EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000012729 (Gene tree)
Gene ID
101589666
Gene Symbol
-
Alias
U2AF65
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
13573 bases
Position
chrJH651835.1:174376-187948
Accession
101589666
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000017278RRM_1PF00076.225.9e-2912
ENSODEP00000017278RRM_1PF00076.225.9e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000017495-1356XM_004647693ENSODEP00000017278451 (aa)XP_004647750-
Gene Model
Click here to download ENSODEG00000012729's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012729's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000012729-9964.468ENSODEG00000009254-10065.957
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000012729-10094.737ENSG00000063244U2AF299100.000Homo_sapiens
ENSODEG00000012729-9970.464ENSAPOG00000002208-10067.089Acanthochromis_polyacanthus
ENSODEG00000012729-6481.651ENSAPOG00000023155u2af2a10081.651Acanthochromis_polyacanthus
ENSODEG00000012729-8791.587ENSAMEG00000003864U2AF210091.587Ailuropoda_melanoleuca
ENSODEG00000012729-9669.379ENSACIG00000014173-8972.182Amphilophus_citrinellus
ENSODEG00000012729-8288.550ENSACIG00000005749u2af2a9486.732Amphilophus_citrinellus
ENSODEG00000012729-9984.000ENSAOCG00000015571u2af2a10084.000Amphiprion_ocellaris
ENSODEG00000012729-9970.886ENSAOCG00000003595-10067.511Amphiprion_ocellaris
ENSODEG00000012729-9670.087ENSAPEG00000020062-8673.284Amphiprion_percula
ENSODEG00000012729-8288.550ENSAPEG00000009376u2af2a9586.732Amphiprion_percula
ENSODEG00000012729-9671.179ENSATEG00000020577-8874.265Anabas_testudineus
ENSODEG00000012729-10083.824ENSATEG00000022332u2af2a10083.824Anabas_testudineus
ENSODEG00000012729-10090.947ENSACAG00000015489U2AF210091.368Anolis_carolinensis
ENSODEG00000012729-10091.185ENSANAG00000028042U2AF210091.185Aotus_nancymaae
ENSODEG00000012729-10084.034ENSACLG00000022181u2af2a10084.034Astatotilapia_calliptera
ENSODEG00000012729-9970.886ENSACLG00000020793-10067.511Astatotilapia_calliptera
ENSODEG00000012729-9980.421ENSAMXG00000039454u2af2b9979.579Astyanax_mexicanus
ENSODEG00000012729-10079.089ENSAMXG00000033347u2af2a10079.545Astyanax_mexicanus
ENSODEG00000012729-10094.316ENSBTAG00000002830U2AF210094.316Bos_taurus
ENSODEG00000012729-9152.752WBGene00006697uaf-110055.263Caenorhabditis_elegans
ENSODEG00000012729-10094.737ENSCJAG00000017128U2AF210094.737Callithrix_jacchus
ENSODEG00000012729-10094.105ENSCAFG00000002551U2AF210094.105Canis_familiaris
ENSODEG00000012729-9690.497ENSCAFG00020015445U2AF29790.497Canis_lupus_dingo
ENSODEG00000012729-8487.147ENSCHIG00000023595U2AF28987.629Capra_hircus
ENSODEG00000012729-10094.737ENSTSYG00000007432U2AF210094.737Carlito_syrichta
ENSODEG00000012729-9694.323ENSCAPG00000008466U2AF210094.323Cavia_aperea
ENSODEG00000012729-10094.526ENSCPOG00000001582U2AF210094.526Cavia_porcellus
ENSODEG00000012729-10094.737ENSCCAG00000023336U2AF210094.737Cebus_capucinus
ENSODEG00000012729-10094.105ENSCATG00000004637U2AF210094.105Cercocebus_atys
