EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000012873 (Gene tree)
Gene ID: 101573713
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 34143 bases
Position: chrJH651560.1:7225235-7259377
Accession: 101573713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017462	KH_1	PF00013.29	1.5e-51	1	3
ENSODEP00000017462	KH_1	PF00013.29	1.5e-51	2	3
ENSODEP00000017462	KH_1	PF00013.29	1.5e-51	3	3
ENSODEP00000017462	KH_2	PF07650.17	8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017685	PCBP3-201	1086	XM_004631807	ENSODEP00000017462	361 (aa)	XP_004631865	-

Gene Model

Click here to download ENSODEG00000012873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000012873	PCBP3	66	42.105	ENSODEG00000010355	-	57	42.105
ENSODEG00000012873	PCBP3	72	30.088	ENSODEG00000002600	-	50	40.625
ENSODEG00000012873	PCBP3	90	63.714	ENSODEG00000013052	-	99	63.714
ENSODEG00000012873	PCBP3	91	65.684	ENSODEG00000006995	-	99	65.684
ENSODEG00000012873	PCBP3	86	58.438	ENSODEG00000018230	PCBP4	73	58.438
ENSODEG00000012873	PCBP3	91	75.740	ENSODEG00000013186	PCBP2	99	75.740
ENSODEG00000012873	PCBP3	63	50.000	ENSODEG00000005637	HNRNPK	53	50.000
ENSODEG00000012873	PCBP3	91	66.289	ENSODEG00000020292	-	94	66.289
ENSODEG00000012873	PCBP3	81	53.211	ENSODEG00000015604	-	97	53.211
ENSODEG00000012873	PCBP3	84	40.351	ENSODEG00000001059	NOVA1	65	40.351
ENSODEG00000012873	PCBP3	91	61.538	ENSODEG00000003534	-	99	61.538
ENSODEG00000012873	PCBP3	84	36.364	ENSODEG00000001231	IGF2BP2	65	36.364
ENSODEG00000012873	PCBP3	91	54.348	ENSODEG00000000263	PCBP1	99	54.348
ENSODEG00000012873	PCBP3	66	39.474	ENSODEG00000013084	-	57	39.474
ENSODEG00000012873	PCBP3	91	56.098	ENSODEG00000013422	-	99	56.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012873	PCBP3	100	95.935	ENSG00000183570	PCBP3	99	95.935	Homo_sapiens
ENSODEG00000012873	PCBP3	91	69.388	ENSAPOG00000023735	zgc:110045	99	69.388	Acanthochromis_polyacanthus
ENSODEG00000012873	PCBP3	91	69.436	ENSACIG00000002577	zgc:110045	96	76.847	Amphilophus_citrinellus
ENSODEG00000012873	PCBP3	73	72.906	ENSAOCG00000005266	zgc:110045	97	72.906	Amphiprion_ocellaris
ENSODEG00000012873	PCBP3	89	69.670	ENSAPEG00000000729	zgc:110045	72	69.670	Amphiprion_percula
ENSODEG00000012873	PCBP3	67	66.939	ENSATEG00000011191	zgc:110045	65	66.939	Anabas_testudineus
ENSODEG00000012873	PCBP3	89	70.270	ENSACLG00000019285	zgc:110045	72	70.270	Astatotilapia_calliptera
ENSODEG00000012873	PCBP3	100	90.515	ENSBTAG00000030775	PCBP3	100	92.697	Bos_taurus
ENSODEG00000012873	PCBP3	100	95.664	ENSCAFG00000011907	PCBP3	99	95.664	Canis_familiaris
ENSODEG00000012873	PCBP3	99	97.784	ENSCHIG00000015841	PCBP3	98	97.784	Capra_hircus
ENSODEG00000012873	PCBP3	78	87.446	ENSTSYG00000005254	PCBP3	94	87.446	Carlito_syrichta
ENSODEG00000012873	PCBP3	99	80.609	ENSCAPG00000006767	PCBP3	91	80.609	Cavia_aperea
