EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012689 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 462 bases
Position: chrJH651632.1:8847893-8848354
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017224	MRP-S32	PF10210.9	6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017441	-	432	-	ENSODEP00000017224	143 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012689	-	83	92.437	ENSODEG00000008681	-	100	92.437
ENSODEG00000012689	-	99	78.873	ENSODEG00000016452	-	99	78.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012689	-	100	77.622	ENSG00000198015	MRPL42	100	76.224	Homo_sapiens
ENSODEG00000012689	-	76	78.704	ENSAMEG00000009832	MRPL42	84	76.852	Ailuropoda_melanoleuca
ENSODEG00000012689	-	68	60.825	ENSACIG00000017826	mrpl42	69	59.794	Amphilophus_citrinellus
ENSODEG00000012689	-	97	61.429	ENSAPLG00000015057	MRPL42	97	58.571	Anas_platyrhynchos
ENSODEG00000012689	-	100	57.343	ENSANAG00000036083	-	100	56.643	Aotus_nancymaae
ENSODEG00000012689	-	90	72.093	ENSANAG00000000692	-	91	70.543	Aotus_nancymaae
ENSODEG00000012689	-	90	71.094	ENSANAG00000033101	-	84	69.531	Aotus_nancymaae
ENSODEG00000012689	-	100	74.825	ENSANAG00000036935	-	100	73.427	Aotus_nancymaae
ENSODEG00000012689	-	100	79.720	ENSBTAG00000002708	MRPL42	100	78.322	Bos_taurus
ENSODEG00000012689	-	75	69.159	ENSBTAG00000052971	-	97	67.290	Bos_taurus
ENSODEG00000012689	-	100	76.224	ENSCJAG00000046971	MRPL42	100	74.825	Callithrix_jacchus
ENSODEG00000012689	-	51	68.750	ENSCAFG00000030257	-	89	68.750	Canis_familiaris
ENSODEG00000012689	-	51	76.712	ENSCAFG00020016271	-	97	76.712	Canis_lupus_dingo
ENSODEG00000012689	-	69	81.633	ENSCAFG00020022967	-	85	79.592	Canis_lupus_dingo
ENSODEG00000012689	-	90	79.070	ENSCHIG00000014921	MRPL42	100	77.519	Capra_hircus
ENSODEG00000012689	-	92	74.242	ENSTSYG00000036466	-	90	72.727	Carlito_syrichta
ENSODEG00000012689	-	81	72.414	ENSTSYG00000032810	-	100	70.690	Carlito_syrichta
ENSODEG00000012689	-	100	81.119	ENSTSYG00000006370	-	100	79.720	Carlito_syrichta
ENSODEG00000012689	-	84	88.333	ENSCAPG00000016985	-	89	85.833	Cavia_aperea
ENSODEG00000012689	-	100	72.028	ENSCAPG00000015105	-	100	69.930	Cavia_aperea
ENSODEG00000012689	-	96	88.321	ENSCPOG00000030015	-	98	85.915	Cavia_porcellus
ENSODEG00000012689	-	100	72.028	ENSCPOG00000008943	-	100	69.930	Cavia_porcellus
ENSODEG00000012689	-	100	76.923	ENSCCAG00000031179	-	100	75.524	Cebus_capucinus
ENSODEG00000012689	-	90	73.438	ENSCCAG00000032203	-	77	71.875	Cebus_capucinus
ENSODEG00000012689	-	90	62.016	ENSCCAG00000029290	-	83	60.465	Cebus_capucinus
ENSODEG00000012689	-	100	78.322	ENSCATG00000037616	MRPL42	100	76.923	Cercocebus_atys
ENSODEG00000012689	-	100	86.713	ENSCLAG00000005421	MRPL42	100	84.615	Chinchilla_lanigera
ENSODEG00000012689	-	100	77.622	ENSCSAG00000003706	MRPL42	100	76.224	Chlorocebus_sabaeus
ENSODEG00000012689	-	85	68.033	ENSCPBG00000001581	MRPL42	82	66.393	Chrysemys_picta_bellii
