EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000012641 (Gene tree)
Gene ID: 101569782
Gene Symbol: SLBP
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 16661 bases
Position: chrJH651521.1:33139531-33156191
Accession: 101569782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017156	SLBP_RNA_bind	PF15247.6	4.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017373	SLBP-201	795	XM_004624626	ENSODEP00000017156	264 (aa)	XP_023556371	UPI000C9F1402

Gene Model

Click here to download ENSODEG00000012641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012641	SLBP	100	84.000	ENSG00000163950	SLBP	100	84.000	Homo_sapiens
ENSODEG00000012641	SLBP	87	50.775	ENSAPOG00000004953	slbp	59	64.286	Acanthochromis_polyacanthus
ENSODEG00000012641	SLBP	82	92.627	ENSAMEG00000016915	SLBP	100	92.627	Ailuropoda_melanoleuca
ENSODEG00000012641	SLBP	73	60.194	ENSACIG00000022308	slbp	62	67.485	Amphilophus_citrinellus
ENSODEG00000012641	SLBP	87	51.163	ENSAOCG00000024545	slbp	60	63.743	Amphiprion_ocellaris
ENSODEG00000012641	SLBP	87	51.163	ENSAPEG00000017629	slbp	60	63.743	Amphiprion_percula
ENSODEG00000012641	SLBP	86	52.713	ENSATEG00000016358	slbp	60	66.082	Anabas_testudineus
ENSODEG00000012641	SLBP	82	80.000	ENSAPLG00000015989	-	100	78.636	Anas_platyrhynchos
ENSODEG00000012641	SLBP	100	80.142	ENSANAG00000034769	SLBP	92	88.940	Aotus_nancymaae
ENSODEG00000012641	SLBP	85	51.779	ENSACLG00000007036	-	56	67.516	Astatotilapia_calliptera
ENSODEG00000012641	SLBP	72	63.682	ENSAMXG00000014527	slbp	63	67.836	Astyanax_mexicanus
ENSODEG00000012641	SLBP	100	82.545	ENSBTAG00000001328	SLBP	100	82.545	Bos_taurus
ENSODEG00000012641	SLBP	100	79.433	ENSCJAG00000001790	SLBP	100	79.433	Callithrix_jacchus
ENSODEG00000012641	SLBP	100	84.000	ENSCAFG00000015016	SLBP	100	84.000	Canis_familiaris
ENSODEG00000012641	SLBP	100	84.000	ENSCAFG00020012334	SLBP	100	84.000	Canis_lupus_dingo
ENSODEG00000012641	SLBP	100	82.909	ENSCHIG00000019364	SLBP	99	84.962	Capra_hircus
ENSODEG00000012641	SLBP	96	88.716	ENSTSYG00000000376	SLBP	92	90.323	Carlito_syrichta
ENSODEG00000012641	SLBP	69	92.818	ENSCAPG00000016340	SLBP	100	92.818	Cavia_aperea
ENSODEG00000012641	SLBP	100	88.727	ENSCPOG00000000031	SLBP	100	88.727	Cavia_porcellus
ENSODEG00000012641	SLBP	59	85.714	ENSCCAG00000026134	SLBP	59	77.500	Cebus_capucinus
ENSODEG00000012641	SLBP	100	84.000	ENSCATG00000029173	SLBP	100	84.000	Cercocebus_atys
ENSODEG00000012641	SLBP	100	92.884	ENSCLAG00000008157	SLBP	100	92.884	Chinchilla_lanigera
