EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000012214 (Gene tree)
Gene ID: -
Gene Symbol: SRP72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 53812 bases
Position: chrJH651534.1:22472660-22526471
Accession: 101569944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016582	SRP72	PF08492.12	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016794	SRP72-201	1992	XM_004627582	ENSODEP00000016582	663 (aa)	XP_004627639	-

Gene Model

Click here to download ENSODEG00000012214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012214	SRP72	98	94.817	ENSG00000174780	SRP72	98	94.817	Homo_sapiens
ENSODEG00000012214	SRP72	99	62.146	ENSAPOG00000019438	srp72	96	62.171	Acanthochromis_polyacanthus
ENSODEG00000012214	SRP72	98	94.817	ENSAMEG00000008469	SRP72	97	94.817	Ailuropoda_melanoleuca
ENSODEG00000012214	SRP72	99	74.328	ENSACIG00000000488	srp72	96	74.149	Amphilophus_citrinellus
ENSODEG00000012214	SRP72	100	74.814	ENSAOCG00000011256	srp72	96	74.961	Amphiprion_ocellaris
ENSODEG00000012214	SRP72	100	74.814	ENSAPEG00000001512	srp72	96	74.961	Amphiprion_percula
ENSODEG00000012214	SRP72	91	75.896	ENSATEG00000006781	srp72	98	76.073	Anabas_testudineus
ENSODEG00000012214	SRP72	98	82.424	ENSAPLG00000008751	SRP72	96	81.832	Anas_platyrhynchos
ENSODEG00000012214	SRP72	96	84.235	ENSACAG00000002381	SRP72	93	85.624	Anolis_carolinensis
ENSODEG00000012214	SRP72	95	93.427	ENSANAG00000020836	-	100	96.259	Aotus_nancymaae
ENSODEG00000012214	SRP72	99	75.150	ENSACLG00000014617	srp72	93	77.419	Astatotilapia_calliptera
ENSODEG00000012214	SRP72	97	74.847	ENSAMXG00000004011	srp72	96	75.272	Astyanax_mexicanus
ENSODEG00000012214	SRP72	98	93.902	ENSBTAG00000010593	SRP72	98	93.902	Bos_taurus
ENSODEG00000012214	SRP72	98	93.598	ENSCJAG00000017998	SRP72	100	96.509	Callithrix_jacchus
ENSODEG00000012214	SRP72	98	94.970	ENSCAFG00000002244	SRP72	98	94.970	Canis_familiaris
ENSODEG00000012214	SRP72	98	94.970	ENSCAFG00020027338	SRP72	98	97.599	Canis_lupus_dingo
ENSODEG00000012214	SRP72	98	91.489	ENSCHIG00000021465	SRP72	98	91.489	Capra_hircus
ENSODEG00000012214	SRP72	96	95.216	ENSTSYG00000010571	-	95	95.194	Carlito_syrichta
ENSODEG00000012214	SRP72	75	97.938	ENSCAPG00000016668	SRP72	93	97.938	Cavia_aperea
ENSODEG00000012214	SRP72	100	95.536	ENSCPOG00000000218	SRP72	100	95.536	Cavia_porcellus
ENSODEG00000012214	SRP72	95	93.271	ENSCCAG00000030683	-	94	93.333	Cebus_capucinus
ENSODEG00000012214	SRP72	98	92.496	ENSCCAG00000030830	-	96	92.835	Cebus_capucinus
ENSODEG00000012214	SRP72	97	76.971	ENSCATG00000045359	-	94	76.682	Cercocebus_atys
ENSODEG00000012214	SRP72	98	94.665	ENSCATG00000008072	SRP72	98	94.665	Cercocebus_atys
ENSODEG00000012214	SRP72	100	95.982	ENSCLAG00000003571	SRP72	100	95.982	Chinchilla_lanigera
ENSODEG00000012214	SRP72	98	88.872	ENSCSAG00000005079	SRP72	98	88.872	Chlorocebus_sabaeus
