EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012802 (Gene tree)
Gene ID: 101584692
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 67195 bases
Position: chrJH651516.1:3472498-3539692
Accession: 101584692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017364	Ago_hook	PF10427.9	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017584	TNRC6A-201	5622	XM_012513551	ENSODEP00000017364	1873 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012802	TNRC6A	97	36.642	ENSODEG00000013146	TNRC6B	98	37.163
ENSODEG00000012802	TNRC6A	85	40.326	ENSODEG00000012499	TNRC6C	97	41.097

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012802	TNRC6A	99	89.610	ENSG00000090905	TNRC6A	100	93.125	Homo_sapiens
ENSODEG00000012802	TNRC6A	98	87.213	ENSAMEG00000009333	TNRC6A	99	87.500	Ailuropoda_melanoleuca
ENSODEG00000012802	TNRC6A	97	76.263	ENSAPLG00000009978	TNRC6A	99	75.737	Anas_platyrhynchos
ENSODEG00000012802	TNRC6A	95	52.359	ENSACAG00000011857	TNRC6A	97	53.458	Anolis_carolinensis
ENSODEG00000012802	TNRC6A	99	89.301	ENSANAG00000025252	TNRC6A	99	89.672	Aotus_nancymaae
ENSODEG00000012802	TNRC6A	91	55.971	ENSAMXG00000019919	tnrc6a	99	56.199	Astyanax_mexicanus
ENSODEG00000012802	TNRC6A	99	88.924	ENSBTAG00000017999	TNRC6A	99	88.420	Bos_taurus
ENSODEG00000012802	TNRC6A	99	87.083	ENSCJAG00000020677	TNRC6A	99	88.177	Callithrix_jacchus
ENSODEG00000012802	TNRC6A	97	89.860	ENSCAFG00000017531	TNRC6A	98	89.752	Canis_familiaris
ENSODEG00000012802	TNRC6A	97	89.076	ENSCAFG00020021160	TNRC6A	99	88.750	Canis_lupus_dingo
ENSODEG00000012802	TNRC6A	99	88.500	ENSCHIG00000019448	TNRC6A	99	88.023	Capra_hircus
ENSODEG00000012802	TNRC6A	99	89.376	ENSTSYG00000012711	TNRC6A	99	89.271	Carlito_syrichta
ENSODEG00000012802	TNRC6A	99	91.073	ENSCPOG00000036684	TNRC6A	99	91.233	Cavia_porcellus
ENSODEG00000012802	TNRC6A	99	89.418	ENSCCAG00000033664	TNRC6A	99	89.735	Cebus_capucinus
ENSODEG00000012802	TNRC6A	99	89.385	ENSCATG00000019284	TNRC6A	99	90.043	Cercocebus_atys
ENSODEG00000012802	TNRC6A	99	87.262	ENSCLAG00000010217	TNRC6A	99	87.526	Chinchilla_lanigera
ENSODEG00000012802	TNRC6A	99	87.339	ENSCSAG00000006561	TNRC6A	99	87.545	Chlorocebus_sabaeus
ENSODEG00000012802	TNRC6A	93	83.784	ENSCHOG00000009374	TNRC6A	92	82.665	Choloepus_hoffmanni
ENSODEG00000012802	TNRC6A	91	78.835	ENSCPBG00000001881	TNRC6A	99	78.143	Chrysemys_picta_bellii
ENSODEG00000012802	TNRC6A	99	89.641	ENSCANG00000041549	TNRC6A	99	89.905	Colobus_angolensis_palliatus
ENSODEG00000012802	TNRC6A	99	88.700	ENSCGRG00001015021	Tnrc6a	99	89.024	Cricetulus_griseus_chok1gshd
ENSODEG00000012802	TNRC6A	99	88.129	ENSCGRG00000013351	Tnrc6a	99	88.453	Cricetulus_griseus_crigri
ENSODEG00000012802	TNRC6A	91	55.350	ENSDARG00000079688	tnrc6a	99	55.780	Danio_rerio
ENSODEG00000012802	TNRC6A	97	85.586	ENSDNOG00000013989	TNRC6A	98	85.480	Dasypus_novemcinctus
ENSODEG00000012802	TNRC6A	97	78.903	ENSETEG00000014658	TNRC6A	98	79.167	Echinops_telfairi
ENSODEG00000012802	TNRC6A	99	89.396	ENSEASG00005017693	TNRC6A	99	89.449	Equus_asinus_asinus