ENSODEG00000012873	PCBP3	100	97.019	ENSCPOG00000003648	PCBP3	99	97.019	Cavia_porcellus
ENSODEG00000012873	PCBP3	100	95.935	ENSCCAG00000024561	PCBP3	99	95.935	Cebus_capucinus
ENSODEG00000012873	PCBP3	100	95.664	ENSCATG00000038419	PCBP3	100	96.143	Cercocebus_atys
ENSODEG00000012873	PCBP3	100	97.290	ENSCLAG00000006667	PCBP3	99	97.290	Chinchilla_lanigera
ENSODEG00000012873	PCBP3	100	95.393	ENSCANG00000026757	PCBP3	99	95.393	Colobus_angolensis_palliatus
ENSODEG00000012873	PCBP3	100	96.477	ENSCGRG00001006836	Pcbp3	99	96.477	Cricetulus_griseus_chok1gshd
ENSODEG00000012873	PCBP3	100	96.477	ENSCGRG00000001837	Pcbp3	99	96.477	Cricetulus_griseus_crigri
ENSODEG00000012873	PCBP3	91	68.805	ENSCSEG00000010020	zgc:110045	99	68.805	Cynoglossus_semilaevis
ENSODEG00000012873	PCBP3	71	75.258	ENSCVAG00000004726	zgc:110045	89	75.258	Cyprinodon_variegatus
ENSODEG00000012873	PCBP3	72	74.074	ENSDARG00000057141	zgc:110045	94	74.074	Danio_rerio
ENSODEG00000012873	PCBP3	99	92.916	ENSDNOG00000049518	PCBP3	100	92.916	Dasypus_novemcinctus
ENSODEG00000012873	PCBP3	81	82.857	ENSDORG00000003640	Pcbp3	99	82.857	Dipodomys_ordii
ENSODEG00000012873	PCBP3	88	69.748	ENSEBUG00000009697	zgc:110045	96	75.773	Eptatretus_burgeri
ENSODEG00000012873	PCBP3	100	91.057	ENSEASG00005007068	PCBP3	99	91.057	Equus_asinus_asinus
ENSODEG00000012873	PCBP3	100	91.057	ENSECAG00000012413	PCBP3	99	91.057	Equus_caballus
ENSODEG00000012873	PCBP3	89	68.657	ENSELUG00000019784	zgc:110045	72	68.657	Esox_lucius
ENSODEG00000012873	PCBP3	100	95.935	ENSFCAG00000014812	PCBP3	99	95.935	Felis_catus
ENSODEG00000012873	PCBP3	100	96.206	ENSFDAG00000009117	PCBP3	99	96.206	Fukomys_damarensis
ENSODEG00000012873	PCBP3	88	65.789	ENSFHEG00000018838	-	92	73.134	Fundulus_heteroclitus
ENSODEG00000012873	PCBP3	90	66.571	ENSGMOG00000005953	zgc:110045	98	66.571	Gadus_morhua
ENSODEG00000012873	PCBP3	71	75.243	ENSGAFG00000017864	zgc:110045	91	75.243	Gambusia_affinis
ENSODEG00000012873	PCBP3	91	69.186	ENSGACG00000003044	zgc:110045	99	69.186	Gasterosteus_aculeatus
ENSODEG00000012873	PCBP3	100	95.664	ENSGGOG00000003683	PCBP3	99	95.664	Gorilla_gorilla
ENSODEG00000012873	PCBP3	91	69.971	ENSHBUG00000012495	zgc:110045	99	69.971	Haplochromis_burtoni
ENSODEG00000012873	PCBP3	99	95.924	ENSHGLG00000018620	PCBP3	99	97.443	Heterocephalus_glaber_female
ENSODEG00000012873	PCBP3	99	95.924	ENSHGLG00100013590	PCBP3	99	97.443	Heterocephalus_glaber_male
ENSODEG00000012873	PCBP3	81	73.206	ENSHCOG00000000818	zgc:110045	96	73.206	Hippocampus_comes
ENSODEG00000012873	PCBP3	71	71.498	ENSIPUG00000003932	zgc:110045	77	71.498	Ictalurus_punctatus
ENSODEG00000012873	PCBP3	100	96.748	ENSSTOG00000007178	PCBP3	99	96.748	Ictidomys_tridecemlineatus
ENSODEG00000012873	PCBP3	100	96.206	ENSJJAG00000021192	Pcbp3	99	96.206	Jaculus_jaculus
ENSODEG00000012873	PCBP3	76	76.720	ENSKMAG00000016179	-	90	76.720	Kryptolebias_marmoratus