ENSODEG00000012729-10094.105ENSCLAG00000000596U2AF210094.105Chinchilla_lanigera
ENSODEG00000012729-10094.105ENSCSAG00000001722U2AF210094.105Chlorocebus_sabaeus
ENSODEG00000012729-8290.955ENSCPBG00000004485U2AF210090.675Chrysemys_picta_bellii
ENSODEG00000012729-8264.377ENSCING00000003455-8064.646Ciona_intestinalis
ENSODEG00000012729-8263.636ENSCSAVG00000006813-8761.707Ciona_savignyi
ENSODEG00000012729-9093.287ENSCANG00000031002-9693.287Colobus_angolensis_palliatus
ENSODEG00000012729-10086.192ENSCANG00000043845-10086.611Colobus_angolensis_palliatus
ENSODEG00000012729-10094.947ENSCGRG00001003185-10094.947Cricetulus_griseus_chok1gshd
ENSODEG00000012729-9982.911ENSCGRG00001007486-9982.489Cricetulus_griseus_chok1gshd
ENSODEG00000012729-9982.911ENSCGRG00000018587-9982.489Cricetulus_griseus_crigri
ENSODEG00000012729-9968.067ENSCSEG00000020504-8872.388Cynoglossus_semilaevis
ENSODEG00000012729-7588.820ENSCSEG00000018709u2af2a7096.522Cynoglossus_semilaevis
ENSODEG00000012729-10083.613ENSCVAG00000001259u2af2a10083.613Cyprinodon_variegatus
ENSODEG00000012729-9971.097ENSCVAG00000023307-10067.722Cyprinodon_variegatus
ENSODEG00000012729-10080.084ENSDARG00000012505u2af2a10079.794Danio_rerio
ENSODEG00000012729-10080.331ENSDARG00000011740u2af2b10080.124Danio_rerio
ENSODEG00000012729-9093.287ENSDNOG00000047039U2AF29693.287Dasypus_novemcinctus
ENSODEG00000012729-10094.737ENSDORG00000003250U2af210094.737Dipodomys_ordii
ENSODEG00000012729-8166.919FBgn0005411U2af5010066.489Drosophila_melanogaster
ENSODEG00000012729-8049.015FBgn0034834LS28549.377Drosophila_melanogaster
ENSODEG00000012729-9069.697ENSEBUG00000010917U2AF28971.149Eptatretus_burgeri
ENSODEG00000012729-9054.920ENSEBUG00000001732U2AF29057.317Eptatretus_burgeri
ENSODEG00000012729-9691.522ENSEASG00005020708U2AF29091.522Equus_asinus_asinus
ENSODEG00000012729-10090.737ENSECAG00000010110U2AF210089.053Equus_caballus
ENSODEG00000012729-9969.620ENSELUG00000018459-10065.823Esox_lucius
ENSODEG00000012729-10082.474ENSELUG00000015850u2af2a10082.438Esox_lucius
ENSODEG00000012729-10077.568ENSELUG00000022291u2af2b10077.568Esox_lucius
ENSODEG00000012729-10094.737ENSFCAG00000011504U2AF210094.737Felis_catus
ENSODEG00000012729-9992.751ENSFDAG00000011264U2AF29992.751Fukomys_damarensis
ENSODEG00000012729-10083.193ENSFHEG00000016025u2af2a10083.019Fundulus_heteroclitus
ENSODEG00000012729-10082.390ENSGMOG00000004535u2af2a10082.083Gadus_morhua
ENSODEG00000012729-9889.485ENSGALG00000052748U2AF26589.914Gallus_gallus
ENSODEG00000012729-10083.613ENSGAFG00000013626u2af2a8883.613Gambusia_affinis
ENSODEG00000012729-9968.776ENSGAFG00000005628-10067.300Gambusia_affinis
ENSODEG00000012729-9970.947ENSGACG00000014500-10069.620Gasterosteus_aculeatus
ENSODEG00000012729-10082.773ENSGACG00000010632U2AF210082.636Gasterosteus_aculeatus
ENSODEG00000012729-6490.675ENSGAGG00000011849U2AF210090.675Gopherus_agassizii
ENSODEG00000012729-5198.246ENSGGOG00000036399-8798.246Gorilla_gorilla
