EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012386 (Gene tree)
Gene ID: -
Gene Symbol: CSTF2T
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1812 bases
Position: chrJH651520.1:1673599-1675410
Accession: 101572848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000016812	RRM_1	PF00076.22	3.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017024	CSTF2T-201	1788	XM_004623944	ENSODEP00000016812	595 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012386	CSTF2T	99	69.417	ENSODEG00000002059	CSTF2	99	69.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012386	CSTF2T	100	83.906	ENSG00000177613	CSTF2T	100	84.062	Homo_sapiens
ENSODEG00000012386	CSTF2T	100	80.125	ENSAMEG00000015766	CSTF2T	100	80.438	Ailuropoda_melanoleuca
ENSODEG00000012386	CSTF2T	59	77.904	ENSANAG00000027508	-	89	79.096	Aotus_nancymaae
ENSODEG00000012386	CSTF2T	100	78.614	ENSBTAG00000018406	CSTF2T	100	79.066	Bos_taurus
ENSODEG00000012386	CSTF2T	59	77.904	ENSCJAG00000011554	-	97	78.754	Callithrix_jacchus
ENSODEG00000012386	CSTF2T	62	67.655	ENSCJAG00000039083	-	95	70.889	Callithrix_jacchus
ENSODEG00000012386	CSTF2T	87	88.636	ENSCAFG00000015567	CSTF2T	99	88.636	Canis_familiaris
ENSODEG00000012386	CSTF2T	97	100.000	ENSCAFG00020026426	CSTF2T	80	80.627	Canis_lupus_dingo
ENSODEG00000012386	CSTF2T	100	78.387	ENSCHIG00000016590	CSTF2T	100	77.017	Capra_hircus
ENSODEG00000012386	CSTF2T	100	83.596	ENSTSYG00000007750	CSTF2T	100	84.227	Carlito_syrichta
ENSODEG00000012386	CSTF2T	100	89.030	ENSCPOG00000004195	CSTF2T	100	90.256	Cavia_porcellus
ENSODEG00000012386	CSTF2T	59	76.204	ENSCCAG00000020816	-	87	79.320	Cebus_capucinus
ENSODEG00000012386	CSTF2T	59	77.054	ENSCATG00000041868	-	95	79.037	Cercocebus_atys
ENSODEG00000012386	CSTF2T	100	86.895	ENSCLAG00000017916	CSTF2T	100	88.144	Chinchilla_lanigera
ENSODEG00000012386	CSTF2T	100	83.750	ENSCSAG00000018437	CSTF2T	100	84.375	Chlorocebus_sabaeus
ENSODEG00000012386	CSTF2T	69	88.462	ENSCHOG00000011888	-	68	88.462	Choloepus_hoffmanni
ENSODEG00000012386	CSTF2T	58	75.862	ENSCANG00000005843	-	92	79.023	Colobus_angolensis_palliatus
ENSODEG00000012386	CSTF2T	100	79.755	ENSCGRG00001003222	Cstf2t	100	80.828	Cricetulus_griseus_chok1gshd
ENSODEG00000012386	CSTF2T	100	80.184	ENSCGRG00000008682	Cstf2t	100	81.720	Cricetulus_griseus_crigri
ENSODEG00000012386	CSTF2T	100	80.469	ENSDNOG00000003283	CSTF2T	100	81.094	Dasypus_novemcinctus
ENSODEG00000012386	CSTF2T	98	95.385	ENSDORG00000011245	Cstf2t	100	81.164	Dipodomys_ordii