ENSODEG00000012802	TNRC6A	97	89.767	ENSECAG00000025056	TNRC6A	98	89.821	Equus_caballus
ENSODEG00000012802	TNRC6A	97	81.856	ENSEEUG00000004530	TNRC6A	98	81.489	Erinaceus_europaeus
ENSODEG00000012802	TNRC6A	99	89.148	ENSFCAG00000025236	TNRC6A	99	89.254	Felis_catus
ENSODEG00000012802	TNRC6A	97	74.413	ENSFALG00000003757	TNRC6A	99	74.373	Ficedula_albicollis
ENSODEG00000012802	TNRC6A	91	78.584	ENSGALG00000006068	TNRC6A	99	78.699	Gallus_gallus
ENSODEG00000012802	TNRC6A	91	78.059	ENSGAGG00000023209	TNRC6A	99	77.714	Gopherus_agassizii
ENSODEG00000012802	TNRC6A	99	89.451	ENSGGOG00000005137	TNRC6A	99	89.610	Gorilla_gorilla
ENSODEG00000012802	TNRC6A	99	89.597	ENSHGLG00000012474	-	99	89.703	Heterocephalus_glaber_female
ENSODEG00000012802	TNRC6A	95	71.964	ENSHGLG00000007368	-	93	71.324	Heterocephalus_glaber_female
ENSODEG00000012802	TNRC6A	99	89.685	ENSHGLG00100012496	-	99	89.631	Heterocephalus_glaber_male
ENSODEG00000012802	TNRC6A	99	87.012	ENSSTOG00000023394	TNRC6A	98	86.756	Ictidomys_tridecemlineatus
ENSODEG00000012802	TNRC6A	97	65.571	ENSLACG00000006277	TNRC6A	99	65.849	Latimeria_chalumnae
ENSODEG00000012802	TNRC6A	99	82.561	ENSLOCG00000005517	tnrc6a	92	82.561	Lepisosteus_oculatus
ENSODEG00000012802	TNRC6A	98	88.625	ENSLAFG00000004209	TNRC6A	99	89.257	Loxodonta_africana
ENSODEG00000012802	TNRC6A	97	86.663	ENSMFAG00000003824	TNRC6A	99	86.925	Macaca_fascicularis
ENSODEG00000012802	TNRC6A	99	89.693	ENSMMUG00000020428	TNRC6A	99	89.958	Macaca_mulatta
ENSODEG00000012802	TNRC6A	99	89.222	ENSMNEG00000034854	TNRC6A	99	89.537	Macaca_nemestrina
ENSODEG00000012802	TNRC6A	97	85.968	ENSMLEG00000042737	TNRC6A	97	86.802	Mandrillus_leucophaeus
ENSODEG00000012802	TNRC6A	95	76.391	ENSMGAG00000006455	TNRC6A	93	76.121	Meleagris_gallopavo
ENSODEG00000012802	TNRC6A	99	88.948	ENSMAUG00000012750	Tnrc6a	99	89.113	Mesocricetus_auratus
ENSODEG00000012802	TNRC6A	99	90.032	ENSMICG00000030685	TNRC6A	99	89.873	Microcebus_murinus
ENSODEG00000012802	TNRC6A	99	88.617	ENSMOCG00000000152	Tnrc6a	99	89.048	Microtus_ochrogaster
ENSODEG00000012802	TNRC6A	97	75.878	ENSMODG00000016348	TNRC6A	98	75.327	Monodelphis_domestica
ENSODEG00000012802	TNRC6A	99	87.906	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	88.232	Mus_caroli
ENSODEG00000012802	TNRC6A	99	88.404	ENSMUSG00000052707	Tnrc6a	99	88.517	Mus_musculus
ENSODEG00000012802	TNRC6A	99	88.357	MGP_PahariEiJ_G0013635	Tnrc6a	99	88.470	Mus_pahari
ENSODEG00000012802	TNRC6A	99	85.833	MGP_SPRETEiJ_G0031539	Tnrc6a	100	86.643	Mus_spretus
ENSODEG00000012802	TNRC6A	97	79.935	ENSMPUG00000012324	TNRC6A	99	79.653	Mustela_putorius_furo
ENSODEG00000012802	TNRC6A	97	85.692	ENSMLUG00000002701	TNRC6A	99	85.586	Myotis_lucifugus
ENSODEG00000012802	TNRC6A	99	89.024	ENSNGAG00000020702	Tnrc6a	99	88.812	Nannospalax_galili
ENSODEG00000012802	TNRC6A	97	88.432	ENSNLEG00000011851	TNRC6A	98	88.967	Nomascus_leucogenys
ENSODEG00000012802	TNRC6A	74	77.901	ENSMEUG00000015959	-	74	77.901	Notamacropus_eugenii
ENSODEG00000012802	TNRC6A	95	95.522	ENSOPRG00000005819	TNRC6A	95	95.522	Ochotona_princeps
ENSODEG00000012802	TNRC6A	88	77.012	ENSOANG00000007672	TNRC6A	99	76.549	Ornithorhynchus_anatinus