ENSODEG00000012873	PCBP3	91	67.930	ENSLBEG00000023074	zgc:110045	99	67.930	Labrus_bergylta
ENSODEG00000012873	PCBP3	92	97.633	ENSLAFG00000020835	PCBP3	100	97.633	Loxodonta_africana
ENSODEG00000012873	PCBP3	100	95.664	ENSMFAG00000034574	PCBP3	100	95.652	Macaca_fascicularis
ENSODEG00000012873	PCBP3	100	95.664	ENSMMUG00000003825	PCBP3	99	95.664	Macaca_mulatta
ENSODEG00000012873	PCBP3	100	95.664	ENSMNEG00000035551	PCBP3	100	95.652	Macaca_nemestrina
ENSODEG00000012873	PCBP3	100	95.664	ENSMLEG00000038785	PCBP3	100	95.652	Mandrillus_leucophaeus
ENSODEG00000012873	PCBP3	88	69.578	ENSMAMG00000014389	zgc:110045	99	69.578	Mastacembelus_armatus
ENSODEG00000012873	PCBP3	89	70.270	ENSMZEG00005011785	zgc:110045	72	70.270	Maylandia_zebra
ENSODEG00000012873	PCBP3	99	98.050	ENSMAUG00000007036	Pcbp3	98	98.050	Mesocricetus_auratus
ENSODEG00000012873	PCBP3	100	95.393	ENSMICG00000012679	PCBP3	99	95.393	Microcebus_murinus
ENSODEG00000012873	PCBP3	100	96.206	ENSMOCG00000016127	Pcbp3	99	96.206	Microtus_ochrogaster
ENSODEG00000012873	PCBP3	74	84.302	ENSMMOG00000008399	zgc:110045	85	84.302	Mola_mola
ENSODEG00000012873	PCBP3	76	79.781	ENSMALG00000008763	zgc:110045	92	79.781	Monopterus_albus
ENSODEG00000012873	PCBP3	100	96.206	MGP_CAROLIEiJ_G0015475	Pcbp3	99	96.206	Mus_caroli
ENSODEG00000012873	PCBP3	100	95.935	ENSMUSG00000001120	Pcbp3	99	95.935	Mus_musculus
ENSODEG00000012873	PCBP3	100	96.206	MGP_PahariEiJ_G0030889	Pcbp3	99	96.206	Mus_pahari
ENSODEG00000012873	PCBP3	100	96.206	MGP_SPRETEiJ_G0016288	Pcbp3	99	96.206	Mus_spretus
ENSODEG00000012873	PCBP3	99	91.576	ENSMLUG00000003074	PCBP3	99	91.576	Myotis_lucifugus
ENSODEG00000012873	PCBP3	100	95.664	ENSNGAG00000005416	Pcbp3	99	95.664	Nannospalax_galili
ENSODEG00000012873	PCBP3	89	70.270	ENSNBRG00000017646	zgc:110045	72	70.270	Neolamprologus_brichardi
ENSODEG00000012873	PCBP3	100	96.206	ENSNLEG00000002639	PCBP3	99	96.206	Nomascus_leucogenys
ENSODEG00000012873	PCBP3	92	85.359	ENSMEUG00000012960	PCBP3	100	85.359	Notamacropus_eugenii
ENSODEG00000012873	PCBP3	89	70.270	ENSONIG00000010370	zgc:110045	76	70.270	Oreochromis_niloticus
ENSODEG00000012873	PCBP3	86	87.410	ENSOANG00000006265	PCBP3	98	87.410	Ornithorhynchus_anatinus
ENSODEG00000012873	PCBP3	89	69.670	ENSORLG00000014385	-	72	69.670	Oryzias_latipes
ENSODEG00000012873	PCBP3	89	69.369	ENSORLG00020003139	zgc:110045	86	76.355	Oryzias_latipes_hni
ENSODEG00000012873	PCBP3	89	69.369	ENSOMEG00000015459	-	72	69.369	Oryzias_melastigma
ENSODEG00000012873	PCBP3	100	89.189	ENSOARG00000012704	PCBP3	99	89.189	Ovis_aries
ENSODEG00000012873	PCBP3	100	95.664	ENSPPAG00000021940	PCBP3	99	95.664	Pan_paniscus
ENSODEG00000012873	PCBP3	100	95.935	ENSPPRG00000003933	PCBP3	99	95.935	Panthera_pardus
ENSODEG00000012873	PCBP3	100	83.333	ENSPTIG00000012038	PCBP3	99	84.298	Panthera_tigris_altaica
