EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000012319 (Gene tree)
Gene ID: 101584308
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 32153 bases
Position: chrJH651516.1:3259309-3291461
Accession: 101584308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016727	zf-CCHC_2	PF13696.6	3.2e-09	1	1
ENSODEP00000016726	zf-CCHC_2	PF13696.6	3.3e-09	1	1
ENSODEP00000016727	zf-CCHC	PF00098.23	7.1e-05	1	1
ENSODEP00000016726	zf-CCHC	PF00098.23	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000016940	RBBP6-203	372	-	ENSODEP00000016728	123 (aa)	-	-
ENSODET00000016939	RBBP6-202	5256	-	ENSODEP00000016727	1751 (aa)	-	-
ENSODET00000016938	RBBP6-201	5358	XM_004623125	ENSODEP00000016726	1785 (aa)	XP_004623182	-

Gene Model

Click here to download ENSODEG00000012319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012319	RBBP6	96	86.838	ENSG00000122257	RBBP6	97	99.254	Homo_sapiens
ENSODEG00000012319	RBBP6	94	85.000	ENSAMEG00000009312	RBBP6	94	85.317	Ailuropoda_melanoleuca
ENSODEG00000012319	RBBP6	96	86.430	ENSANAG00000037384	RBBP6	88	93.023	Aotus_nancymaae
ENSODEG00000012319	RBBP6	96	86.181	ENSCJAG00000020661	RBBP6	88	93.023	Callithrix_jacchus
ENSODEG00000012319	RBBP6	96	84.986	ENSCAFG00000017566	RBBP6	98	85.383	Canis_familiaris
ENSODEG00000012319	RBBP6	94	87.026	ENSTSYG00000000822	RBBP6	88	93.519	Carlito_syrichta
ENSODEG00000012319	RBBP6	87	85.440	ENSCAPG00000012399	RBBP6	92	85.899	Cavia_aperea
ENSODEG00000012319	RBBP6	96	86.022	ENSCCAG00000023229	RBBP6	88	93.287	Cebus_capucinus
ENSODEG00000012319	RBBP6	96	86.488	ENSCATG00000033601	RBBP6	88	93.287	Cercocebus_atys
ENSODEG00000012319	RBBP6	94	89.489	ENSCLAG00000009872	RBBP6	94	89.756	Chinchilla_lanigera
ENSODEG00000012319	RBBP6	63	93.548	ENSCHOG00000000278	RBBP6	62	93.519	Choloepus_hoffmanni
ENSODEG00000012319	RBBP6	89	77.159	ENSCPBG00000001818	RBBP6	93	77.351	Chrysemys_picta_bellii
ENSODEG00000012319	RBBP6	96	84.665	ENSCANG00000039613	RBBP6	88	93.519	Colobus_angolensis_palliatus
ENSODEG00000012319	RBBP6	96	86.213	ENSDORG00000010285	Rbbp6	95	86.528	Dipodomys_ordii
ENSODEG00000012319	RBBP6	92	87.979	ENSEEUG00000001683	RBBP6	95	88.538	Erinaceus_europaeus
ENSODEG00000012319	RBBP6	94	86.895	ENSFCAG00000043694	RBBP6	88	93.519	Felis_catus
ENSODEG00000012319	RBBP6	94	89.040	ENSFDAG00000013132	RBBP6	89	85.205	Fukomys_damarensis
ENSODEG00000012319	RBBP6	86	76.527	ENSGALG00000006043	RBBP6	85	75.856	Gallus_gallus
ENSODEG00000012319	RBBP6	89	77.543	ENSGAGG00000004371	RBBP6	93	77.927	Gopherus_agassizii
ENSODEG00000012319	RBBP6	96	86.546	ENSGGOG00000007137	RBBP6	88	93.519	Gorilla_gorilla
ENSODEG00000012319	RBBP6	94	87.137	ENSHGLG00000008327	RBBP6	93	87.262	Heterocephalus_glaber_female
ENSODEG00000012319	RBBP6	96	91.162	ENSHGLG00100007773	RBBP6	85	89.150	Heterocephalus_glaber_male