ENSODEG00000012802	TNRC6A	97	85.661	ENSOCUG00000004325	TNRC6A	99	85.503	Oryctolagus_cuniculus
ENSODEG00000012802	TNRC6A	99	87.868	ENSOGAG00000006666	TNRC6A	99	87.661	Otolemur_garnettii
ENSODEG00000012802	TNRC6A	99	85.340	ENSOARG00000017950	TNRC6A	98	89.529	Ovis_aries
ENSODEG00000012802	TNRC6A	99	89.216	ENSPPAG00000028379	TNRC6A	99	89.427	Pan_paniscus
ENSODEG00000012802	TNRC6A	99	89.148	ENSPPRG00000005861	TNRC6A	99	89.254	Panthera_pardus
ENSODEG00000012802	TNRC6A	99	88.350	ENSPTIG00000006346	TNRC6A	99	88.245	Panthera_tigris_altaica
ENSODEG00000012802	TNRC6A	98	86.929	ENSPTRG00000007898	TNRC6A	99	87.051	Pan_troglodytes
ENSODEG00000012802	TNRC6A	99	86.993	ENSPANG00000018523	TNRC6A	99	86.835	Papio_anubis
ENSODEG00000012802	TNRC6A	91	77.602	ENSPKIG00000012859	tnrc6a	99	75.369	Paramormyrops_kingsleyae
ENSODEG00000012802	TNRC6A	78	74.426	ENSPSIG00000003965	TNRC6A	100	73.684	Pelodiscus_sinensis
ENSODEG00000012802	TNRC6A	99	88.676	ENSPEMG00000016318	Tnrc6a	99	89.214	Peromyscus_maniculatus_bairdii
ENSODEG00000012802	TNRC6A	97	78.882	ENSPCIG00000012106	TNRC6A	99	78.614	Phascolarctos_cinereus
ENSODEG00000012802	TNRC6A	99	86.749	ENSPPYG00000007202	TNRC6A	99	86.903	Pongo_abelii
ENSODEG00000012802	TNRC6A	94	91.753	ENSPCAG00000008260	TNRC6A	93	91.753	Procavia_capensis
ENSODEG00000012802	TNRC6A	99	87.757	ENSPCOG00000010134	TNRC6A	99	87.599	Propithecus_coquereli
ENSODEG00000012802	TNRC6A	88	66.860	ENSPVAG00000012066	TNRC6A	97	68.597	Pteropus_vampyrus
ENSODEG00000012802	TNRC6A	99	87.092	ENSRNOG00000024737	Tnrc6a	99	87.151	Rattus_norvegicus
ENSODEG00000012802	TNRC6A	97	90.070	ENSRBIG00000014222	TNRC6A	98	90.286	Rhinopithecus_bieti
ENSODEG00000012802	TNRC6A	99	87.558	ENSRROG00000032360	TNRC6A	99	87.816	Rhinopithecus_roxellana
ENSODEG00000012802	TNRC6A	97	88.070	ENSSBOG00000036197	TNRC6A	99	88.987	Saimiri_boliviensis_boliviensis
ENSODEG00000012802	TNRC6A	91	79.454	ENSSHAG00000008811	TNRC6A	99	79.340	Sarcophilus_harrisii
ENSODEG00000012802	TNRC6A	91	81.674	ENSSFOG00015008920	tnrc6a	99	74.464	Scleropages_formosus
ENSODEG00000012802	TNRC6A	71	74.580	ENSSARG00000002479	TNRC6A	88	75.060	Sorex_araneus
ENSODEG00000012802	TNRC6A	91	75.259	ENSSPUG00000010525	TNRC6A	99	74.799	Sphenodon_punctatus
ENSODEG00000012802	TNRC6A	99	88.520	ENSSSCG00000038870	TNRC6A	99	91.270	Sus_scrofa
ENSODEG00000012802	TNRC6A	97	77.231	ENSTGUG00000006142	TNRC6A	99	76.455	Taeniopygia_guttata
ENSODEG00000012802	TNRC6A	98	84.716	ENSTBEG00000014965	TNRC6A	99	84.934	Tupaia_belangeri
ENSODEG00000012802	TNRC6A	91	87.723	ENSTTRG00000002008	TNRC6A	90	85.816	Tursiops_truncatus
ENSODEG00000012802	TNRC6A	79	89.075	ENSUAMG00000006656	-	93	89.008	Ursus_americanus
ENSODEG00000012802	TNRC6A	99	87.297	ENSUMAG00000008274	TNRC6A	99	91.391	Ursus_maritimus
ENSODEG00000012802	TNRC6A	55	81.250	ENSVPAG00000010764	-	57	80.729	Vicugna_pacos
ENSODEG00000012802	TNRC6A	99	89.111	ENSVVUG00000005380	TNRC6A	99	89.006	Vulpes_vulpes
ENSODEG00000012802	TNRC6A	95	62.091	ENSXETG00000030437	TNRC6A	99	62.123	Xenopus_tropicalis