ENSODEG00000012641	SLBP	100	69.286	ENSCSAG00000015628	SLBP	100	69.286	Chlorocebus_sabaeus
ENSODEG00000012641	SLBP	95	75.573	ENSCPBG00000000746	SLBP	94	75.000	Chrysemys_picta_bellii
ENSODEG00000012641	SLBP	82	89.352	ENSCANG00000041008	SLBP	100	89.352	Colobus_angolensis_palliatus
ENSODEG00000012641	SLBP	100	85.455	ENSCGRG00001009760	-	100	85.455	Cricetulus_griseus_chok1gshd
ENSODEG00000012641	SLBP	100	84.758	ENSCGRG00001012991	-	100	84.758	Cricetulus_griseus_chok1gshd
ENSODEG00000012641	SLBP	100	85.455	ENSCGRG00000004506	Slbp	100	85.455	Cricetulus_griseus_crigri
ENSODEG00000012641	SLBP	84	54.508	ENSCSEG00000020337	-	58	69.375	Cynoglossus_semilaevis
ENSODEG00000012641	SLBP	85	51.220	ENSCVAG00000019592	-	62	61.905	Cyprinodon_variegatus
ENSODEG00000012641	SLBP	83	56.198	ENSDARG00000100558	slbp	57	66.279	Danio_rerio
ENSODEG00000012641	SLBP	100	77.698	ENSDNOG00000047539	SLBP	100	77.698	Dasypus_novemcinctus
ENSODEG00000012641	SLBP	82	92.130	ENSDORG00000003028	Slbp	100	92.130	Dipodomys_ordii
ENSODEG00000012641	SLBP	85	77.682	ENSETEG00000004641	SLBP	99	77.682	Echinops_telfairi
ENSODEG00000012641	SLBP	73	93.229	ENSEASG00005022714	SLBP	100	93.229	Equus_asinus_asinus
ENSODEG00000012641	SLBP	76	83.886	ENSECAG00000011689	SLBP	69	83.886	Equus_caballus
ENSODEG00000012641	SLBP	86	50.000	ENSELUG00000012854	slbp	58	63.580	Esox_lucius
ENSODEG00000012641	SLBP	100	85.818	ENSFCAG00000000169	SLBP	100	85.818	Felis_catus
ENSODEG00000012641	SLBP	96	71.483	ENSFALG00000010003	-	100	68.478	Ficedula_albicollis
ENSODEG00000012641	SLBP	95	93.676	ENSFDAG00000007592	SLBP	99	93.676	Fukomys_damarensis
ENSODEG00000012641	SLBP	85	50.407	ENSFHEG00000007497	slbp	76	51.485	Fundulus_heteroclitus
ENSODEG00000012641	SLBP	55	72.667	ENSGMOG00000015352	slbp	96	72.667	Gadus_morhua
ENSODEG00000012641	SLBP	96	74.525	ENSGALG00000015712	SLBP	84	76.190	Gallus_gallus
ENSODEG00000012641	SLBP	84	52.632	ENSGAFG00000019577	slbp	61	64.596	Gambusia_affinis
ENSODEG00000012641	SLBP	88	50.602	ENSGACG00000019596	slbp	79	54.106	Gasterosteus_aculeatus
ENSODEG00000012641	SLBP	84	73.391	ENSGAGG00000012096	SLBP	86	72.642	Gopherus_agassizii
ENSODEG00000012641	SLBP	100	84.000	ENSGGOG00000003167	SLBP	100	84.000	Gorilla_gorilla
ENSODEG00000012641	SLBP	85	51.779	ENSHBUG00000003338	-	56	67.516	Haplochromis_burtoni
ENSODEG00000012641	SLBP	92	81.377	ENSHGLG00000008313	-	100	77.528	Heterocephalus_glaber_female
ENSODEG00000012641	SLBP	100	78.388	ENSHGLG00000005955	-	100	79.412	Heterocephalus_glaber_female
ENSODEG00000012641	SLBP	87	84.716	ENSHGLG00000010461	-	89	84.716	Heterocephalus_glaber_female