ENSODEG00000012873	PCBP3	99	75.691	ENSPTRG00000014010	PCBP3	99	75.691	Pan_troglodytes
ENSODEG00000012873	PCBP3	100	95.664	ENSPANG00000023631	PCBP3	100	95.652	Papio_anubis
ENSODEG00000012873	PCBP3	73	77.720	ENSPMGG00000022531	-	92	77.720	Periophthalmus_magnuspinnatus
ENSODEG00000012873	PCBP3	89	61.538	ENSPMGG00000021588	-	72	61.538	Periophthalmus_magnuspinnatus
ENSODEG00000012873	PCBP3	100	96.477	ENSPEMG00000000587	Pcbp3	99	96.477	Peromyscus_maniculatus_bairdii
ENSODEG00000012873	PCBP3	90	69.231	ENSPFOG00000002348	zgc:110045	98	69.231	Poecilia_formosa
ENSODEG00000012873	PCBP3	71	78.283	ENSPLAG00000017488	zgc:110045	90	78.283	Poecilia_latipinna
ENSODEG00000012873	PCBP3	88	68.502	ENSPMEG00000012762	zgc:110045	91	75.243	Poecilia_mexicana
ENSODEG00000012873	PCBP3	87	70.427	ENSPREG00000001797	zgc:110045	94	73.585	Poecilia_reticulata
ENSODEG00000012873	PCBP3	80	97.992	ENSPPYG00000011525	-	92	97.992	Pongo_abelii
ENSODEG00000012873	PCBP3	88	73.714	ENSPCAG00000001454	PCBP3	100	73.714	Procavia_capensis
ENSODEG00000012873	PCBP3	100	95.664	ENSPCOG00000013797	PCBP3	99	95.664	Propithecus_coquereli
ENSODEG00000012873	PCBP3	78	86.087	ENSPVAG00000000832	PCBP3	83	86.087	Pteropus_vampyrus
ENSODEG00000012873	PCBP3	81	77.340	ENSPNYG00000004637	zgc:110045	96	77.340	Pundamilia_nyererei
ENSODEG00000012873	PCBP3	76	74.882	ENSPNAG00000004501	zgc:110045	94	74.882	Pygocentrus_nattereri
ENSODEG00000012873	PCBP3	100	95.664	ENSRROG00000034567	PCBP3	99	95.664	Rhinopithecus_roxellana
ENSODEG00000012873	PCBP3	100	95.664	ENSSBOG00000005789	PCBP3	100	95.518	Saimiri_boliviensis_boliviensis
ENSODEG00000012873	PCBP3	89	69.670	ENSSMAG00000013541	zgc:110045	91	72.685	Scophthalmus_maximus
ENSODEG00000012873	PCBP3	67	69.355	ENSSDUG00000019371	zgc:110045	66	69.355	Seriola_dumerili
ENSODEG00000012873	PCBP3	89	69.970	ENSSLDG00000021064	zgc:110045	72	69.970	Seriola_lalandi_dorsalis
ENSODEG00000012873	PCBP3	80	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSODEG00000012873	PCBP3	91	69.679	ENSSPAG00000000563	zgc:110045	99	69.679	Stegastes_partitus
ENSODEG00000012873	PCBP3	100	90.515	ENSSSCG00000023041	PCBP3	99	90.515	Sus_scrofa
ENSODEG00000012873	PCBP3	75	79.032	ENSTRUG00000017789	zgc:110045	92	79.032	Takifugu_rubripes
ENSODEG00000012873	PCBP3	71	78.035	ENSTNIG00000003546	zgc:110045	85	78.035	Tetraodon_nigroviridis
ENSODEG00000012873	PCBP3	62	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSODEG00000012873	PCBP3	100	97.784	ENSUAMG00000006491	PCBP3	99	97.784	Ursus_americanus
ENSODEG00000012873	PCBP3	100	88.219	ENSUMAG00000025403	PCBP3	99	88.219	Ursus_maritimus
ENSODEG00000012873	PCBP3	99	91.136	ENSVVUG00000023862	PCBP3	100	86.297	Vulpes_vulpes
ENSODEG00000012873	PCBP3	61	84.416	ENSXCOG00000005968	zgc:110045	82	84.416	Xiphophorus_couchianus
ENSODEG00000012873	PCBP3	87	70.122	ENSXMAG00000008030	zgc:110045	71	70.122	Xiphophorus_maculatus