EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000012975 (Gene tree)
Gene ID: 101564287
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 64984 bases
Position: chrJH651547.1:5899049-5964032
Accession: 101564287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017596	RRM_1	PF00076.22	7.6e-06	1	1
ENSODEP00000017595	RRM_1	PF00076.22	9.4e-06	1	1
ENSODEP00000017594	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017817	CNOT4-201	3214	XM_004629851	ENSODEP00000017594	710 (aa)	XP_004629908	UPI000333A84F
ENSODET00000017819	CNOT4-203	3368	XM_004629855	ENSODEP00000017596	575 (aa)	XP_004629912	UPI000333B415
ENSODET00000017818	CNOT4-202	3010	XM_004629853	ENSODEP00000017595	642 (aa)	XP_004629910	UPI000333C369

Gene Model

Click here to download ENSODEG00000012975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000012975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000012975	CNOT4	100	98.442	ENSG00000080802	CNOT4	100	98.442	Homo_sapiens
ENSODEG00000012975	CNOT4	93	90.566	ENSAPOG00000016272	cnot4a	82	90.566	Acanthochromis_polyacanthus
ENSODEG00000012975	CNOT4	97	97.246	ENSAMEG00000012081	CNOT4	99	96.078	Ailuropoda_melanoleuca
ENSODEG00000012975	CNOT4	100	60.471	ENSACIG00000003011	cnot4a	100	60.223	Amphilophus_citrinellus
ENSODEG00000012975	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSODEG00000012975	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSODEG00000012975	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSODEG00000012975	CNOT4	100	88.058	ENSAPLG00000016441	CNOT4	100	88.058	Anas_platyrhynchos
ENSODEG00000012975	CNOT4	100	87.664	ENSACAG00000011154	CNOT4	100	87.664	Anolis_carolinensis
ENSODEG00000012975	CNOT4	100	98.169	ENSANAG00000032156	CNOT4	100	98.169	Aotus_nancymaae
ENSODEG00000012975	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSODEG00000012975	CNOT4	100	73.228	ENSAMXG00000011473	cnot4b	100	73.228	Astyanax_mexicanus
ENSODEG00000012975	CNOT4	100	73.059	ENSAMXG00000001373	cnot4a	100	72.146	Astyanax_mexicanus
ENSODEG00000012975	CNOT4	100	98.435	ENSBTAG00000017919	CNOT4	100	98.435	Bos_taurus
ENSODEG00000012975	CNOT4	100	98.169	ENSCJAG00000012532	CNOT4	100	98.169	Callithrix_jacchus
ENSODEG00000012975	CNOT4	100	98.598	ENSCAFG00000003223	CNOT4	100	98.598	Canis_familiaris
ENSODEG00000012975	CNOT4	100	98.087	ENSCAFG00020000093	CNOT4	100	98.087	Canis_lupus_dingo
ENSODEG00000012975	CNOT4	100	97.913	ENSCHIG00000010955	CNOT4	100	97.913	Capra_hircus
ENSODEG00000012975	CNOT4	100	98.287	ENSTSYG00000000893	CNOT4	100	98.287	Carlito_syrichta
ENSODEG00000012975	CNOT4	100	97.042	ENSCAPG00000006213	CNOT4	100	97.042	Cavia_aperea
ENSODEG00000012975	CNOT4	100	99.577	ENSCPOG00000011526	CNOT4	100	99.577	Cavia_porcellus
ENSODEG00000012975	CNOT4	100	98.442	ENSCCAG00000024414	CNOT4	100	98.442	Cebus_capucinus
ENSODEG00000012975	CNOT4	100	98.442	ENSCATG00000022607	CNOT4	100	98.442	Cercocebus_atys
ENSODEG00000012975	CNOT4	100	99.577	ENSCLAG00000001857	CNOT4	100	99.577	Chinchilla_lanigera
ENSODEG00000012975	CNOT4	100	98.169	ENSCSAG00000009096	CNOT4	100	98.169	Chlorocebus_sabaeus
ENSODEG00000012975	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSODEG00000012975	CNOT4	100	94.811	ENSCPBG00000004959	CNOT4	100	94.811	Chrysemys_picta_bellii
ENSODEG00000012975	CNOT4	66	69.323	ENSCING00000004364	-	66	69.323	Ciona_intestinalis
