EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012634 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 3436 bases
Position: chrJH651547.1:3464570-3468005
Accession: 101579413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017148	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017365	-	410	XM_012514418	ENSODEP00000017148	127 (aa)	XP_012369872	-

Gene Model

Click here to download ENSODEG00000012634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012634's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012634	-	98	45.669	ENSODEG00000002979	RAB33B	55	45.669
ENSODEG00000012634	-	94	39.024	ENSODEG00000002835	RAB7A	75	39.024
ENSODEG00000012634	-	92	44.444	ENSODEG00000000290	-	79	44.444
ENSODEG00000012634	-	99	30.714	ENSODEG00000006629	ARFRP1	67	30.714
ENSODEG00000012634	-	93	36.290	ENSODEG00000019004	RAB9A	61	36.290
ENSODEG00000012634	-	95	56.198	ENSODEG00000006414	RAB12	57	54.400
ENSODEG00000012634	-	98	46.774	ENSODEG00000016788	-	63	46.774
ENSODEG00000012634	-	94	39.837	ENSODEG00000019065	-	63	39.837
ENSODEG00000012634	-	93	30.252	ENSODEG00000011800	ARF5	63	30.252
ENSODEG00000012634	-	92	45.299	ENSODEG00000005942	RAB6A	56	45.299
ENSODEG00000012634	-	92	33.898	ENSODEG00000009963	RHEB	64	33.898
ENSODEG00000012634	-	98	30.952	ENSODEG00000008389	ARL3	66	30.952
ENSODEG00000012634	-	93	49.167	ENSODEG00000011726	RAB33A	51	49.167
ENSODEG00000012634	-	97	44.715	ENSODEG00000002013	RAB14	57	44.715
ENSODEG00000012634	-	100	98.425	ENSODEG00000010443	-	63	98.425
ENSODEG00000012634	-	99	46.875	ENSODEG00000000520	RAB39B	60	46.875
ENSODEG00000012634	-	97	48.780	ENSODEG00000001343	RAB2B	57	48.780
ENSODEG00000012634	-	99	34.375	ENSODEG00000009994	RERG	62	34.375
ENSODEG00000012634	-	92	42.735	ENSODEG00000017920	RAB5C	54	42.735
ENSODEG00000012634	-	92	35.593	ENSODEG00000018151	MRAS	56	35.593
ENSODEG00000012634	-	94	35.833	ENSODEG00000010412	KRAS	63	35.833
ENSODEG00000012634	-	88	64.286	ENSODEG00000011248	-	58	65.217
ENSODEG00000012634	-	98	48.387	ENSODEG00000002369	-	58	48.387
ENSODEG00000012634	-	93	47.059	ENSODEG00000004150	-	58	47.059
ENSODEG00000012634	-	98	63.200	ENSODEG00000017847	-	62	63.200
ENSODEG00000012634	-	95	52.066	ENSODEG00000011371	RAB11B	56	52.066
ENSODEG00000012634	-	89	36.842	ENSODEG00000010425	RAB24	57	36.752
ENSODEG00000012634	-	92	41.880	ENSODEG00000000054	RAB22A	60	41.880
ENSODEG00000012634	-	99	57.937	ENSODEG00000013827	RAB15	59	57.937
ENSODEG00000012634	-	94	36.667	ENSODEG00000015703	HRAS	64	36.667
ENSODEG00000012634	-	98	61.290	ENSODEG00000007219	RAB35	61	61.290
ENSODEG00000012634	-	95	52.066	ENSODEG00000016878	-	56	52.066
ENSODEG00000012634	-	95	34.711	ENSODEG00000015650	-	54	34.711
ENSODEG00000012634	-	92	42.735	ENSODEG00000003860	RAB5B	54	42.735
ENSODEG00000012634	-	93	35.294	ENSODEG00000007937	NRAS	62	35.294
ENSODEG00000012634	-	95	45.455	ENSODEG00000009908	RAB25	57	45.455
ENSODEG00000012634	-	95	54.545	ENSODEG00000003833	RAB30	60	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012634	-	100	97.638	ENSG00000143545	RAB13	63	97.638	Homo_sapiens
ENSODEG00000012634	-	100	88.976	ENSACIG00000008584	rab13	61	88.976	Amphilophus_citrinellus
ENSODEG00000012634	-	100	98.425	ENSANAG00000030247	-	63	98.425	Aotus_nancymaae
