EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012831 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 4712 bases
Position: chrJH651552.1:4588782-4593493
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017403	RRM_1	PF00076.22	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017624	-	591	-	ENSODEP00000017403	197 (aa)	-	-

Gene Model

Click here to download ENSODEG00000012831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012831	-	95	36.321	ENSODEG00000012803	-	67	36.538
ENSODEG00000012831	-	99	53.982	ENSODEG00000001012	RALYL	76	52.444
ENSODEG00000012831	-	95	37.811	ENSODEG00000017188	-	68	35.821
ENSODEG00000012831	-	95	42.786	ENSODEG00000001160	-	69	42.289
ENSODEG00000012831	-	95	40.909	ENSODEG00000020161	-	70	41.204
ENSODEG00000012831	-	73	83.916	ENSODEG00000011160	-	58	83.916
ENSODEG00000012831	-	100	82.381	ENSODEG00000008369	-	70	82.381
ENSODEG00000012831	-	95	41.364	ENSODEG00000000603	-	69	41.860
ENSODEG00000012831	-	95	44.444	ENSODEG00000008102	-	70	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012831	-	99	82.143	ENSG00000125970	RALY	100	73.481	Homo_sapiens
ENSODEG00000012831	-	99	59.716	ENSAPOG00000001026	raly	72	59.716	Acanthochromis_polyacanthus
ENSODEG00000012831	-	100	78.404	ENSAMEG00000009050	RALY	70	78.404	Ailuropoda_melanoleuca
ENSODEG00000012831	-	100	62.326	ENSACIG00000024288	raly	82	62.791	Amphilophus_citrinellus
ENSODEG00000012831	-	99	59.716	ENSAOCG00000009883	raly	64	59.716	Amphiprion_ocellaris
ENSODEG00000012831	-	99	60.190	ENSAPEG00000024106	raly	65	60.190	Amphiprion_percula
ENSODEG00000012831	-	100	61.502	ENSATEG00000004870	raly	69	61.502	Anabas_testudineus
ENSODEG00000012831	-	100	69.484	ENSAPLG00000012983	RALY	75	70.423	Anas_platyrhynchos
ENSODEG00000012831	-	100	69.953	ENSACAG00000008983	RALY	66	68.545	Anolis_carolinensis
ENSODEG00000012831	-	99	83.163	ENSANAG00000019376	RALY	67	83.163	Aotus_nancymaae
ENSODEG00000012831	-	100	65.990	ENSACLG00000007561	raly	64	67.005	Astatotilapia_calliptera
ENSODEG00000012831	-	100	84.264	ENSBTAG00000016524	RALY	70	84.264	Bos_taurus
ENSODEG00000012831	-	99	82.143	ENSCJAG00000009449	-	67	82.143	Callithrix_jacchus
ENSODEG00000012831	-	99	83.163	ENSCJAG00000018361	-	67	83.163	Callithrix_jacchus
ENSODEG00000012831	-	100	77.934	ENSCAFG00000007490	RALY	73	77.934	Canis_familiaris
ENSODEG00000012831	-	100	78.404	ENSCAFG00020005069	RALY	73	78.404	Canis_lupus_dingo
ENSODEG00000012831	-	100	77.934	ENSCHIG00000026609	RALY	72	77.934	Capra_hircus
ENSODEG00000012831	-	100	82.741	ENSTSYG00000002598	RALY	71	82.741	Carlito_syrichta
ENSODEG00000012831	-	100	79.695	ENSCAPG00000008110	RALY	93	79.695	Cavia_aperea
ENSODEG00000012831	-	100	86.802	ENSCPOG00000000309	RALY	93	86.802	Cavia_porcellus
ENSODEG00000012831	-	99	83.163	ENSCCAG00000024548	RALY	67	83.163	Cebus_capucinus
ENSODEG00000012831	-	99	82.653	ENSCATG00000031769	RALY	66	82.653	Cercocebus_atys
ENSODEG00000012831	-	100	86.294	ENSCLAG00000016899	RALY	67	86.294	Chinchilla_lanigera