ENSODEG00000012729-10084.034ENSHBUG00000013935u2af2a10084.034Haplochromis_burtoni
ENSODEG00000012729-9970.886ENSHBUG00000017424-10067.511Haplochromis_burtoni
ENSODEG00000012729-10094.737ENSHGLG00000005889U2AF210094.737Heterocephalus_glaber_female
ENSODEG00000012729-9694.541ENSHGLG00100004757U2AF210094.541Heterocephalus_glaber_male
ENSODEG00000012729-10082.025ENSHCOG00000019367u2af2a10081.781Hippocampus_comes
ENSODEG00000012729-9968.143ENSIPUG00000009844-10064.557Ictalurus_punctatus
ENSODEG00000012729-10078.407ENSIPUG00000007717u2af2a10077.732Ictalurus_punctatus
ENSODEG00000012729-9980.290ENSIPUG00000009077u2af29979.253Ictalurus_punctatus
ENSODEG00000012729-10094.737ENSSTOG00000019595U2AF210094.737Ictidomys_tridecemlineatus
ENSODEG00000012729-10094.947ENSJJAG00000017705U2af210094.947Jaculus_jaculus
ENSODEG00000012729-10083.857ENSKMAG00000005960u2af2a10083.403Kryptolebias_marmoratus
ENSODEG00000012729-10083.824ENSLBEG00000016162u2af2a10083.824Labrus_bergylta
ENSODEG00000012729-9667.666ENSLBEG00000005001-8971.223Labrus_bergylta
ENSODEG00000012729-7791.105ENSLACG00000001648U2AF210091.105Latimeria_chalumnae
ENSODEG00000012729-5786.429ENSLOCG00000008050u2af2b8086.525Lepisosteus_oculatus
ENSODEG00000012729-9969.167ENSLOCG00000010843-10067.722Lepisosteus_oculatus
ENSODEG00000012729-10094.526ENSLAFG00000018056-10094.526Loxodonta_africana
ENSODEG00000012729-10080.842ENSLAFG00000028496-10080.842Loxodonta_africana
ENSODEG00000012729-10094.737ENSMFAG00000038383U2AF210094.737Macaca_fascicularis
ENSODEG00000012729-10094.526ENSMMUG00000004810U2AF210094.526Macaca_mulatta
ENSODEG00000012729-10094.105ENSMNEG00000042096U2AF210094.105Macaca_nemestrina
ENSODEG00000012729-9693.900ENSMLEG00000032219U2AF28993.900Mandrillus_leucophaeus
ENSODEG00000012729-9968.143ENSMAMG00000020158-10066.456Mastacembelus_armatus
ENSODEG00000012729-10082.573ENSMAMG00000019817u2af2a10082.573Mastacembelus_armatus
ENSODEG00000012729-10084.034ENSMZEG00005016563u2af2a10084.034Maylandia_zebra
ENSODEG00000012729-9970.886ENSMZEG00005023318-10067.511Maylandia_zebra
ENSODEG00000012729-9893.978ENSMAUG00000008180U2af29993.978Mesocricetus_auratus
ENSODEG00000012729-10094.105ENSMICG00000027681U2AF210094.105Microcebus_murinus
ENSODEG00000012729-6488.103ENSMOCG00000001018-10088.103Microtus_ochrogaster
ENSODEG00000012729-10094.947ENSMOCG00000013214-10094.947Microtus_ochrogaster
ENSODEG00000012729-10084.211ENSMOCG00000007227-10081.895Microtus_ochrogaster
ENSODEG00000012729-9962.781ENSMMOG00000000531-10062.168Mola_mola
ENSODEG00000012729-8288.295ENSMMOG00000016600u2af2a9386.241Mola_mola
ENSODEG00000012729-10083.857ENSMALG00000009985u2af2a10083.229Monopterus_albus
ENSODEG00000012729-10094.947MGP_CAROLIEiJ_G0029150U2af210094.947Mus_caroli
ENSODEG00000012729-10094.947ENSMUSG00000030435U2af210094.947Mus_musculus
ENSODEG00000012729-10094.947MGP_PahariEiJ_G0021017U2af210094.947Mus_pahari
ENSODEG00000012729-10094.947MGP_SPRETEiJ_G0030203U2af210094.947Mus_spretus
ENSODEG00000012729-10094.105ENSMPUG00000007135U2AF210094.105Mustela_putorius_furo