ENSODEG00000012634	-	100	89.764	ENSAMXG00000030712	rab13	63	89.764	Astyanax_mexicanus
ENSODEG00000012634	-	100	97.638	ENSBTAG00000017604	RAB13	63	97.638	Bos_taurus
ENSODEG00000012634	-	97	47.581	WBGene00019317	K02E10.1	57	47.581	Caenorhabditis_elegans
ENSODEG00000012634	-	100	97.638	ENSCJAG00000009933	-	63	97.638	Callithrix_jacchus
ENSODEG00000012634	-	100	97.638	ENSCHIG00000022271	-	63	97.638	Capra_hircus
ENSODEG00000012634	-	100	99.213	ENSCPOG00000011491	-	63	99.213	Cavia_porcellus
ENSODEG00000012634	-	100	97.638	ENSCCAG00000028502	-	63	97.638	Cebus_capucinus
ENSODEG00000012634	-	100	97.638	ENSCATG00000041779	-	63	97.638	Cercocebus_atys
ENSODEG00000012634	-	100	99.213	ENSCLAG00000006603	-	63	99.213	Chinchilla_lanigera
ENSODEG00000012634	-	100	97.638	ENSCANG00000036573	-	63	97.638	Colobus_angolensis_palliatus
ENSODEG00000012634	-	100	96.063	ENSCGRG00001021505	Rab13	63	96.063	Cricetulus_griseus_chok1gshd
ENSODEG00000012634	-	100	96.063	ENSCGRG00000012126	Rab13	63	96.063	Cricetulus_griseus_crigri
ENSODEG00000012634	-	100	88.189	ENSCSEG00000002358	rab13	64	88.189	Cynoglossus_semilaevis
ENSODEG00000012634	-	100	88.976	ENSDARG00000034771	rab13	64	88.976	Danio_rerio
ENSODEG00000012634	-	100	97.638	ENSDORG00000001591	Rab13	63	97.638	Dipodomys_ordii
ENSODEG00000012634	-	100	97.638	ENSEASG00005000683	-	63	97.638	Equus_asinus_asinus
ENSODEG00000012634	-	100	97.638	ENSECAG00000016551	RAB13	63	97.638	Equus_caballus
ENSODEG00000012634	-	100	98.425	ENSEEUG00000001233	-	63	98.425	Erinaceus_europaeus
ENSODEG00000012634	-	100	88.976	ENSELUG00000012801	rab13	64	88.976	Esox_lucius
ENSODEG00000012634	-	100	96.850	ENSFCAG00000045269	-	63	96.850	Felis_catus
ENSODEG00000012634	-	100	96.850	ENSFDAG00000014469	-	96	96.850	Fukomys_damarensis
ENSODEG00000012634	-	100	88.976	ENSFHEG00000021221	rab13	69	88.976	Fundulus_heteroclitus
ENSODEG00000012634	-	100	88.976	ENSGACG00000011925	rab13	63	88.976	Gasterosteus_aculeatus
ENSODEG00000012634	-	99	94.444	ENSGAGG00000000742	-	63	94.444	Gopherus_agassizii
ENSODEG00000012634	-	100	97.638	ENSGGOG00000023693	RAB13	63	97.638	Gorilla_gorilla
ENSODEG00000012634	-	100	98.425	ENSHGLG00000008749	RAB13	63	98.425	Heterocephalus_glaber_female
ENSODEG00000012634	-	100	98.425	ENSHGLG00100013608	RAB13	63	98.425	Heterocephalus_glaber_male
ENSODEG00000012634	-	100	88.976	ENSHCOG00000007440	rab13	70	88.976	Hippocampus_comes
ENSODEG00000012634	-	100	88.976	ENSIPUG00000003199	rab13	63	88.976	Ictalurus_punctatus
ENSODEG00000012634	-	100	97.638	ENSSTOG00000011222	-	63	97.638	Ictidomys_tridecemlineatus
ENSODEG00000012634	-	100	98.425	ENSJJAG00000010575	Rab13	63	98.425	Jaculus_jaculus
ENSODEG00000012634	-	100	88.189	ENSKMAG00000001908	rab13	68	88.189	Kryptolebias_marmoratus
ENSODEG00000012634	-	100	87.402	ENSLBEG00000026779	rab13	64	87.402	Labrus_bergylta
ENSODEG00000012634	-	90	92.105	ENSLACG00000008103	-	64	92.105	Latimeria_chalumnae
ENSODEG00000012634	-	100	97.638	ENSMFAG00000041018	RAB13	63	97.638	Macaca_fascicularis
ENSODEG00000012634	-	100	97.638	ENSMNEG00000028951	-	63	97.638	Macaca_nemestrina
ENSODEG00000012634	-	100	97.638	ENSMLEG00000042247	-	63	97.638	Mandrillus_leucophaeus
ENSODEG00000012634	-	100	87.402	ENSMAMG00000014602	rab13	64	87.402	Mastacembelus_armatus
ENSODEG00000012634	-	100	96.063	ENSMAUG00000015713	Rab13	63	96.063	Mesocricetus_auratus