ENSODEG00000012689	-	100	78.322	ENSCANG00000033457	MRPL42	100	76.923	Colobus_angolensis_palliatus
ENSODEG00000012689	-	100	74.126	ENSCGRG00001012694	-	99	73.427	Cricetulus_griseus_chok1gshd
ENSODEG00000012689	-	99	63.121	ENSCGRG00001003813	-	99	62.411	Cricetulus_griseus_chok1gshd
ENSODEG00000012689	-	99	75.177	ENSCGRG00000003801	Mrpl42	99	74.468	Cricetulus_griseus_crigri
ENSODEG00000012689	-	100	72.727	ENSDNOG00000032710	-	100	72.727	Dasypus_novemcinctus
ENSODEG00000012689	-	100	69.231	ENSDNOG00000049701	-	100	69.231	Dasypus_novemcinctus
ENSODEG00000012689	-	99	78.014	ENSDORG00000015571	Mrpl42	99	76.596	Dipodomys_ordii
ENSODEG00000012689	-	87	50.000	ENSETEG00000014745	-	92	50.000	Echinops_telfairi
ENSODEG00000012689	-	100	81.818	ENSEASG00005019361	MRPL42	100	80.420	Equus_asinus_asinus
ENSODEG00000012689	-	100	81.119	ENSECAG00000026888	MRPL42	100	79.720	Equus_caballus
ENSODEG00000012689	-	100	77.622	ENSFCAG00000037907	-	100	76.224	Felis_catus
ENSODEG00000012689	-	87	75.200	ENSFCAG00000040567	-	100	73.600	Felis_catus
ENSODEG00000012689	-	90	61.719	ENSFCAG00000036356	-	79	60.938	Felis_catus
ENSODEG00000012689	-	87	67.742	ENSFALG00000010717	MRPL42	84	65.323	Ficedula_albicollis
ENSODEG00000012689	-	99	82.979	ENSFDAG00000018129	MRPL42	99	81.560	Fukomys_damarensis
ENSODEG00000012689	-	87	64.516	ENSGALG00000011293	MRPL42	84	63.710	Gallus_gallus
ENSODEG00000012689	-	85	69.672	ENSGAGG00000010125	MRPL42	82	68.033	Gopherus_agassizii
ENSODEG00000012689	-	100	77.622	ENSGGOG00000022760	MRPL42	100	76.224	Gorilla_gorilla
ENSODEG00000012689	-	86	86.992	ENSHGLG00000007399	-	93	85.039	Heterocephalus_glaber_female
ENSODEG00000012689	-	87	81.452	ENSHGLG00000008248	-	100	79.839	Heterocephalus_glaber_female
ENSODEG00000012689	-	88	86.508	ENSHGLG00100018317	-	88	84.921	Heterocephalus_glaber_male
ENSODEG00000012689	-	85	82.787	ENSHGLG00100013257	-	98	81.148	Heterocephalus_glaber_male
ENSODEG00000012689	-	100	77.622	ENSSTOG00000026544	MRPL42	100	76.224	Ictidomys_tridecemlineatus
ENSODEG00000012689	-	100	55.479	ENSLACG00000006919	MRPL42	100	54.795	Latimeria_chalumnae
ENSODEG00000012689	-	85	77.049	ENSLAFG00000013779	MRPL42	86	76.230	Loxodonta_africana
ENSODEG00000012689	-	100	79.021	ENSMFAG00000032330	MRPL42	100	77.622	Macaca_fascicularis
ENSODEG00000012689	-	100	76.224	ENSMMUG00000016805	MRPL42	100	74.825	Macaca_mulatta
ENSODEG00000012689	-	100	78.322	ENSMNEG00000028853	MRPL42	100	76.923	Macaca_nemestrina
ENSODEG00000012689	-	100	78.322	ENSMLEG00000038104	MRPL42	100	76.923	Mandrillus_leucophaeus
ENSODEG00000012689	-	87	66.129	ENSMGAG00000011346	MRPL42	84	64.516	Meleagris_gallopavo
ENSODEG00000012689	-	99	72.340	ENSMAUG00000010057	-	99	71.631	Mesocricetus_auratus
ENSODEG00000012689	-	99	60.993	ENSMAUG00000018130	-	99	60.284	Mesocricetus_auratus
ENSODEG00000012689	-	88	79.365	ENSMICG00000036541	-	99	74.766	Microcebus_murinus