ENSODEG00000012831	-	99	76.415	ENSCSAG00000012199	RALY	67	76.415	Chlorocebus_sabaeus
ENSODEG00000012831	-	100	69.953	ENSCHOG00000000266	RALY	91	69.953	Choloepus_hoffmanni
ENSODEG00000012831	-	100	69.484	ENSCPBG00000019164	RALY	79	69.014	Chrysemys_picta_bellii
ENSODEG00000012831	-	99	82.653	ENSCANG00000037952	RALY	67	82.653	Colobus_angolensis_palliatus
ENSODEG00000012831	-	100	84.772	ENSCGRG00001014652	Raly	65	84.772	Cricetulus_griseus_chok1gshd
ENSODEG00000012831	-	100	84.772	ENSCGRG00000011726	Raly	65	84.772	Cricetulus_griseus_crigri
ENSODEG00000012831	-	100	72.081	ENSDARG00000059972	raly	75	72.081	Danio_rerio
ENSODEG00000012831	-	100	78.873	ENSDNOG00000003227	-	76	78.873	Dasypus_novemcinctus
ENSODEG00000012831	-	100	85.279	ENSDNOG00000046782	-	72	85.279	Dasypus_novemcinctus
ENSODEG00000012831	-	100	83.756	ENSDORG00000013400	Raly	93	83.756	Dipodomys_ordii
ENSODEG00000012831	-	100	69.484	ENSETEG00000012464	-	97	69.484	Echinops_telfairi
ENSODEG00000012831	-	89	62.500	ENSETEG00000001919	-	63	62.500	Echinops_telfairi
ENSODEG00000012831	-	100	84.264	ENSEASG00005008501	RALY	70	84.264	Equus_asinus_asinus
ENSODEG00000012831	-	100	84.264	ENSECAG00000037642	-	71	77.934	Equus_caballus
ENSODEG00000012831	-	100	84.264	ENSECAG00000030217	-	71	77.934	Equus_caballus
ENSODEG00000012831	-	100	84.264	ENSECAG00000012357	RALY	71	77.934	Equus_caballus
ENSODEG00000012831	-	99	66.038	ENSEEUG00000005356	RALY	69	63.208	Erinaceus_europaeus
ENSODEG00000012831	-	100	69.543	ENSELUG00000011138	raly	78	59.565	Esox_lucius
ENSODEG00000012831	-	100	84.772	ENSFCAG00000025252	RALY	72	78.404	Felis_catus
ENSODEG00000012831	-	100	86.294	ENSFDAG00000010175	RALY	100	72.941	Fukomys_damarensis
ENSODEG00000012831	-	100	61.033	ENSFHEG00000018618	raly	81	61.033	Fundulus_heteroclitus
ENSODEG00000012831	-	100	47.907	ENSGMOG00000012589	raly	97	48.372	Gadus_morhua
ENSODEG00000012831	-	100	70.423	ENSGALG00000033696	RALY	79	69.953	Gallus_gallus
ENSODEG00000012831	-	100	57.477	ENSGACG00000003636	raly	77	57.477	Gasterosteus_aculeatus
ENSODEG00000012831	-	100	67.136	ENSGAGG00000016266	RALY	66	69.014	Gopherus_agassizii
ENSODEG00000012831	-	99	82.143	ENSGGOG00000022709	RALY	68	82.143	Gorilla_gorilla
ENSODEG00000012831	-	100	66.497	ENSHBUG00000021321	raly	67	66.497	Haplochromis_burtoni
ENSODEG00000012831	-	100	81.218	ENSHGLG00000021175	-	68	81.218	Heterocephalus_glaber_female
ENSODEG00000012831	-	100	85.279	ENSHGLG00000017779	-	93	85.279	Heterocephalus_glaber_female
ENSODEG00000012831	-	100	85.279	ENSHGLG00100003933	RALY	100	82.979	Heterocephalus_glaber_male
ENSODEG00000012831	-	100	65.990	ENSHGLG00100000278	-	76	65.990	Heterocephalus_glaber_male
ENSODEG00000012831	-	100	70.792	ENSHGLG00100003829	-	56	90.210	Heterocephalus_glaber_male
ENSODEG00000012831	-	100	48.372	ENSHCOG00000012268	raly	86	47.143	Hippocampus_comes
ENSODEG00000012831	-	100	85.279	ENSSTOG00000008810	RALY	70	78.873	Ictidomys_tridecemlineatus
ENSODEG00000012831	-	100	83.756	ENSJJAG00000008473	Raly	100	82.979	Jaculus_jaculus