ENSODEG00000012214	SRP72	90	88.430	ENSCHOG00000013240	SRP72	90	88.430	Choloepus_hoffmanni
ENSODEG00000012214	SRP72	95	85.782	ENSCPBG00000015015	SRP72	96	84.651	Chrysemys_picta_bellii
ENSODEG00000012214	SRP72	91	42.130	ENSCING00000002417	-	88	42.904	Ciona_intestinalis
ENSODEG00000012214	SRP72	94	41.069	ENSCSAVG00000011288	-	92	41.369	Ciona_savignyi
ENSODEG00000012214	SRP72	98	94.665	ENSCANG00000041709	SRP72	98	94.665	Colobus_angolensis_palliatus
ENSODEG00000012214	SRP72	92	78.088	ENSCANG00000037920	-	96	80.508	Colobus_angolensis_palliatus
ENSODEG00000012214	SRP72	100	93.899	ENSCGRG00001013548	Srp72	98	93.902	Cricetulus_griseus_chok1gshd
ENSODEG00000012214	SRP72	96	96.530	ENSCGRG00000003013	Srp72	99	96.530	Cricetulus_griseus_crigri
ENSODEG00000012214	SRP72	96	77.237	ENSCSEG00000003616	srp72	95	76.973	Cynoglossus_semilaevis
ENSODEG00000012214	SRP72	91	75.205	ENSCVAG00000001520	srp72	99	75.541	Cyprinodon_variegatus
ENSODEG00000012214	SRP72	86	76.491	ENSDARG00000014139	srp72	97	76.430	Danio_rerio
ENSODEG00000012214	SRP72	98	89.058	ENSDNOG00000039012	SRP72	81	89.362	Dasypus_novemcinctus
ENSODEG00000012214	SRP72	96	93.653	ENSDORG00000000171	Srp72	96	93.643	Dipodomys_ordii
ENSODEG00000012214	SRP72	89	41.304	FBgn0038810	Srp72	90	41.806	Drosophila_melanogaster
ENSODEG00000012214	SRP72	96	93.178	ENSETEG00000005191	SRP72	96	93.178	Echinops_telfairi
ENSODEG00000012214	SRP72	74	62.195	ENSEBUG00000003696	srp72	96	62.449	Eptatretus_burgeri
ENSODEG00000012214	SRP72	98	94.207	ENSEASG00005017747	SRP72	98	94.207	Equus_asinus_asinus
ENSODEG00000012214	SRP72	98	94.207	ENSECAG00000006920	SRP72	98	94.207	Equus_caballus
ENSODEG00000012214	SRP72	100	72.929	ENSELUG00000022415	srp72	96	75.327	Esox_lucius
ENSODEG00000012214	SRP72	96	94.599	ENSFCAG00000027600	SRP72	96	94.574	Felis_catus
ENSODEG00000012214	SRP72	96	84.914	ENSFALG00000006713	SRP72	96	84.006	Ficedula_albicollis
ENSODEG00000012214	SRP72	97	59.598	ENSFDAG00000009793	-	89	59.416	Fukomys_damarensis
ENSODEG00000012214	SRP72	100	95.238	ENSFDAG00000002014	-	100	95.238	Fukomys_damarensis
ENSODEG00000012214	SRP72	99	73.661	ENSFHEG00000017652	srp72	89	74.574	Fundulus_heteroclitus
ENSODEG00000012214	SRP72	97	70.444	ENSGMOG00000005986	srp72	95	70.827	Gadus_morhua
ENSODEG00000012214	SRP72	96	84.735	ENSGALG00000011403	SRP72	96	84.448	Gallus_gallus
ENSODEG00000012214	SRP72	99	74.589	ENSGAFG00000017762	srp72	96	74.766	Gambusia_affinis
ENSODEG00000012214	SRP72	99	72.917	ENSGACG00000016749	srp72	96	73.798	Gasterosteus_aculeatus
ENSODEG00000012214	SRP72	88	86.082	ENSGAGG00000024611	SRP72	96	86.874	Gopherus_agassizii
ENSODEG00000012214	SRP72	98	94.512	ENSGGOG00000013234	-	98	94.512	Gorilla_gorilla
ENSODEG00000012214	SRP72	99	75.299	ENSHBUG00000020723	srp72	96	75.155	Haplochromis_burtoni