ENSODEG00000012689	-	68	77.320	ENSMICG00000045594	-	97	75.258	Microcebus_murinus
ENSODEG00000012689	-	100	80.420	ENSMICG00000032596	-	100	79.021	Microcebus_murinus
ENSODEG00000012689	-	68	76.289	ENSMICG00000028094	-	84	85.000	Microcebus_murinus
ENSODEG00000012689	-	93	80.451	ENSMICG00000035189	-	92	78.947	Microcebus_murinus
ENSODEG00000012689	-	99	69.504	ENSMOCG00000004616	-	99	68.085	Microtus_ochrogaster
ENSODEG00000012689	-	99	74.468	ENSMOCG00000013541	-	99	73.759	Microtus_ochrogaster
ENSODEG00000012689	-	99	71.631	MGP_CAROLIEiJ_G0015750	Mrpl42	99	71.631	Mus_caroli
ENSODEG00000012689	-	99	71.631	ENSMUSG00000062981	Mrpl42	99	71.631	Mus_musculus
ENSODEG00000012689	-	99	76.596	ENSMLUG00000025058	-	99	75.887	Myotis_lucifugus
ENSODEG00000012689	-	100	72.028	ENSMLUG00000023702	-	100	71.329	Myotis_lucifugus
ENSODEG00000012689	-	100	75.524	ENSMLUG00000029623	-	100	74.126	Myotis_lucifugus
ENSODEG00000012689	-	90	77.519	ENSNGAG00000000717	Mrpl42	100	75.969	Nannospalax_galili
ENSODEG00000012689	-	100	77.622	ENSNLEG00000005699	MRPL42	100	76.224	Nomascus_leucogenys
ENSODEG00000012689	-	100	71.329	ENSOPRG00000010967	MRPL42	100	70.629	Ochotona_princeps
ENSODEG00000012689	-	100	75.524	ENSOCUG00000010928	MRPL42	100	74.126	Oryctolagus_cuniculus
ENSODEG00000012689	-	99	71.127	ENSOGAG00000030438	-	100	69.718	Otolemur_garnettii
ENSODEG00000012689	-	100	74.126	ENSOGAG00000027617	-	100	72.727	Otolemur_garnettii
ENSODEG00000012689	-	100	81.119	ENSOGAG00000025600	-	100	79.720	Otolemur_garnettii
ENSODEG00000012689	-	100	79.720	ENSOGAG00000025686	-	100	78.322	Otolemur_garnettii
ENSODEG00000012689	-	100	74.825	ENSOGAG00000024156	-	100	73.427	Otolemur_garnettii
ENSODEG00000012689	-	100	74.825	ENSOGAG00000034004	-	100	74.126	Otolemur_garnettii
ENSODEG00000012689	-	100	73.427	ENSOGAG00000026395	-	100	72.028	Otolemur_garnettii
ENSODEG00000012689	-	90	79.845	ENSOARG00000015849	MRPL42	100	78.295	Ovis_aries
ENSODEG00000012689	-	100	78.322	ENSPPAG00000038254	MRPL42	100	76.923	Pan_paniscus
ENSODEG00000012689	-	100	77.622	ENSPPRG00000013218	-	100	76.224	Panthera_pardus
ENSODEG00000012689	-	100	76.923	ENSPPRG00000015755	-	100	75.524	Panthera_pardus
ENSODEG00000012689	-	90	58.594	ENSPPRG00000006533	-	79	57.812	Panthera_pardus
ENSODEG00000012689	-	87	75.200	ENSPPRG00000017935	-	100	73.600	Panthera_pardus
ENSODEG00000012689	-	100	76.923	ENSPTIG00000009394	-	100	75.524	Panthera_tigris_altaica
ENSODEG00000012689	-	83	72.881	ENSPTIG00000009717	-	92	72.807	Panthera_tigris_altaica
ENSODEG00000012689	-	100	77.622	ENSPTIG00000019099	-	100	76.224	Panthera_tigris_altaica
ENSODEG00000012689	-	100	78.322	ENSPTRG00000022791	MRPL42	100	76.923	Pan_troglodytes
ENSODEG00000012689	-	100	70.270	ENSPANG00000030179	MRPL42	100	68.919	Papio_anubis
ENSODEG00000012689	-	99	57.143	ENSPSIG00000010745	MRPL42	83	65.041	Pelodiscus_sinensis
ENSODEG00000012689	-	99	75.177	ENSPEMG00000020562	-	99	74.016	Peromyscus_maniculatus_bairdii