ENSODEG00000012386	CSTF2T	100	82.143	ENSEASG00005012929	CSTF2T	100	82.143	Equus_asinus_asinus
ENSODEG00000012386	CSTF2T	100	81.202	ENSECAG00000004701	CSTF2T	100	81.202	Equus_caballus
ENSODEG00000012386	CSTF2T	76	87.560	ENSELUG00000004079	-	73	88.660	Esox_lucius
ENSODEG00000012386	CSTF2T	100	81.690	ENSFCAG00000046300	CSTF2T	100	83.255	Felis_catus
ENSODEG00000012386	CSTF2T	100	82.542	ENSFDAG00000021170	CSTF2T	100	86.217	Fukomys_damarensis
ENSODEG00000012386	CSTF2T	100	84.762	ENSGGOG00000036416	-	100	84.921	Gorilla_gorilla
ENSODEG00000012386	CSTF2T	100	84.762	ENSGGOG00000042388	-	100	84.921	Gorilla_gorilla
ENSODEG00000012386	CSTF2T	100	83.461	ENSHGLG00000015478	CSTF2T	100	85.758	Heterocephalus_glaber_female
ENSODEG00000012386	CSTF2T	100	83.792	ENSHGLG00100000336	CSTF2T	100	85.627	Heterocephalus_glaber_male
ENSODEG00000012386	CSTF2T	100	82.965	ENSSTOG00000026303	CSTF2T	100	85.174	Ictidomys_tridecemlineatus
ENSODEG00000012386	CSTF2T	100	84.603	ENSLAFG00000002058	CSTF2T	100	85.265	Loxodonta_africana
ENSODEG00000012386	CSTF2T	58	77.551	ENSMFAG00000042009	-	96	79.592	Macaca_fascicularis
ENSODEG00000012386	CSTF2T	59	76.554	ENSMMUG00000042906	-	99	78.531	Macaca_mulatta
ENSODEG00000012386	CSTF2T	58	77.551	ENSMNEG00000031410	-	96	79.592	Macaca_nemestrina
ENSODEG00000012386	CSTF2T	100	83.648	ENSMAUG00000006359	Cstf2t	100	84.748	Mesocricetus_auratus
ENSODEG00000012386	CSTF2T	100	77.538	ENSMICG00000030551	-	100	82.232	Microcebus_murinus
ENSODEG00000012386	CSTF2T	100	84.921	ENSMICG00000000867	-	100	85.512	Microcebus_murinus
ENSODEG00000012386	CSTF2T	100	80.740	ENSMOCG00000020428	Cstf2t	100	82.126	Microtus_ochrogaster
ENSODEG00000012386	CSTF2T	74	91.327	ENSMALG00000008842	-	97	57.119	Monopterus_albus
ENSODEG00000012386	CSTF2T	100	80.685	MGP_CAROLIEiJ_G0022872	Cstf2t	100	83.333	Mus_caroli
ENSODEG00000012386	CSTF2T	100	79.570	ENSMUSG00000053536	Cstf2t	100	81.874	Mus_musculus
ENSODEG00000012386	CSTF2T	100	81.106	MGP_PahariEiJ_G0014365	Cstf2t	100	81.260	Mus_pahari
ENSODEG00000012386	CSTF2T	100	79.877	MGP_SPRETEiJ_G0023790	Cstf2t	100	81.874	Mus_spretus
ENSODEG00000012386	CSTF2T	100	83.307	ENSMPUG00000020141	CSTF2T	100	85.056	Mustela_putorius_furo
ENSODEG00000012386	CSTF2T	100	78.115	ENSMLUG00000027140	-	100	78.275	Myotis_lucifugus
ENSODEG00000012386	CSTF2T	100	75.075	ENSMLUG00000011187	-	100	75.189	Myotis_lucifugus
ENSODEG00000012386	CSTF2T	100	83.281	ENSNGAG00000003304	Cstf2t	100	84.543	Nannospalax_galili
ENSODEG00000012386	CSTF2T	100	81.191	ENSNLEG00000012025	CSTF2T	100	81.818	Nomascus_leucogenys