ENSODEG00000012214	SRP72	89	88.127	ENSHGLG00000010633	-	97	88.978	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	86	86.087	ENSHGLG00000003950	-	97	86.087	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	97	74.264	ENSHGLG00000018597	-	95	75.000	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	98	94.665	ENSHGLG00000009791	SRP72	98	94.665	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	98	89.482	ENSHGLG00000005029	-	96	89.302	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	52	77.746	ENSHGLG00000003496	-	97	78.235	Heterocephalus_glaber_female
ENSODEG00000012214	SRP72	98	89.482	ENSHGLG00100011236	-	96	89.302	Heterocephalus_glaber_male
ENSODEG00000012214	SRP72	86	85.652	ENSHGLG00100017133	-	97	85.652	Heterocephalus_glaber_male
ENSODEG00000012214	SRP72	98	94.665	ENSHGLG00100009021	SRP72	98	94.665	Heterocephalus_glaber_male
ENSODEG00000012214	SRP72	98	58.118	ENSHGLG00100009346	-	95	68.266	Heterocephalus_glaber_male
ENSODEG00000012214	SRP72	100	75.261	ENSHCOG00000013760	srp72	96	75.739	Hippocampus_comes
ENSODEG00000012214	SRP72	100	74.069	ENSIPUG00000000210	srp72	94	75.475	Ictalurus_punctatus
ENSODEG00000012214	SRP72	100	95.536	ENSSTOG00000007305	SRP72	100	95.536	Ictidomys_tridecemlineatus
ENSODEG00000012214	SRP72	96	93.789	ENSJJAG00000018324	Srp72	96	93.789	Jaculus_jaculus
ENSODEG00000012214	SRP72	100	73.403	ENSKMAG00000003776	srp72	93	75.645	Kryptolebias_marmoratus
ENSODEG00000012214	SRP72	97	75.804	ENSLOCG00000002628	srp72	95	76.050	Lepisosteus_oculatus
ENSODEG00000012214	SRP72	98	93.902	ENSLAFG00000018307	SRP72	98	93.902	Loxodonta_africana
ENSODEG00000012214	SRP72	98	78.221	ENSMFAG00000037164	-	96	79.180	Macaca_fascicularis
ENSODEG00000012214	SRP72	98	94.512	ENSMFAG00000031065	SRP72	98	94.512	Macaca_fascicularis
ENSODEG00000012214	SRP72	94	71.222	ENSMMUG00000021262	-	94	70.921	Macaca_mulatta
ENSODEG00000012214	SRP72	98	94.545	ENSMMUG00000016368	SRP72	97	94.512	Macaca_mulatta
ENSODEG00000012214	SRP72	98	94.512	ENSMNEG00000038065	-	98	94.512	Macaca_nemestrina
ENSODEG00000012214	SRP72	95	92.958	ENSMLEG00000030140	-	94	92.381	Mandrillus_leucophaeus
ENSODEG00000012214	SRP72	99	74.516	ENSMAMG00000014989	srp72	85	74.458	Mastacembelus_armatus
ENSODEG00000012214	SRP72	99	75.299	ENSMZEG00005003325	srp72	93	77.419	Maylandia_zebra
ENSODEG00000012214	SRP72	96	82.992	ENSMGAG00000008567	SRP72	97	85.841	Meleagris_gallopavo
ENSODEG00000012214	SRP72	98	94.402	ENSMAUG00000001237	Srp72	96	94.419	Mesocricetus_auratus
ENSODEG00000012214	SRP72	95	93.114	ENSMICG00000008507	-	94	93.175	Microcebus_murinus
ENSODEG00000012214	SRP72	100	93.899	ENSMOCG00000020309	Srp72	98	93.902	Microtus_ochrogaster
ENSODEG00000012214	SRP72	100	72.619	ENSMMOG00000002627	srp72	93	75.161	Mola_mola
ENSODEG00000012214	SRP72	96	84.112	ENSMODG00000020697	SRP72	98	84.122	Monodelphis_domestica
ENSODEG00000012214	SRP72	99	74.251	ENSMALG00000003747	srp72	97	76.061	Monopterus_albus
ENSODEG00000012214	SRP72	100	93.155	MGP_CAROLIEiJ_G0027323	Srp72	98	93.140	Mus_caroli