ENSODEG00000012319	RBBP6	94	87.026	ENSSTOG00000016006	RBBP6	94	87.388	Ictidomys_tridecemlineatus
ENSODEG00000012319	RBBP6	94	84.538	ENSJJAG00000014549	Rbbp6	94	85.247	Jaculus_jaculus
ENSODEG00000012319	RBBP6	95	47.993	ENSLOCG00000005487	RBBP6	94	52.747	Lepisosteus_oculatus
ENSODEG00000012319	RBBP6	96	86.538	ENSMFAG00000038627	RBBP6	88	93.519	Macaca_fascicularis
ENSODEG00000012319	RBBP6	96	86.480	ENSMMUG00000015908	RBBP6	88	93.519	Macaca_mulatta
ENSODEG00000012319	RBBP6	96	86.546	ENSMNEG00000033630	RBBP6	88	93.519	Macaca_nemestrina
ENSODEG00000012319	RBBP6	96	86.546	ENSMLEG00000030073	RBBP6	88	93.519	Mandrillus_leucophaeus
ENSODEG00000012319	RBBP6	94	86.967	ENSMICG00000008059	RBBP6	88	93.750	Microcebus_murinus
ENSODEG00000012319	RBBP6	94	75.085	ENSMODG00000016318	-	94	75.099	Monodelphis_domestica
ENSODEG00000012319	RBBP6	67	93.407	MGP_CAROLIEiJ_G0030424	-	100	94.545	Mus_caroli
ENSODEG00000012319	RBBP6	94	84.301	ENSMUSG00000030779	Rbbp6	97	82.664	Mus_musculus
ENSODEG00000012319	RBBP6	94	84.064	MGP_SPRETEiJ_G0031538	Rbbp6	94	83.971	Mus_spretus
ENSODEG00000012319	RBBP6	94	85.148	ENSMLUG00000010601	-	94	85.485	Myotis_lucifugus
ENSODEG00000012319	RBBP6	91	93.506	ENSNLEG00000011896	RBBP6	88	93.519	Nomascus_leucogenys
ENSODEG00000012319	RBBP6	84	78.459	ENSMEUG00000014491	RBBP6	84	78.223	Notamacropus_eugenii
ENSODEG00000012319	RBBP6	58	97.740	ENSOPRG00000016272	RBBP6	58	97.661	Ochotona_princeps
ENSODEG00000012319	RBBP6	94	74.686	ENSOANG00000007673	RBBP6	94	74.986	Ornithorhynchus_anatinus
ENSODEG00000012319	RBBP6	96	87.211	ENSOCUG00000004346	RBBP6	96	84.007	Oryctolagus_cuniculus
ENSODEG00000012319	RBBP6	94	86.836	ENSPPRG00000004074	RBBP6	88	93.287	Panthera_pardus
ENSODEG00000012319	RBBP6	94	86.895	ENSPTIG00000010342	RBBP6	88	93.287	Panthera_tigris_altaica
ENSODEG00000012319	RBBP6	96	86.605	ENSPTRG00000007897	RBBP6	88	93.750	Pan_troglodytes
ENSODEG00000012319	RBBP6	96	86.663	ENSPANG00000019625	RBBP6	88	93.750	Papio_anubis
ENSODEG00000012319	RBBP6	94	78.162	ENSPCIG00000014000	RBBP6	94	78.131	Phascolarctos_cinereus
ENSODEG00000012319	RBBP6	94	87.145	ENSPCOG00000021939	RBBP6	88	93.519	Propithecus_coquereli
ENSODEG00000012319	RBBP6	84	89.093	ENSPVAG00000001110	RBBP6	81	89.399	Pteropus_vampyrus
ENSODEG00000012319	RBBP6	96	87.946	ENSRBIG00000004517	RBBP6	94	89.601	Rhinopithecus_bieti
ENSODEG00000012319	RBBP6	96	86.372	ENSRROG00000032092	RBBP6	88	93.519	Rhinopithecus_roxellana
ENSODEG00000012319	RBBP6	96	86.472	ENSSBOG00000021666	RBBP6	88	93.023	Saimiri_boliviensis_boliviensis
ENSODEG00000012319	RBBP6	86	93.202	ENSSARG00000004977	RBBP6	93	83.061	Sorex_araneus
ENSODEG00000012319	RBBP6	94	84.988	ENSTTRG00000002696	RBBP6	94	85.223	Tursiops_truncatus
ENSODEG00000012319	RBBP6	94	85.233	ENSUMAG00000008537	RBBP6	94	85.553	Ursus_maritimus
ENSODEG00000012319	RBBP6	66	89.357	ENSVPAG00000006458	RBBP6	79	89.357	Vicugna_pacos