ENSODEG00000012634	-	100	97.638	ENSMICG00000010340	-	63	97.638	Microcebus_murinus
ENSODEG00000012634	-	100	96.850	ENSMOCG00000021448	Rab13	63	96.850	Microtus_ochrogaster
ENSODEG00000012634	-	99	97.619	ENSMODG00000017295	-	53	97.619	Monodelphis_domestica
ENSODEG00000012634	-	100	97.638	MGP_CAROLIEiJ_G0025227	Rab13	63	97.638	Mus_caroli
ENSODEG00000012634	-	100	97.638	ENSMUSG00000027935	Rab13	63	97.638	Mus_musculus
ENSODEG00000012634	-	100	97.638	MGP_PahariEiJ_G0026671	Rab13	63	97.638	Mus_pahari
ENSODEG00000012634	-	100	97.638	ENSNGAG00000010309	Rab13	63	97.638	Nannospalax_galili
ENSODEG00000012634	-	99	89.683	ENSNBRG00000004124	rab13	63	89.683	Neolamprologus_brichardi
ENSODEG00000012634	-	100	97.638	ENSNLEG00000028944	-	65	97.638	Nomascus_leucogenys
ENSODEG00000012634	-	99	98.413	ENSMEUG00000009667	-	62	98.413	Notamacropus_eugenii
ENSODEG00000012634	-	100	88.976	ENSONIG00000006340	rab13	63	88.976	Oreochromis_niloticus
ENSODEG00000012634	-	100	97.638	ENSOCUG00000006286	-	71	97.638	Oryctolagus_cuniculus
ENSODEG00000012634	-	100	88.976	ENSOMEG00000008210	rab13	64	88.976	Oryzias_melastigma
ENSODEG00000012634	-	100	96.063	ENSOGAG00000016969	-	63	96.063	Otolemur_garnettii
ENSODEG00000012634	-	100	97.638	ENSPPAG00000028435	-	63	97.638	Pan_paniscus
ENSODEG00000012634	-	100	96.850	ENSPPRG00000008865	-	63	96.850	Panthera_pardus
ENSODEG00000012634	-	100	97.638	ENSPTRG00000001370	RAB13	63	97.638	Pan_troglodytes
ENSODEG00000012634	-	100	97.638	ENSPANG00000004479	-	63	97.638	Papio_anubis
ENSODEG00000012634	-	100	88.189	ENSPMGG00000007680	rab13	64	88.189	Periophthalmus_magnuspinnatus
ENSODEG00000012634	-	85	96.296	ENSPEMG00000017353	-	81	96.296	Peromyscus_maniculatus_bairdii
ENSODEG00000012634	-	99	98.413	ENSPCIG00000029350	-	62	98.413	Phascolarctos_cinereus
ENSODEG00000012634	-	100	86.614	ENSPLAG00000005832	RAB13	68	86.614	Poecilia_latipinna
ENSODEG00000012634	-	100	86.614	ENSPREG00000017567	rab13	64	86.614	Poecilia_reticulata
ENSODEG00000012634	-	100	97.638	ENSPPYG00000000790	-	63	97.638	Pongo_abelii
ENSODEG00000012634	-	100	98.425	ENSPCOG00000012189	-	63	98.425	Propithecus_coquereli
ENSODEG00000012634	-	100	96.850	ENSPVAG00000011095	-	63	96.850	Pteropus_vampyrus
ENSODEG00000012634	-	100	88.976	ENSPNAG00000004189	rab13	67	88.976	Pygocentrus_nattereri
ENSODEG00000012634	-	100	96.850	ENSRNOG00000016733	Rab13	63	96.850	Rattus_norvegicus
ENSODEG00000012634	-	100	97.638	ENSRBIG00000008552	-	63	97.638	Rhinopithecus_bieti
ENSODEG00000012634	-	100	97.638	ENSRROG00000036885	-	63	97.638	Rhinopithecus_roxellana
ENSODEG00000012634	-	100	97.638	ENSSBOG00000020342	-	63	97.638	Saimiri_boliviensis_boliviensis
ENSODEG00000012634	-	99	97.619	ENSSHAG00000011866	-	62	97.619	Sarcophilus_harrisii
ENSODEG00000012634	-	100	97.638	ENSSSCG00000006564	-	63	97.638	Sus_scrofa
ENSODEG00000012634	-	100	89.764	ENSTRUG00000024177	rab13	64	89.764	Takifugu_rubripes
ENSODEG00000012634	-	100	98.425	ENSTBEG00000012734	-	63	98.425	Tupaia_belangeri
ENSODEG00000012634	-	100	97.638	ENSTTRG00000011183	-	63	97.638	Tursiops_truncatus
ENSODEG00000012634	-	67	88.235	ENSXETG00000020729	rab13	53	88.235	Xenopus_tropicalis
ENSODEG00000012634	-	100	86.614	ENSXCOG00000019533	rab13	68	86.614	Xiphophorus_couchianus