ENSODEG00000012641	SLBP	100	90.476	ENSHGLG00100014018	-	100	92.574	Heterocephalus_glaber_male
ENSODEG00000012641	SLBP	92	82.186	ENSHGLG00100010510	-	100	78.277	Heterocephalus_glaber_male
ENSODEG00000012641	SLBP	87	84.716	ENSHGLG00100014906	-	89	84.716	Heterocephalus_glaber_male
ENSODEG00000012641	SLBP	87	50.800	ENSHCOG00000013425	slbp	71	58.673	Hippocampus_comes
ENSODEG00000012641	SLBP	71	64.286	ENSIPUG00000016780	slbp	63	68.862	Ictalurus_punctatus
ENSODEG00000012641	SLBP	100	86.182	ENSSTOG00000003262	SLBP	100	86.182	Ictidomys_tridecemlineatus
ENSODEG00000012641	SLBP	100	81.818	ENSJJAG00000002394	-	100	84.000	Jaculus_jaculus
ENSODEG00000012641	SLBP	100	85.455	ENSJJAG00000020549	-	100	85.455	Jaculus_jaculus
ENSODEG00000012641	SLBP	85	52.174	ENSKMAG00000008187	slbp	55	65.605	Kryptolebias_marmoratus
ENSODEG00000012641	SLBP	86	53.175	ENSLBEG00000024709	slbp	61	63.529	Labrus_bergylta
ENSODEG00000012641	SLBP	91	55.686	ENSLACG00000014623	SLBP	77	59.722	Latimeria_chalumnae
ENSODEG00000012641	SLBP	94	52.347	ENSLOCG00000011027	slbp	79	51.489	Lepisosteus_oculatus
ENSODEG00000012641	SLBP	84	82.251	ENSLAFG00000012933	SLBP	99	81.897	Loxodonta_africana
ENSODEG00000012641	SLBP	94	86.853	ENSMFAG00000030130	SLBP	95	74.708	Macaca_fascicularis
ENSODEG00000012641	SLBP	95	84.733	ENSMMUG00000032303	SLBP	96	89.862	Macaca_mulatta
ENSODEG00000012641	SLBP	100	64.184	ENSMNEG00000008082	SLBP	100	64.184	Macaca_nemestrina
ENSODEG00000012641	SLBP	82	89.862	ENSMLEG00000024639	SLBP	87	89.862	Mandrillus_leucophaeus
ENSODEG00000012641	SLBP	87	48.638	ENSMAMG00000001046	-	77	51.142	Mastacembelus_armatus
ENSODEG00000012641	SLBP	85	51.779	ENSMZEG00005017261	-	56	67.516	Maylandia_zebra
ENSODEG00000012641	SLBP	82	78.802	ENSMGAG00000013085	SLBP	100	77.419	Meleagris_gallopavo
ENSODEG00000012641	SLBP	100	85.455	ENSMAUG00000009490	Slbp	100	85.455	Mesocricetus_auratus
ENSODEG00000012641	SLBP	100	82.545	ENSMICG00000014244	SLBP	100	82.545	Microcebus_murinus
ENSODEG00000012641	SLBP	100	84.000	ENSMOCG00000015826	Slbp	99	85.308	Microtus_ochrogaster
ENSODEG00000012641	SLBP	87	53.112	ENSMMOG00000010181	slbp	78	55.941	Mola_mola
ENSODEG00000012641	SLBP	94	79.457	ENSMODG00000004304	SLBP	100	78.927	Monodelphis_domestica
ENSODEG00000012641	SLBP	100	86.182	MGP_CAROLIEiJ_G0027117	Slbp	100	86.182	Mus_caroli
ENSODEG00000012641	SLBP	100	86.545	ENSMUSG00000004642	Slbp	100	86.545	Mus_musculus
ENSODEG00000012641	SLBP	100	86.545	MGP_PahariEiJ_G0016901	Slbp	100	86.545	Mus_pahari