ENSODEG00000012214	SRP72	100	93.155	ENSMUSG00000036323	Srp72	98	93.140	Mus_musculus
ENSODEG00000012214	SRP72	99	93.675	MGP_PahariEiJ_G0017103	Srp72	96	93.643	Mus_pahari
ENSODEG00000012214	SRP72	100	93.155	MGP_SPRETEiJ_G0028317	Srp72	98	93.140	Mus_spretus
ENSODEG00000012214	SRP72	96	95.031	ENSMPUG00000004828	SRP72	98	94.817	Mustela_putorius_furo
ENSODEG00000012214	SRP72	96	93.653	ENSMLUG00000007344	SRP72	96	93.653	Myotis_lucifugus
ENSODEG00000012214	SRP72	100	93.601	ENSNGAG00000012595	Srp72	100	96.734	Nannospalax_galili
ENSODEG00000012214	SRP72	99	72.006	ENSNBRG00000014492	srp72	96	71.739	Neolamprologus_brichardi
ENSODEG00000012214	SRP72	97	88.397	ENSNLEG00000008806	-	100	86.783	Nomascus_leucogenys
ENSODEG00000012214	SRP72	98	77.321	ENSMEUG00000005164	SRP72	86	94.681	Notamacropus_eugenii
ENSODEG00000012214	SRP72	96	92.846	ENSOPRG00000012521	SRP72	98	92.530	Ochotona_princeps
ENSODEG00000012214	SRP72	99	75.112	ENSONIG00000001446	srp72	96	75.155	Oreochromis_niloticus
ENSODEG00000012214	SRP72	96	69.219	ENSOANG00000008562	SRP72	95	69.231	Ornithorhynchus_anatinus
ENSODEG00000012214	SRP72	97	94.656	ENSOCUG00000012226	SRP72	97	94.656	Oryctolagus_cuniculus
ENSODEG00000012214	SRP72	100	72.131	ENSORLG00000020418	srp72	96	73.095	Oryzias_latipes
ENSODEG00000012214	SRP72	100	71.833	ENSORLG00020009138	srp72	95	71.851	Oryzias_latipes_hni
ENSODEG00000012214	SRP72	100	71.535	ENSORLG00015018251	srp72	96	72.473	Oryzias_latipes_hsok
ENSODEG00000012214	SRP72	100	72.578	ENSOMEG00000022008	srp72	96	72.939	Oryzias_melastigma
ENSODEG00000012214	SRP72	98	94.665	ENSOGAG00000003578	SRP72	98	94.665	Otolemur_garnettii
ENSODEG00000012214	SRP72	98	94.055	ENSOARG00000004329	SRP72	98	94.055	Ovis_aries
ENSODEG00000012214	SRP72	98	94.817	ENSPPAG00000042265	SRP72	98	94.817	Pan_paniscus
ENSODEG00000012214	SRP72	98	67.873	ENSPPAG00000011428	-	93	69.255	Pan_paniscus
ENSODEG00000012214	SRP72	81	76.866	ENSPPAG00000032490	-	91	75.926	Pan_paniscus
ENSODEG00000012214	SRP72	98	94.665	ENSPPRG00000015991	SRP72	98	94.665	Panthera_pardus
ENSODEG00000012214	SRP72	98	94.665	ENSPTIG00000018786	SRP72	98	94.665	Panthera_tigris_altaica
ENSODEG00000012214	SRP72	98	94.817	ENSPTRG00000048466	-	98	94.817	Pan_troglodytes
ENSODEG00000012214	SRP72	98	70.045	ENSPTRG00000048100	-	93	71.739	Pan_troglodytes
ENSODEG00000012214	SRP72	81	76.679	ENSPTRG00000043609	-	91	75.646	Pan_troglodytes
ENSODEG00000012214	SRP72	94	76.800	ENSPANG00000030230	-	96	77.097	Papio_anubis
ENSODEG00000012214	SRP72	98	94.665	ENSPANG00000005495	SRP72	98	94.665	Papio_anubis
ENSODEG00000012214	SRP72	93	87.419	ENSPSIG00000003003	SRP72	97	87.419	Pelodiscus_sinensis
ENSODEG00000012214	SRP72	98	93.646	ENSPEMG00000012828	-	96	93.643	Peromyscus_maniculatus_bairdii
ENSODEG00000012214	SRP72	96	88.390	ENSPCIG00000000732	SRP72	95	88.491	Phascolarctos_cinereus
ENSODEG00000012214	SRP72	99	74.888	ENSPFOG00000003480	srp72	96	75.312	Poecilia_formosa