ENSODEG00000012729-5396.266ENSMLUG00000011051-10096.266Myotis_lucifugus
ENSODEG00000012729-10094.737ENSNGAG00000020369U2af210094.737Nannospalax_galili
ENSODEG00000012729-9669.593ENSNBRG00000011100-8972.422Neolamprologus_brichardi
ENSODEG00000012729-10084.034ENSNBRG00000002568u2af2a10084.034Neolamprologus_brichardi
ENSODEG00000012729-10082.789ENSNLEG00000010562U2AF210090.997Nomascus_leucogenys
ENSODEG00000012729-8681.598ENSMEUG00000002346U2AF29081.598Notamacropus_eugenii
ENSODEG00000012729-9970.886ENSONIG00000009682-10067.511Oreochromis_niloticus
ENSODEG00000012729-10083.857ENSONIG00000012793u2af2a10083.857Oreochromis_niloticus
ENSODEG00000012729-10081.799ENSORLG00000011545u2af2a10081.684Oryzias_latipes
ENSODEG00000012729-10081.799ENSORLG00020006941u2af2a10081.684Oryzias_latipes_hni
ENSODEG00000012729-10081.799ENSORLG00015012843u2af2a10081.684Oryzias_latipes_hsok
ENSODEG00000012729-10083.613ENSOMEG00000011386u2af2a10083.368Oryzias_melastigma
ENSODEG00000012729-10094.737ENSOGAG00000007206-10094.737Otolemur_garnettii
ENSODEG00000012729-9851.586ENSOGAG00000034729-8058.400Otolemur_garnettii
ENSODEG00000012729-10083.229ENSOARG00000001091U2AF210083.229Ovis_aries
ENSODEG00000012729-10094.737ENSPPAG00000039782U2AF210094.737Pan_paniscus
ENSODEG00000012729-10094.737ENSPPRG00000013843U2AF210094.737Panthera_pardus
ENSODEG00000012729-9981.316ENSPTIG00000005489U2AF29087.681Panthera_tigris_altaica
ENSODEG00000012729-10094.737ENSPTRG00000011523U2AF210094.737Pan_troglodytes
ENSODEG00000012729-10094.105ENSPANG00000008459U2AF210094.105Papio_anubis
ENSODEG00000012729-9971.849ENSPKIG00000014878-10068.143Paramormyrops_kingsleyae
ENSODEG00000012729-10083.403ENSPKIG00000024346u2af2b9386.520Paramormyrops_kingsleyae
ENSODEG00000012729-9673.404ENSPSIG00000008014U2AF210073.404Pelodiscus_sinensis
ENSODEG00000012729-8279.901ENSPMGG00000022980u2af2a9278.417Periophthalmus_magnuspinnatus
ENSODEG00000012729-10094.947ENSPEMG00000007378U2af210094.947Peromyscus_maniculatus_bairdii
ENSODEG00000012729-8071.907ENSPMAG00000004097u2af2a8772.886Petromyzon_marinus
ENSODEG00000012729-10093.684ENSPCIG00000018013U2AF210093.684Phascolarctos_cinereus
ENSODEG00000012729-9970.042ENSPFOG00000006433-10067.722Poecilia_formosa
ENSODEG00000012729-9983.579ENSPFOG00000010799u2af2a10083.579Poecilia_formosa
ENSODEG00000012729-10083.613ENSPLAG00000014365u2af2a10083.613Poecilia_latipinna
ENSODEG00000012729-8474.690ENSPLAG00000003275-8974.020Poecilia_latipinna
ENSODEG00000012729-10083.613ENSPMEG00000002969u2af2a10083.613Poecilia_mexicana
ENSODEG00000012729-8474.442ENSPMEG00000003734-8973.775Poecilia_mexicana
ENSODEG00000012729-10083.613ENSPREG00000008739u2af2a10083.613Poecilia_reticulata
ENSODEG00000012729-9969.409ENSPREG00000013036-10074.342Poecilia_reticulata
ENSODEG00000012729-5689.170ENSPPYG00000010429-7889.170Pongo_abelii
ENSODEG00000012729-10078.361ENSPCAG00000014399-10078.361Procavia_capensis
ENSODEG00000012729-8676.341ENSPCAG00000003709-9976.341Procavia_capensis