ENSODEG00000012831	-	100	65.990	ENSKMAG00000015656	raly	79	65.990	Kryptolebias_marmoratus
ENSODEG00000012831	-	100	59.259	ENSLBEG00000022656	raly	82	60.185	Labrus_bergylta
ENSODEG00000012831	-	100	65.258	ENSLACG00000008596	RALY	75	65.258	Latimeria_chalumnae
ENSODEG00000012831	-	100	66.197	ENSLOCG00000007219	raly	76	67.136	Lepisosteus_oculatus
ENSODEG00000012831	-	100	78.873	ENSLAFG00000000321	RALY	68	78.873	Loxodonta_africana
ENSODEG00000012831	-	99	82.653	ENSMFAG00000033131	RALY	67	82.653	Macaca_fascicularis
ENSODEG00000012831	-	99	76.415	ENSMMUG00000018093	RALY	69	76.415	Macaca_mulatta
ENSODEG00000012831	-	99	82.653	ENSMNEG00000044988	RALY	67	82.653	Macaca_nemestrina
ENSODEG00000012831	-	99	82.653	ENSMLEG00000028900	RALY	67	82.653	Mandrillus_leucophaeus
ENSODEG00000012831	-	100	67.005	ENSMAMG00000012529	raly	59	68.020	Mastacembelus_armatus
ENSODEG00000012831	-	100	65.990	ENSMZEG00005016550	raly	64	67.005	Maylandia_zebra
ENSODEG00000012831	-	100	70.423	ENSMGAG00000002214	RALY	70	69.953	Meleagris_gallopavo
ENSODEG00000012831	-	100	84.772	ENSMAUG00000005739	Raly	93	84.772	Mesocricetus_auratus
ENSODEG00000012831	-	100	84.264	ENSMICG00000039074	RALY	70	84.264	Microcebus_murinus
ENSODEG00000012831	-	100	84.772	ENSMOCG00000009450	Raly	65	84.772	Microtus_ochrogaster
ENSODEG00000012831	-	100	61.395	ENSMMOG00000013788	raly	82	62.326	Mola_mola
ENSODEG00000012831	-	100	64.414	ENSMODG00000002819	-	77	64.414	Monodelphis_domestica
ENSODEG00000012831	-	100	60.930	ENSMALG00000007071	raly	55	60.648	Monopterus_albus
ENSODEG00000012831	-	100	84.772	MGP_CAROLIEiJ_G0024519	Raly	100	82.270	Mus_caroli
ENSODEG00000012831	-	100	84.772	ENSMUSG00000027593	Raly	100	82.270	Mus_musculus
ENSODEG00000012831	-	100	84.772	MGP_PahariEiJ_G0025963	Raly	100	82.270	Mus_pahari
ENSODEG00000012831	-	100	84.772	MGP_SPRETEiJ_G0025441	Raly	100	82.270	Mus_spretus
ENSODEG00000012831	-	100	77.934	ENSMPUG00000017820	RALY	73	77.934	Mustela_putorius_furo
ENSODEG00000012831	-	100	84.264	ENSMLUG00000005330	-	71	84.264	Myotis_lucifugus
ENSODEG00000012831	-	100	69.953	ENSMLUG00000027895	-	71	69.014	Myotis_lucifugus
ENSODEG00000012831	-	100	84.264	ENSNGAG00000001263	Raly	93	84.264	Nannospalax_galili
ENSODEG00000012831	-	100	67.005	ENSNBRG00000014761	raly	67	67.005	Neolamprologus_brichardi
ENSODEG00000012831	-	72	83.439	ENSNLEG00000010031	-	61	83.439	Nomascus_leucogenys
ENSODEG00000012831	-	100	77.465	ENSOPRG00000008423	RALY	70	77.465	Ochotona_princeps
ENSODEG00000012831	-	100	60.648	ENSONIG00000004416	raly	74	61.111	Oreochromis_niloticus
ENSODEG00000012831	-	100	77.465	ENSOCUG00000000477	RALY	58	77.465	Oryctolagus_cuniculus
ENSODEG00000012831	-	100	71.831	ENSOGAG00000032337	RALY	68	71.831	Otolemur_garnettii
ENSODEG00000012831	-	100	77.934	ENSOARG00000008957	RALY	72	77.934	Ovis_aries
ENSODEG00000012831	-	99	82.143	ENSPPAG00000034951	RALY	68	82.143	Pan_paniscus
ENSODEG00000012831	-	100	84.772	ENSPPRG00000014593	RALY	70	84.772	Panthera_pardus