ENSODEG00000012214	SRP72	99	74.888	ENSPLAG00000020122	srp72	96	75.312	Poecilia_latipinna
ENSODEG00000012214	SRP72	99	74.589	ENSPMEG00000019988	srp72	96	75.000	Poecilia_mexicana
ENSODEG00000012214	SRP72	99	74.589	ENSPREG00000006218	srp72	96	75.000	Poecilia_reticulata
ENSODEG00000012214	SRP72	98	94.817	ENSPPYG00000014752	-	76	94.817	Pongo_abelii
ENSODEG00000012214	SRP72	57	81.152	ENSPPYG00000009152	-	95	79.843	Pongo_abelii
ENSODEG00000012214	SRP72	98	92.835	ENSPVAG00000005590	SRP72	98	92.835	Pteropus_vampyrus
ENSODEG00000012214	SRP72	99	75.599	ENSPNYG00000001916	srp72	96	75.466	Pundamilia_nyererei
ENSODEG00000012214	SRP72	99	74.813	ENSPNAG00000022424	srp72	94	76.108	Pygocentrus_nattereri
ENSODEG00000012214	SRP72	100	90.923	ENSRNOG00000002100	LOC108348180	98	91.463	Rattus_norvegicus
ENSODEG00000012214	SRP72	98	88.333	ENSRBIG00000042069	SRP72	96	91.346	Rhinopithecus_bieti
ENSODEG00000012214	SRP72	98	74.203	ENSRBIG00000029328	-	96	74.648	Rhinopithecus_bieti
ENSODEG00000012214	SRP72	98	94.665	ENSRROG00000035704	SRP72	98	94.665	Rhinopithecus_roxellana
ENSODEG00000012214	SRP72	94	90.369	ENSSHAG00000000614	SRP72	92	90.369	Sarcophilus_harrisii
ENSODEG00000012214	SRP72	99	76.347	ENSSFOG00015002026	srp72	96	76.398	Scleropages_formosus
ENSODEG00000012214	SRP72	99	73.244	ENSSMAG00000007639	srp72	96	73.416	Scophthalmus_maximus
ENSODEG00000012214	SRP72	99	75.075	ENSSDUG00000007345	srp72	95	75.776	Seriola_dumerili
ENSODEG00000012214	SRP72	99	74.814	ENSSLDG00000021819	srp72	97	75.155	Seriola_lalandi_dorsalis
ENSODEG00000012214	SRP72	74	93.158	ENSSARG00000005804	SRP72	63	97.561	Sorex_araneus
ENSODEG00000012214	SRP72	96	85.047	ENSSPUG00000009740	SRP72	96	84.914	Sphenodon_punctatus
ENSODEG00000012214	SRP72	99	74.551	ENSSPAG00000011565	srp72	96	75.311	Stegastes_partitus
ENSODEG00000012214	SRP72	99	91.114	ENSSSCG00000008900	SRP72	96	91.318	Sus_scrofa
ENSODEG00000012214	SRP72	96	84.783	ENSTGUG00000004767	SRP72	96	83.876	Taeniopygia_guttata
ENSODEG00000012214	SRP72	99	73.913	ENSTRUG00000009831	srp72	96	74.184	Takifugu_rubripes
ENSODEG00000012214	SRP72	99	75.789	ENSTNIG00000013073	srp72	96	75.621	Tetraodon_nigroviridis
ENSODEG00000012214	SRP72	90	76.483	ENSTBEG00000007394	SRP72	87	76.483	Tupaia_belangeri
ENSODEG00000012214	SRP72	93	96.117	ENSTTRG00000010945	SRP72	97	96.117	Tursiops_truncatus
ENSODEG00000012214	SRP72	60	98.237	ENSUAMG00000001701	SRP72	100	98.158	Ursus_americanus
ENSODEG00000012214	SRP72	98	94.817	ENSUMAG00000008151	SRP72	98	94.817	Ursus_maritimus
ENSODEG00000012214	SRP72	98	92.378	ENSVPAG00000000458	SRP72	98	92.378	Vicugna_pacos
ENSODEG00000012214	SRP72	100	95.238	ENSVVUG00000006020	SRP72	100	95.238	Vulpes_vulpes
ENSODEG00000012214	SRP72	96	79.278	ENSXETG00000010205	srp72	97	78.905	Xenopus_tropicalis
ENSODEG00000012214	SRP72	99	74.141	ENSXMAG00000018000	srp72	95	74.531	Xiphophorus_maculatus