ENSODEG00000012729-10094.737ENSPCOG00000025870U2AF210094.737Propithecus_coquereli
ENSODEG00000012729-10094.316ENSPVAG00000004540U2AF210094.316Pteropus_vampyrus
ENSODEG00000012729-9970.886ENSPNYG00000011605-10067.511Pundamilia_nyererei
ENSODEG00000012729-10084.034ENSPNYG00000001438u2af2a10084.034Pundamilia_nyererei
ENSODEG00000012729-9971.097ENSPNAG00000007182-10067.511Pygocentrus_nattereri
ENSODEG00000012729-10080.713ENSPNAG00000017620u2af2a10080.000Pygocentrus_nattereri
ENSODEG00000012729-9981.474ENSPNAG00000027289u2af2b9980.842Pygocentrus_nattereri
ENSODEG00000012729-10094.105ENSRNOG00000015914U2af210094.105Rattus_norvegicus
ENSODEG00000012729-10094.526ENSRBIG00000041018U2AF210094.526Rhinopithecus_bieti
ENSODEG00000012729-8693.720ENSRROG00000031103-10093.720Rhinopithecus_roxellana
ENSODEG00000012729-10088.842ENSRROG00000031238-10088.842Rhinopithecus_roxellana
ENSODEG00000012729-10094.105ENSSBOG00000023891U2AF210094.105Saimiri_boliviensis_boliviensis
ENSODEG00000012729-6165.952ENSSHAG00000001167U2AF28571.429Sarcophilus_harrisii
ENSODEG00000012729-9970.588ENSSFOG00015003884-9475.000Scleropages_formosus
ENSODEG00000012729-8387.469ENSSFOG00015019182u2af2b8987.469Scleropages_formosus
ENSODEG00000012729-10082.773ENSSMAG00000012582u2af2a10082.773Scophthalmus_maximus
ENSODEG00000012729-9970.042ENSSMAG00000013779-10067.300Scophthalmus_maximus
ENSODEG00000012729-9983.789ENSSDUG00000009457u2af2a10083.789Seriola_dumerili
ENSODEG00000012729-9669.296ENSSDUG00000021434-8472.076Seriola_dumerili
ENSODEG00000012729-10083.824ENSSLDG00000022742u2af2a10083.824Seriola_lalandi_dorsalis
ENSODEG00000012729-9669.296ENSSLDG00000016151-8972.076Seriola_lalandi_dorsalis
ENSODEG00000012729-10089.234ENSSPUG00000010229U2AF210089.234Sphenodon_punctatus
ENSODEG00000012729-10084.034ENSSPAG00000022519u2af2a10084.034Stegastes_partitus
ENSODEG00000012729-9970.675ENSSPAG00000005241-10067.300Stegastes_partitus
ENSODEG00000012729-10094.105ENSSSCG00000034815U2AF210094.105Sus_scrofa
ENSODEG00000012729-8285.751ENSTRUG00000005514u2af2a9084.029Takifugu_rubripes
ENSODEG00000012729-10083.403ENSTNIG00000008106U2AF210083.403Tetraodon_nigroviridis
ENSODEG00000012729-8373.618ENSTNIG00000011257-10067.789Tetraodon_nigroviridis
ENSODEG00000012729-7688.378ENSTBEG00000009104U2AF210088.378Tupaia_belangeri
ENSODEG00000012729-10094.737ENSTTRG00000000987U2AF210094.737Tursiops_truncatus
ENSODEG00000012729-9691.466ENSUAMG00000019883U2AF210091.466Ursus_americanus
ENSODEG00000012729-9691.466ENSUMAG00000024586U2AF210091.466Ursus_maritimus
ENSODEG00000012729-9693.900ENSVVUG00000006956U2AF26793.900Vulpes_vulpes
ENSODEG00000012729-10087.397ENSXETG00000019128u2af210083.469Xenopus_tropicalis
ENSODEG00000012729-8288.295ENSXCOG00000019406u2af2a9286.486Xiphophorus_couchianus
ENSODEG00000012729-9970.675ENSXMAG00000000768-9667.089Xiphophorus_maculatus
ENSODEG00000012729-10083.613ENSXMAG00000011979u2af2a10083.613Xiphophorus_maculatus

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