ENSODEG00000012689	-	100	59.732	ENSPCIG00000001472	-	77	59.060	Phascolarctos_cinereus
ENSODEG00000012689	-	100	76.923	ENSPPYG00000004833	MRPL42	100	75.524	Pongo_abelii
ENSODEG00000012689	-	79	81.034	ENSPCAG00000003791	MRPL42	97	81.034	Procavia_capensis
ENSODEG00000012689	-	90	79.070	ENSPCOG00000014986	-	92	77.519	Propithecus_coquereli
ENSODEG00000012689	-	100	61.538	ENSPCOG00000018896	-	100	60.140	Propithecus_coquereli
ENSODEG00000012689	-	100	72.028	ENSPCOG00000025008	-	100	70.629	Propithecus_coquereli
ENSODEG00000012689	-	58	61.446	ENSPVAG00000013736	-	69	59.036	Pteropus_vampyrus
ENSODEG00000012689	-	99	72.340	ENSRNOG00000042740	Mrpl42	99	70.922	Rattus_norvegicus
ENSODEG00000012689	-	100	65.972	ENSRNOG00000021867	AABR07009508.1	100	64.583	Rattus_norvegicus
ENSODEG00000012689	-	100	77.622	ENSRBIG00000011046	-	100	76.224	Rhinopithecus_bieti
ENSODEG00000012689	-	90	57.364	ENSRBIG00000044361	-	79	55.814	Rhinopithecus_bieti
ENSODEG00000012689	-	100	77.622	ENSRROG00000033949	MRPL42	100	76.224	Rhinopithecus_roxellana
ENSODEG00000012689	-	100	74.126	ENSSBOG00000009656	-	100	72.727	Saimiri_boliviensis_boliviensis
ENSODEG00000012689	-	66	73.684	ENSSBOG00000027483	-	82	71.579	Saimiri_boliviensis_boliviensis
ENSODEG00000012689	-	83	55.462	ENSSBOG00000025086	-	100	52.941	Saimiri_boliviensis_boliviensis
ENSODEG00000012689	-	84	56.098	ENSSFOG00015006975	mrpl42	84	55.285	Scleropages_formosus
ENSODEG00000012689	-	91	63.846	ENSSPUG00000015009	-	87	62.308	Sphenodon_punctatus
ENSODEG00000012689	-	65	60.000	ENSSPAG00000013637	mrpl42	73	58.947	Stegastes_partitus
ENSODEG00000012689	-	76	57.391	ENSSSCG00000035613	-	88	62.000	Sus_scrofa
ENSODEG00000012689	-	100	79.720	ENSSSCG00000030478	-	100	78.322	Sus_scrofa
ENSODEG00000012689	-	99	59.859	ENSSSCG00000036897	-	99	59.155	Sus_scrofa
ENSODEG00000012689	-	70	57.000	ENSSSCG00000034693	-	84	57.000	Sus_scrofa
ENSODEG00000012689	-	83	66.387	ENSTGUG00000008272	MRPL42	100	63.866	Taeniopygia_guttata
ENSODEG00000012689	-	62	53.933	ENSTNIG00000018478	mrpl42	67	52.809	Tetraodon_nigroviridis
ENSODEG00000012689	-	87	79.839	ENSTTRG00000003312	MRPL42	92	78.226	Tursiops_truncatus
ENSODEG00000012689	-	100	79.720	ENSUAMG00000025405	-	100	78.322	Ursus_americanus
ENSODEG00000012689	-	56	67.500	ENSUAMG00000019831	-	84	67.500	Ursus_americanus
ENSODEG00000012689	-	100	79.720	ENSUMAG00000003107	-	100	78.322	Ursus_maritimus
ENSODEG00000012689	-	83	68.908	ENSUMAG00000014643	-	74	68.908	Ursus_maritimus
ENSODEG00000012689	-	83	78.151	ENSVPAG00000007658	MRPL42	100	76.471	Vicugna_pacos
ENSODEG00000012689	-	53	73.684	ENSVVUG00000002834	-	94	73.684	Vulpes_vulpes
ENSODEG00000012689	-	52	77.027	ENSVVUG00000007253	-	95	77.027	Vulpes_vulpes
ENSODEG00000012689	-	100	76.923	ENSVVUG00000011842	-	100	75.524	Vulpes_vulpes
ENSODEG00000012689	-	71	53.465	ENSXMAG00000004057	mrpl42	76	52.475	Xiphophorus_maculatus