ENSODEG00000012641	SLBP	100	86.545	MGP_SPRETEiJ_G0028113	Slbp	100	86.545	Mus_spretus
ENSODEG00000012641	SLBP	70	91.304	ENSMPUG00000011139	SLBP	94	91.304	Mustela_putorius_furo
ENSODEG00000012641	SLBP	82	88.991	ENSMLUG00000004425	SLBP	93	88.991	Myotis_lucifugus
ENSODEG00000012641	SLBP	100	82.545	ENSNGAG00000020799	Slbp	100	82.545	Nannospalax_galili
ENSODEG00000012641	SLBP	78	52.814	ENSNBRG00000006044	-	58	66.879	Neolamprologus_brichardi
ENSODEG00000012641	SLBP	100	81.915	ENSNLEG00000000048	SLBP	100	81.915	Nomascus_leucogenys
ENSODEG00000012641	SLBP	67	87.006	ENSMEUG00000002501	SLBP	88	87.898	Notamacropus_eugenii
ENSODEG00000012641	SLBP	84	53.968	ENSONIG00000017469	-	56	68.153	Oreochromis_niloticus
ENSODEG00000012641	SLBP	82	84.332	ENSOANG00000014243	SLBP	95	84.332	Ornithorhynchus_anatinus
ENSODEG00000012641	SLBP	86	51.440	ENSORLG00000024887	-	75	52.970	Oryzias_latipes
ENSODEG00000012641	SLBP	86	51.883	ENSORLG00020007798	slbp	62	57.927	Oryzias_latipes_hni
ENSODEG00000012641	SLBP	86	52.301	ENSORLG00015016656	slbp	74	54.040	Oryzias_latipes_hsok
ENSODEG00000012641	SLBP	86	52.301	ENSOMEG00000010818	slbp	74	55.721	Oryzias_melastigma
ENSODEG00000012641	SLBP	100	83.273	ENSOGAG00000009750	SLBP	100	83.273	Otolemur_garnettii
ENSODEG00000012641	SLBP	82	89.862	ENSOARG00000016090	SLBP	100	89.862	Ovis_aries
ENSODEG00000012641	SLBP	100	83.636	ENSPPAG00000033300	SLBP	100	83.636	Pan_paniscus
ENSODEG00000012641	SLBP	93	89.200	ENSPPRG00000016897	SLBP	100	89.200	Panthera_pardus
ENSODEG00000012641	SLBP	73	93.750	ENSPTIG00000015057	SLBP	100	93.750	Panthera_tigris_altaica
ENSODEG00000012641	SLBP	100	83.273	ENSPTRG00000015832	SLBP	100	83.273	Pan_troglodytes
ENSODEG00000012641	SLBP	100	79.577	ENSPANG00000004932	SLBP	100	78.030	Papio_anubis
ENSODEG00000012641	SLBP	95	51.825	ENSPKIG00000006183	slbp	78	52.863	Paramormyrops_kingsleyae
ENSODEG00000012641	SLBP	69	56.995	ENSPMGG00000017684	-	82	60.843	Periophthalmus_magnuspinnatus
ENSODEG00000012641	SLBP	100	85.091	ENSPEMG00000018369	Slbp	100	85.091	Peromyscus_maniculatus_bairdii
ENSODEG00000012641	SLBP	100	73.559	ENSPCIG00000013575	SLBP	86	73.559	Phascolarctos_cinereus
ENSODEG00000012641	SLBP	85	51.822	ENSPFOG00000000462	slbp	58	64.596	Poecilia_formosa
ENSODEG00000012641	SLBP	85	51.822	ENSPLAG00000008300	slbp	57	66.013	Poecilia_latipinna
ENSODEG00000012641	SLBP	85	51.822	ENSPMEG00000020807	slbp	58	64.596	Poecilia_mexicana
ENSODEG00000012641	SLBP	85	51.822	ENSPREG00000004561	slbp	58	64.596	Poecilia_reticulata