ENSODEG00000012975	CNOT4	100	98.287	ENSCANG00000029319	CNOT4	100	98.287	Colobus_angolensis_palliatus
ENSODEG00000012975	CNOT4	100	98.261	ENSCGRG00001014651	Cnot4	100	98.261	Cricetulus_griseus_chok1gshd
ENSODEG00000012975	CNOT4	100	98.131	ENSCGRG00000005727	Cnot4	100	98.131	Cricetulus_griseus_crigri
ENSODEG00000012975	CNOT4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSODEG00000012975	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	91	90.566	Cyprinodon_variegatus
ENSODEG00000012975	CNOT4	100	70.635	ENSDARG00000007045	cnot4a	100	70.130	Danio_rerio
ENSODEG00000012975	CNOT4	99	93.962	ENSDARG00000007639	cnot4b	92	92.620	Danio_rerio
ENSODEG00000012975	CNOT4	100	96.774	ENSDNOG00000009409	CNOT4	100	96.774	Dasypus_novemcinctus
ENSODEG00000012975	CNOT4	100	98.609	ENSDORG00000012268	Cnot4	100	98.609	Dipodomys_ordii
ENSODEG00000012975	CNOT4	100	91.725	ENSETEG00000013407	CNOT4	89	94.196	Echinops_telfairi
ENSODEG00000012975	CNOT4	100	98.435	ENSEASG00005014430	CNOT4	100	98.435	Equus_asinus_asinus
ENSODEG00000012975	CNOT4	100	98.435	ENSECAG00000020262	CNOT4	100	98.435	Equus_caballus
ENSODEG00000012975	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSODEG00000012975	CNOT4	100	73.669	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSODEG00000012975	CNOT4	100	98.087	ENSFCAG00000011904	CNOT4	100	98.087	Felis_catus
ENSODEG00000012975	CNOT4	100	88.189	ENSFALG00000011194	CNOT4	100	88.189	Ficedula_albicollis
ENSODEG00000012975	CNOT4	100	98.609	ENSFDAG00000013525	CNOT4	100	98.609	Fukomys_damarensis
ENSODEG00000012975	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	91	89.259	Fundulus_heteroclitus
ENSODEG00000012975	CNOT4	95	59.647	ENSGMOG00000001329	cnot4a	97	60.618	Gadus_morhua
ENSODEG00000012975	CNOT4	100	94.390	ENSGALG00000011682	CNOT4	100	94.390	Gallus_gallus
ENSODEG00000012975	CNOT4	100	72.572	ENSGACG00000004276	cnot4a	91	90.189	Gasterosteus_aculeatus
ENSODEG00000012975	CNOT4	100	94.530	ENSGAGG00000017331	CNOT4	100	94.530	Gopherus_agassizii
ENSODEG00000012975	CNOT4	92	97.713	ENSGGOG00000000142	CNOT4	99	97.713	Gorilla_gorilla
ENSODEG00000012975	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSODEG00000012975	CNOT4	100	98.609	ENSHGLG00000011533	CNOT4	100	98.609	Heterocephalus_glaber_female
ENSODEG00000012975	CNOT4	100	98.609	ENSHGLG00100013058	CNOT4	100	98.609	Heterocephalus_glaber_male
ENSODEG00000012975	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSODEG00000012975	CNOT4	100	84.718	ENSIPUG00000006393	cnot4	100	72.121	Ictalurus_punctatus
ENSODEG00000012975	CNOT4	100	71.344	ENSIPUG00000016994	cnot4b	100	70.901	Ictalurus_punctatus
ENSODEG00000012975	CNOT4	100	98.169	ENSSTOG00000007717	CNOT4	100	98.169	Ictidomys_tridecemlineatus
ENSODEG00000012975	CNOT4	100	98.028	ENSJJAG00000016618	Cnot4	100	98.028	Jaculus_jaculus
ENSODEG00000012975	CNOT4	100	80.174	ENSJJAG00000019991	-	100	80.174	Jaculus_jaculus
ENSODEG00000012975	CNOT4	94	90.566	ENSKMAG00000004581	cnot4a	100	72.796	Kryptolebias_marmoratus
ENSODEG00000012975	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSODEG00000012975	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSODEG00000012975	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSODEG00000012975	CNOT4	100	96.213	ENSLAFG00000000709	CNOT4	100	96.213	Loxodonta_africana
ENSODEG00000012975	CNOT4	100	98.442	ENSMFAG00000046349	CNOT4	100	98.442	Macaca_fascicularis