ENSODEG00000012831	-	100	84.772	ENSPTIG00000021910	RALY	70	84.772	Panthera_tigris_altaica
ENSODEG00000012831	-	99	82.143	ENSPTRG00000013410	RALY	67	82.143	Pan_troglodytes
ENSODEG00000012831	-	99	82.653	ENSPANG00000018093	RALY	67	82.653	Papio_anubis
ENSODEG00000012831	-	100	64.486	ENSPKIG00000004894	raly	76	64.486	Paramormyrops_kingsleyae
ENSODEG00000012831	-	100	57.589	ENSPSIG00000017714	RALY	77	58.036	Pelodiscus_sinensis
ENSODEG00000012831	-	52	65.686	ENSPMGG00000007007	raly	94	65.686	Periophthalmus_magnuspinnatus
ENSODEG00000012831	-	100	84.772	ENSPEMG00000021466	Raly	69	84.772	Peromyscus_maniculatus_bairdii
ENSODEG00000012831	-	100	67.136	ENSPCIG00000011153	-	76	67.136	Phascolarctos_cinereus
ENSODEG00000012831	-	99	76.415	ENSPPYG00000010932	RALY	70	76.415	Pongo_abelii
ENSODEG00000012831	-	100	69.953	ENSPCAG00000016867	RALY	71	69.953	Procavia_capensis
ENSODEG00000012831	-	100	83.249	ENSPCOG00000016363	RALY	70	83.249	Propithecus_coquereli
ENSODEG00000012831	-	100	77.934	ENSPVAG00000015827	RALY	73	77.934	Pteropus_vampyrus
ENSODEG00000012831	-	100	65.990	ENSPNYG00000011247	raly	63	67.005	Pundamilia_nyererei
ENSODEG00000012831	-	100	65.728	ENSPNAG00000011812	raly	76	65.728	Pygocentrus_nattereri
ENSODEG00000012831	-	100	84.264	ENSRNOG00000017405	Raly	67	84.264	Rattus_norvegicus
ENSODEG00000012831	-	99	83.163	ENSRBIG00000030203	RALY	66	83.163	Rhinopithecus_bieti
ENSODEG00000012831	-	99	83.163	ENSRROG00000038781	RALY	66	83.163	Rhinopithecus_roxellana
ENSODEG00000012831	-	99	83.163	ENSSBOG00000001418	RALY	67	83.163	Saimiri_boliviensis_boliviensis
ENSODEG00000012831	-	100	71.574	ENSSHAG00000016830	RALY	67	72.081	Sarcophilus_harrisii
ENSODEG00000012831	-	100	64.019	ENSSFOG00015012304	raly	80	64.486	Scleropages_formosus
ENSODEG00000012831	-	100	64.975	ENSSMAG00000001107	raly	67	65.482	Scophthalmus_maximus
ENSODEG00000012831	-	100	60.648	ENSSDUG00000002411	raly	72	61.111	Seriola_dumerili
ENSODEG00000012831	-	100	61.033	ENSSLDG00000017872	raly	71	61.972	Seriola_lalandi_dorsalis
ENSODEG00000012831	-	99	65.566	ENSSARG00000002763	-	69	65.566	Sorex_araneus
ENSODEG00000012831	-	100	70.423	ENSSPUG00000006251	RALY	82	69.953	Sphenodon_punctatus
ENSODEG00000012831	-	91	56.345	ENSSPAG00000022480	-	76	57.360	Stegastes_partitus
ENSODEG00000012831	-	100	84.772	ENSSSCG00000007275	RALY	63	84.772	Sus_scrofa
ENSODEG00000012831	-	100	69.953	ENSTGUG00000003715	RALY	99	69.484	Taeniopygia_guttata
ENSODEG00000012831	-	100	65.258	ENSTBEG00000009812	RALY	69	65.258	Tupaia_belangeri
ENSODEG00000012831	-	100	77.570	ENSTTRG00000006590	RALY	71	77.570	Tursiops_truncatus
ENSODEG00000012831	-	100	84.772	ENSUAMG00000006993	RALY	73	84.772	Ursus_americanus
ENSODEG00000012831	-	100	84.772	ENSUMAG00000024106	RALY	73	78.404	Ursus_maritimus
ENSODEG00000012831	-	80	73.410	ENSVPAG00000000373	RALY	57	74.706	Vicugna_pacos
ENSODEG00000012831	-	100	78.404	ENSVVUG00000004546	RALY	73	78.404	Vulpes_vulpes
ENSODEG00000012831	-	100	61.062	ENSXETG00000019514	raly	78	61.062	Xenopus_tropicalis