ENSODEG00000012386	CSTF2T	100	81.126	ENSOCUG00000004647	-	100	81.126	Oryctolagus_cuniculus
ENSODEG00000012386	CSTF2T	100	85.056	ENSOGAG00000014565	CSTF2T	100	85.851	Otolemur_garnettii
ENSODEG00000012386	CSTF2T	100	79.695	ENSOARG00000019124	-	100	79.847	Ovis_aries
ENSODEG00000012386	CSTF2T	100	78.163	ENSOARG00000013688	-	81	85.083	Ovis_aries
ENSODEG00000012386	CSTF2T	58	76.149	ENSPPAG00000032242	-	96	78.161	Pan_paniscus
ENSODEG00000012386	CSTF2T	100	81.847	ENSPPRG00000018659	CSTF2T	100	83.099	Panthera_pardus
ENSODEG00000012386	CSTF2T	56	79.144	ENSPTIG00000021145	CSTF2T	100	81.289	Panthera_tigris_altaica
ENSODEG00000012386	CSTF2T	58	76.149	ENSPTRG00000043097	-	96	78.161	Pan_troglodytes
ENSODEG00000012386	CSTF2T	58	77.551	ENSPANG00000029734	-	96	79.592	Papio_anubis
ENSODEG00000012386	CSTF2T	62	59.836	ENSPFOG00000016756	CSTF2T	93	62.873	Poecilia_formosa
ENSODEG00000012386	CSTF2T	100	82.636	ENSPPYG00000002441	CSTF2T	100	83.566	Pongo_abelii
ENSODEG00000012386	CSTF2T	100	81.406	ENSPCAG00000000046	CSTF2T	100	82.656	Procavia_capensis
ENSODEG00000012386	CSTF2T	99	84.420	ENSPCOG00000010982	CSTF2T	99	86.010	Propithecus_coquereli
ENSODEG00000012386	CSTF2T	100	84.420	ENSPVAG00000006274	CSTF2T	100	84.738	Pteropus_vampyrus
ENSODEG00000012386	CSTF2T	100	80.715	ENSRNOG00000050289	Cstf2t	100	81.649	Rattus_norvegicus
ENSODEG00000012386	CSTF2T	100	84.094	ENSRBIG00000029324	CSTF2T	100	84.252	Rhinopithecus_bieti
ENSODEG00000012386	CSTF2T	100	84.252	ENSRROG00000042507	CSTF2T	100	84.409	Rhinopithecus_roxellana
ENSODEG00000012386	CSTF2T	100	83.438	ENSSBOG00000022638	CSTF2T	100	84.700	Saimiri_boliviensis_boliviensis
ENSODEG00000012386	CSTF2T	74	91.327	ENSSDUG00000001049	-	97	56.699	Seriola_dumerili
ENSODEG00000012386	CSTF2T	74	91.327	ENSSLDG00000010056	-	97	56.699	Seriola_lalandi_dorsalis
ENSODEG00000012386	CSTF2T	87	86.232	ENSSARG00000002013	-	87	86.594	Sorex_araneus
ENSODEG00000012386	CSTF2T	74	90.816	ENSSPAG00000009247	-	96	55.099	Stegastes_partitus
ENSODEG00000012386	CSTF2T	100	82.629	ENSSSCG00000010430	CSTF2T	100	84.038	Sus_scrofa
ENSODEG00000012386	CSTF2T	74	90.256	ENSTRUG00000004323	-	96	53.719	Takifugu_rubripes
ENSODEG00000012386	CSTF2T	100	71.362	ENSTBEG00000014379	CSTF2T	100	72.770	Tupaia_belangeri
ENSODEG00000012386	CSTF2T	100	82.316	ENSTTRG00000003341	CSTF2T	100	83.412	Tursiops_truncatus
ENSODEG00000012386	CSTF2T	100	78.614	ENSUMAG00000011141	CSTF2T	100	79.819	Ursus_maritimus
ENSODEG00000012386	CSTF2T	61	95.522	ENSVVUG00000002575	CSTF2T	90	93.897	Vulpes_vulpes