUG00000010475	SRBD1	96	77.252	Sphenodon_punctatus
ENSODEG00000012095	SRBD1	86	55.795	ENSSPAG00000008092	-	94	52.077	Stegastes_partitus
ENSODEG00000012095	SRBD1	100	85.542	ENSSSCG00000008445	SRBD1	98	86.145	Sus_scrofa
ENSODEG00000012095	SRBD1	85	76.719	ENSTGUG00000003878	SRBD1	100	76.719	Taeniopygia_guttata
ENSODEG00000012095	SRBD1	86	56.722	ENSTRUG00000007080	si:ch211-117n7.8	93	56.840	Takifugu_rubripes
ENSODEG00000012095	SRBD1	99	49.314	ENSTNIG00000007464	si:ch211-117n7.8	99	49.314	Tetraodon_nigroviridis
ENSODEG00000012095	SRBD1	83	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSODEG00000012095	SRBD1	93	92.537	ENSTTRG00000011871	SRBD1	92	92.537	Tursiops_truncatus
ENSODEG00000012095	SRBD1	100	86.606	ENSUAMG00000008126	SRBD1	100	85.406	Ursus_americanus
ENSODEG00000012095	SRBD1	100	86.707	ENSUMAG00000012902	SRBD1	98	86.707	Ursus_maritimus
ENSODEG00000012095	SRBD1	91	89.135	ENSVPAG00000006825	SRBD1	99	89.135	Vicugna_pacos
ENSODEG00000012095	SRBD1	100	85.801	ENSVVUG00000005389	SRBD1	100	86.405	Vulpes_vulpes
ENSODEG00000012095	SRBD1	100	53.146	ENSXETG00000002760	srbd1	100	53.372	Xenopus_tropicalis
ENSODEG00000012095	SRBD1	96	52.910	ENSXMAG00000016861	si:ch211-117n7.8	92	52.910	Xiphophorus_maculatus