ENSODEG00000012975	CNOT4	100	98.442	ENSMMUG00000016181	CNOT4	100	98.442	Macaca_mulatta
ENSODEG00000012975	CNOT4	100	97.819	ENSMNEG00000042164	CNOT4	100	97.819	Macaca_nemestrina
ENSODEG00000012975	CNOT4	100	98.442	ENSMLEG00000032709	CNOT4	100	98.442	Mandrillus_leucophaeus
ENSODEG00000012975	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSODEG00000012975	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSODEG00000012975	CNOT4	100	88.189	ENSMGAG00000011788	CNOT4	100	88.189	Meleagris_gallopavo
ENSODEG00000012975	CNOT4	100	98.261	ENSMAUG00000020415	Cnot4	100	98.261	Mesocricetus_auratus
ENSODEG00000012975	CNOT4	100	98.783	ENSMICG00000001667	CNOT4	100	98.783	Microcebus_murinus
ENSODEG00000012975	CNOT4	100	98.087	ENSMOCG00000020955	Cnot4	100	98.087	Microtus_ochrogaster
ENSODEG00000012975	CNOT4	94	75.592	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSODEG00000012975	CNOT4	100	96.056	ENSMODG00000014068	CNOT4	100	96.056	Monodelphis_domestica
ENSODEG00000012975	CNOT4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSODEG00000012975	CNOT4	100	97.920	MGP_CAROLIEiJ_G0028217	Cnot4	100	97.920	Mus_caroli
ENSODEG00000012975	CNOT4	100	98.087	ENSMUSG00000038784	Cnot4	100	98.087	Mus_musculus
ENSODEG00000012975	CNOT4	100	98.087	MGP_PahariEiJ_G0021974	Cnot4	100	98.087	Mus_pahari
ENSODEG00000012975	CNOT4	100	97.739	MGP_SPRETEiJ_G0029216	Cnot4	100	97.739	Mus_spretus
ENSODEG00000012975	CNOT4	100	98.169	ENSMPUG00000004089	CNOT4	100	98.169	Mustela_putorius_furo
ENSODEG00000012975	CNOT4	100	98.287	ENSMLUG00000008260	CNOT4	100	98.287	Myotis_lucifugus
ENSODEG00000012975	CNOT4	100	98.087	ENSNGAG00000015030	Cnot4	100	98.087	Nannospalax_galili
ENSODEG00000012975	CNOT4	100	71.278	ENSNBRG00000021144	cnot4a	100	71.128	Neolamprologus_brichardi
ENSODEG00000012975	CNOT4	100	98.131	ENSNLEG00000013352	CNOT4	100	98.131	Nomascus_leucogenys
ENSODEG00000012975	CNOT4	88	96.725	ENSOPRG00000001023	CNOT4	86	98.361	Ochotona_princeps
ENSODEG00000012975	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSODEG00000012975	CNOT4	100	95.084	ENSOANG00000005006	CNOT4	100	95.084	Ornithorhynchus_anatinus
ENSODEG00000012975	CNOT4	100	98.028	ENSOCUG00000013448	CNOT4	100	98.028	Oryctolagus_cuniculus
ENSODEG00000012975	CNOT4	100	72.672	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSODEG00000012975	CNOT4	100	72.549	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSODEG00000012975	CNOT4	100	72.977	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSODEG00000012975	CNOT4	100	72.061	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSODEG00000012975	CNOT4	100	97.756	ENSOGAG00000015499	CNOT4	100	97.756	Otolemur_garnettii
ENSODEG00000012975	CNOT4	100	97.335	ENSOARG00000008803	CNOT4	100	97.335	Ovis_aries
ENSODEG00000012975	CNOT4	100	98.131	ENSPPAG00000041937	CNOT4	100	98.131	Pan_paniscus
ENSODEG00000012975	CNOT4	100	98.783	ENSPPRG00000023940	CNOT4	100	98.783	Panthera_pardus
ENSODEG00000012975	CNOT4	100	98.087	ENSPTIG00000016601	CNOT4	100	98.087	Panthera_tigris_altaica
ENSODEG00000012975	CNOT4	100	98.287	ENSPTRG00000019727	CNOT4	100	98.287	Pan_troglodytes
ENSODEG00000012975	CNOT4	100	98.287	ENSPANG00000017724	CNOT4	100	98.287	Papio_anubis
ENSODEG00000012975	CNOT4	100	72.136	ENSPKIG00000018137	cnot4a	100	71.827	Paramormyrops_kingsleyae
ENSODEG00000012975	CNOT4	100	86.239	ENSPSIG00000011256	CNOT4	99	92.157	Pelodiscus_sinensis