ENSODEG00000012641	SLBP	100	83.273	ENSPPYG00000014529	SLBP	100	83.273	Pongo_abelii
ENSODEG00000012641	SLBP	100	82.909	ENSPCOG00000017399	SLBP	100	82.909	Propithecus_coquereli
ENSODEG00000012641	SLBP	100	78.229	ENSPVAG00000002807	SLBP	100	78.229	Pteropus_vampyrus
ENSODEG00000012641	SLBP	85	51.779	ENSPNYG00000005451	-	56	67.516	Pundamilia_nyererei
ENSODEG00000012641	SLBP	84	57.500	ENSPNAG00000018503	slbp	61	68.712	Pygocentrus_nattereri
ENSODEG00000012641	SLBP	100	85.818	ENSRNOG00000037162	Slbp	100	85.818	Rattus_norvegicus
ENSODEG00000012641	SLBP	100	84.000	ENSRBIG00000039159	SLBP	100	84.000	Rhinopithecus_bieti
ENSODEG00000012641	SLBP	97	86.100	ENSRROG00000030081	SLBP	95	87.109	Rhinopithecus_roxellana
ENSODEG00000012641	SLBP	73	88.542	ENSSBOG00000033897	SLBP	100	88.542	Saimiri_boliviensis_boliviensis
ENSODEG00000012641	SLBP	98	77.256	ENSSHAG00000013939	SLBP	93	77.256	Sarcophilus_harrisii
ENSODEG00000012641	SLBP	91	55.894	ENSSFOG00015019429	slbp	61	63.905	Scleropages_formosus
ENSODEG00000012641	SLBP	87	48.263	ENSSMAG00000016028	-	65	56.021	Scophthalmus_maximus
ENSODEG00000012641	SLBP	92	51.562	ENSSDUG00000000855	-	61	63.158	Seriola_dumerili
ENSODEG00000012641	SLBP	51	55.102	ENSSLDG00000022893	-	67	60.526	Seriola_lalandi_dorsalis
ENSODEG00000012641	SLBP	100	68.519	ENSSPUG00000016007	SLBP	100	67.286	Sphenodon_punctatus
ENSODEG00000012641	SLBP	85	52.778	ENSSPAG00000004021	slbp	66	64.327	Stegastes_partitus
ENSODEG00000012641	SLBP	100	81.818	ENSSSCG00000008676	SLBP	100	81.818	Sus_scrofa
ENSODEG00000012641	SLBP	95	70.115	ENSTGUG00000010626	-	83	76.147	Taeniopygia_guttata
ENSODEG00000012641	SLBP	87	53.175	ENSTRUG00000000688	slbp	59	65.854	Takifugu_rubripes
ENSODEG00000012641	SLBP	72	56.477	ENSTNIG00000000484	-	63	64.000	Tetraodon_nigroviridis
ENSODEG00000012641	SLBP	94	67.589	ENSTBEG00000004085	SLBP	99	65.339	Tupaia_belangeri
ENSODEG00000012641	SLBP	82	90.741	ENSTTRG00000010901	-	100	90.741	Tursiops_truncatus
ENSODEG00000012641	SLBP	67	87.571	ENSTTRG00000004010	-	88	87.898	Tursiops_truncatus
ENSODEG00000012641	SLBP	100	83.394	ENSUAMG00000012990	SLBP	100	83.394	Ursus_americanus
ENSODEG00000012641	SLBP	73	92.188	ENSUMAG00000006119	SLBP	100	92.188	Ursus_maritimus
ENSODEG00000012641	SLBP	100	84.000	ENSVVUG00000015578	-	100	84.000	Vulpes_vulpes
ENSODEG00000012641	SLBP	94	56.031	ENSXETG00000003876	slbp	76	64.319	Xenopus_tropicalis
ENSODEG00000012641	SLBP	74	57.561	ENSXCOG00000008275	slbp	58	67.320	Xiphophorus_couchianus
ENSODEG00000012641	SLBP	85	51.822	ENSXMAG00000001331	-	58	64.596	Xiphophorus_maculatus