ENSODEG00000012975	CNOT4	100	73.193	ENSPMGG00000005671	cnot4a	100	73.042	Periophthalmus_magnuspinnatus
ENSODEG00000012975	CNOT4	100	98.087	ENSPEMG00000021566	Cnot4	100	98.087	Peromyscus_maniculatus_bairdii
ENSODEG00000012975	CNOT4	100	95.639	ENSPCIG00000029622	CNOT4	96	95.634	Phascolarctos_cinereus
ENSODEG00000012975	CNOT4	68	82.508	ENSPFOG00000002228	cnot4a	97	57.927	Poecilia_formosa
ENSODEG00000012975	CNOT4	100	73.182	ENSPLAG00000001780	cnot4a	100	72.576	Poecilia_latipinna
ENSODEG00000012975	CNOT4	100	73.182	ENSPMEG00000006852	cnot4a	100	72.576	Poecilia_mexicana
ENSODEG00000012975	CNOT4	100	71.721	ENSPREG00000008171	cnot4a	100	70.281	Poecilia_reticulata
ENSODEG00000012975	CNOT4	100	97.887	ENSPPYG00000018026	CNOT4	100	97.887	Pongo_abelii
ENSODEG00000012975	CNOT4	100	98.598	ENSPCOG00000019907	CNOT4	100	98.598	Propithecus_coquereli
ENSODEG00000012975	CNOT4	97	95.797	ENSPVAG00000004905	CNOT4	90	95.797	Pteropus_vampyrus
ENSODEG00000012975	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSODEG00000012975	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	75.000	Pygocentrus_nattereri
ENSODEG00000012975	CNOT4	100	73.356	ENSPNAG00000020433	cnot4a	100	72.131	Pygocentrus_nattereri
ENSODEG00000012975	CNOT4	100	97.183	ENSRNOG00000010795	Cnot4	100	97.183	Rattus_norvegicus
ENSODEG00000012975	CNOT4	100	98.442	ENSRBIG00000043977	CNOT4	100	98.442	Rhinopithecus_bieti
ENSODEG00000012975	CNOT4	100	98.028	ENSSBOG00000020808	CNOT4	100	98.028	Saimiri_boliviensis_boliviensis
ENSODEG00000012975	CNOT4	100	95.915	ENSSHAG00000013639	CNOT4	100	95.915	Sarcophilus_harrisii
ENSODEG00000012975	CNOT4	100	90.074	ENSSFOG00015002019	cnot4a	100	73.529	Scleropages_formosus
ENSODEG00000012975	CNOT4	100	80.952	ENSSFOG00015017285	CNOT4	100	78.395	Scleropages_formosus
ENSODEG00000012975	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSODEG00000012975	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSODEG00000012975	CNOT4	100	71.582	ENSSDUG00000018585	cnot4b	100	71.582	Seriola_dumerili
ENSODEG00000012975	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSODEG00000012975	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	91	70.330	Seriola_lalandi_dorsalis
ENSODEG00000012975	CNOT4	100	95.171	ENSSPUG00000004677	CNOT4	100	95.171	Sphenodon_punctatus
ENSODEG00000012975	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSODEG00000012975	CNOT4	100	98.609	ENSSSCG00000021354	CNOT4	100	98.609	Sus_scrofa
ENSODEG00000012975	CNOT4	100	88.320	ENSTGUG00000009161	CNOT4	100	88.320	Taeniopygia_guttata
ENSODEG00000012975	CNOT4	100	82.508	ENSTRUG00000016861	cnot4a	92	89.259	Takifugu_rubripes
ENSODEG00000012975	CNOT4	100	70.377	ENSTNIG00000016000	cnot4a	100	69.241	Tetraodon_nigroviridis
ENSODEG00000012975	CNOT4	94	96.310	ENSTBEG00000002202	CNOT4	86	92.262	Tupaia_belangeri
ENSODEG00000012975	CNOT4	97	97.250	ENSTTRG00000005122	CNOT4	90	97.250	Tursiops_truncatus
ENSODEG00000012975	CNOT4	100	98.783	ENSUAMG00000026759	CNOT4	100	98.783	Ursus_americanus
ENSODEG00000012975	CNOT4	100	98.783	ENSUMAG00000015351	CNOT4	100	98.783	Ursus_maritimus
ENSODEG00000012975	CNOT4	100	98.783	ENSVVUG00000006200	CNOT4	100	98.783	Vulpes_vulpes
ENSODEG00000012975	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSODEG00000012975	CNOT4	94	72.049	ENSXCOG00000020824	cnot4a	98	71.363	Xiphophorus_couchianus
ENSODEG00000012975	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus