EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013025 (Gene tree)
Gene ID: 101578404
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 10324 bases
Position: chrJH651598.1:2452169-2462492
Accession: 101578404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017661	UPF0086	PF01868.16	6.1e-27	1	1
ENSODEP00000017662	UPF0086	PF01868.16	6.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017885	POP4-201	729	XM_004636818	ENSODEP00000017661	212 (aa)	-	-
ENSODET00000017886	POP4-202	678	-	ENSODEP00000017662	225 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013025	POP4	100	86.792	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSODEG00000013025	POP4	100	85.849	ENSAMEG00000018329	-	99	84.793	Ailuropoda_melanoleuca
ENSODEG00000013025	POP4	100	73.832	ENSAMEG00000003172	-	97	73.488	Ailuropoda_melanoleuca
ENSODEG00000013025	POP4	95	62.376	ENSACIG00000008358	pop4	93	64.103	Amphilophus_citrinellus
ENSODEG00000013025	POP4	92	63.959	ENSAOCG00000010116	pop4	96	62.944	Amphiprion_ocellaris
ENSODEG00000013025	POP4	97	61.058	ENSAPEG00000002829	pop4	87	60.096	Amphiprion_percula
ENSODEG00000013025	POP4	98	60.287	ENSATEG00000013028	pop4	92	60.294	Anabas_testudineus
ENSODEG00000013025	POP4	93	72.081	ENSAPLG00000014051	POP4	95	72.081	Anas_platyrhynchos
ENSODEG00000013025	POP4	100	85.849	ENSANAG00000020295	POP4	99	85.321	Aotus_nancymaae
ENSODEG00000013025	POP4	92	62.944	ENSACLG00000000526	pop4	88	62.051	Astatotilapia_calliptera
ENSODEG00000013025	POP4	99	63.158	ENSAMXG00000002899	pop4	98	61.395	Astyanax_mexicanus
ENSODEG00000013025	POP4	100	89.151	ENSBTAG00000002223	POP4	99	88.479	Bos_taurus
ENSODEG00000013025	POP4	55	31.034	WBGene00007603	C15C6.4	57	31.034	Caenorhabditis_elegans
ENSODEG00000013025	POP4	100	84.977	ENSCJAG00000046750	POP4	100	86.111	Callithrix_jacchus
ENSODEG00000013025	POP4	86	89.560	ENSCAFG00000007630	POP4	100	89.560	Canis_familiaris
ENSODEG00000013025	POP4	100	88.679	ENSCHIG00000016743	POP4	99	88.018	Capra_hircus
ENSODEG00000013025	POP4	100	87.736	ENSTSYG00000003488	POP4	99	87.558	Carlito_syrichta
ENSODEG00000013025	POP4	100	75.000	ENSCAPG00000011105	POP4	100	75.576	Cavia_aperea
ENSODEG00000013025	POP4	100	96.698	ENSCPOG00000002992	POP4	99	96.774	Cavia_porcellus
ENSODEG00000013025	POP4	100	86.321	ENSCCAG00000020285	-	98	86.111	Cebus_capucinus
ENSODEG00000013025	POP4	100	72.642	ENSCCAG00000034244	-	98	72.685	Cebus_capucinus
ENSODEG00000013025	POP4	100	88.208	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSODEG00000013025	POP4	100	98.113	ENSCLAG00000013162	POP4	99	97.696	Chinchilla_lanigera
ENSODEG00000013025	POP4	100	87.736	ENSCSAG00000004868	POP4	99	87.558	Chlorocebus_sabaeus
ENSODEG00000013025	POP4	100	65.566	ENSCHOG00000002071	POP4	100	64.977	Choloepus_hoffmanni
ENSODEG00000013025	POP4	98	71.981	ENSCPBG00000016132	POP4	99	70.046	Chrysemys_picta_bellii
ENSODEG00000013025	POP4	88	33.333	ENSCING00000023871	-	94	33.333	Ciona_intestinalis
ENSODEG00000013025	POP4	93	89.394	ENSCANG00000005924	POP4	98	89.394	Colobus_angolensis_palliatus
ENSODEG00000013025	POP4	100	85.849	ENSCGRG00001017185	Pop4	99	83.945	Cricetulus_griseus_chok1gshd
ENSODEG00000013025	POP4	100	85.849	ENSCGRG00000008155	Pop4	99	83.945	Cricetulus_griseus_crigri
ENSODEG00000013025	POP4	98	52.153	ENSCSEG00000002946	pop4	94	51.923	Cynoglossus_semilaevis
ENSODEG00000013025	POP4	95	46.078	ENSCVAG00000018602	POP4	87	45.098	Cyprinodon_variegatus
ENSODEG00000013025	POP4	92	69.072	ENSDARG00000101472	pop4	88	69.072	Danio_rerio
ENSODEG00000013025	POP4	100	88.208	ENSDNOG00000047663	POP4	87	88.018	Dasypus_novemcinctus
ENSODEG00000013025	POP4	79	84.431	ENSDORG00000008577	Pop4	100	83.721	Dipodomys_ordii
ENSODEG00000013025	POP4	87	35.714	FBgn0035831	CG8038	71	39.726	Drosophila_melanogaster
ENSODEG00000013025	POP4	100	71.226	ENSETEG00000003607	POP4	100	70.968	Echinops_telfairi
ENSODEG00000013025	POP4	95	47.196	ENSEBUG00000010447	pop4	83	47.196	Eptatretus_burgeri
ENSODEG00000013025	POP4	100	44.601	ENSEBUG00000008575	pop4	98	43.779	Eptatretus_burgeri
ENSODEG00000013025	POP4	96	41.048	ENSEBUG00000004305	pop4	98	41.048	Eptatretus_burgeri
ENSODEG00000013025	POP4	100	86.228	ENSECAG00000020206	POP4	81	84.615	Equus_caballus
ENSODEG00000013025	POP4	93	65.482	ENSEEUG00000013109	POP4	99	65.482	Erinaceus_europaeus
ENSODEG00000013025	POP4	92	65.306	ENSELUG00000019812	pop4	89	63.776	Esox_lucius
ENSODEG00000013025	POP4	100	87.264	ENSFCAG00000001619	POP4	99	87.097	Felis_catus
ENSODEG00000013025	POP4	99	68.900	ENSFALG00000000206	POP4	99	66.216	Ficedula_albicollis
ENSODEG00000013025	POP4	100	95.755	ENSFDAG00000017859	POP4	99	95.392	Fukomys_damarensis
ENSODEG00000013025	POP4	93	57.500	ENSFHEG00000012745	pop4	90	56.500	Fundulus_heteroclitus
ENSODEG00000013025	POP4	94	62.376	ENSGMOG00000000335	pop4	99	61.881	Gadus_morhua
ENSODEG00000013025	POP4	98	68.599	ENSGALG00000041972	POP4	91	66.359	Gallus_gallus
ENSODEG00000013025	POP4	76	51.515	ENSGAFG00000003571	pop4	96	50.000	Gambusia_affinis
ENSODEG00000013025	POP4	98	59.330	ENSGACG00000014510	pop4	93	66.279	Gasterosteus_aculeatus
ENSODEG00000013025	POP4	98	73.913	ENSGAGG00000024544	POP4	78	71.889	Gopherus_agassizii
ENSODEG00000013025	POP4	100	87.264	ENSGGOG00000038346	POP4	99	87.097	Gorilla_gorilla
ENSODEG00000013025	POP4	92	62.944	ENSHBUG00000021821	pop4	88	62.051	Haplochromis_burtoni
ENSODEG00000013025	POP4	100	96.698	ENSHGLG00000015798	POP4	99	96.774	Heterocephalus_glaber_female
ENSODEG00000013025	POP4	100	96.698	ENSHGLG00100009737	POP4	99	96.347	Heterocephalus_glaber_male
ENSODEG00000013025	POP4	92	62.051	ENSHCOG00000020937	pop4	88	62.051	Hippocampus_comes
ENSODEG00000013025	POP4	98	62.500	ENSIPUG00000013652	pop4	99	60.369	Ictalurus_punctatus
ENSODEG00000013025	POP4	100	90.566	ENSSTOG00000011016	POP4	99	89.862	Ictidomys_tridecemlineatus
ENSODEG00000013025	POP4	100	91.509	ENSJJAG00000013376	Pop4	99	91.244	Jaculus_jaculus
ENSODEG00000013025	POP4	98	61.722	ENSKMAG00000012250	pop4	98	59.174	Kryptolebias_marmoratus
ENSODEG00000013025	POP4	100	56.075	ENSLBEG00000014139	pop4	99	55.455	Labrus_bergylta
ENSODEG00000013025	POP4	100	56.542	ENSLBEG00000018846	-	99	55.909	Labrus_bergylta
ENSODEG00000013025	POP4	99	63.636	ENSLACG00000008581	POP4	98	62.212	Latimeria_chalumnae
ENSODEG00000013025	POP4	99	69.856	ENSLOCG00000005597	pop4	99	67.742	Lepisosteus_oculatus
ENSODEG00000013025	POP4	100	88.208	ENSLAFG00000000084	POP4	99	88.018	Loxodonta_africana
ENSODEG00000013025	POP4	100	87.736	ENSMFAG00000029606	POP4	99	87.558	Macaca_fascicularis
ENSODEG00000013025	POP4	100	86.385	ENSMMUG00000017424	POP4	99	84.862	Macaca_mulatta
ENSODEG00000013025	POP4	100	87.324	ENSMNEG00000031374	POP4	99	85.780	Macaca_nemestrina
ENSODEG00000013025	POP4	100	87.264	ENSMLEG00000043454	POP4	99	87.097	Mandrillus_leucophaeus
ENSODEG00000013025	POP4	88	65.957	ENSMAMG00000011716	pop4	93	61.972	Mastacembelus_armatus
ENSODEG00000013025	POP4	92	62.944	ENSMZEG00005002360	pop4	88	62.051	Maylandia_zebra
ENSODEG00000013025	POP4	98	68.599	ENSMGAG00000005337	POP4	100	64.732	Meleagris_gallopavo
ENSODEG00000013025	POP4	100	86.321	ENSMAUG00000020110	Pop4	99	85.780	Mesocricetus_auratus
ENSODEG00000013025	POP4	100	83.962	ENSMICG00000035730	POP4	97	83.410	Microcebus_murinus
ENSODEG00000013025	POP4	95	61.386	ENSMMOG00000015321	pop4	91	61.386	Mola_mola
ENSODEG00000013025	POP4	100	77.358	ENSMODG00000029406	POP4	94	76.852	Monodelphis_domestica
ENSODEG00000013025	POP4	99	61.429	ENSMALG00000012571	pop4	94	61.836	Monopterus_albus
ENSODEG00000013025	POP4	100	84.977	MGP_CAROLIEiJ_G0029600	Pop4	99	84.932	Mus_caroli
ENSODEG00000013025	POP4	100	85.446	ENSMUSG00000030423	Pop4	99	84.018	Mus_musculus
ENSODEG00000013025	POP4	100	85.849	MGP_SPRETEiJ_G0030699	Pop4	99	83.486	Mus_spretus
ENSODEG00000013025	POP4	100	88.679	ENSMPUG00000008041	-	99	88.479	Mustela_putorius_furo
ENSODEG00000013025	POP4	100	75.587	ENSMPUG00000008063	-	99	75.342	Mustela_putorius_furo
ENSODEG00000013025	POP4	100	68.075	ENSMLUG00000010774	POP4	99	68.349	Myotis_lucifugus
ENSODEG00000013025	POP4	59	84.000	ENSMEUG00000003636	-	100	84.000	Notamacropus_eugenii
ENSODEG00000013025	POP4	94	90.500	ENSOPRG00000004736	POP4	100	90.500	Ochotona_princeps
ENSODEG00000013025	POP4	92	61.538	ENSONIG00000003458	pop4	87	61.538	Oreochromis_niloticus
ENSODEG00000013025	POP4	100	89.623	ENSOCUG00000015974	POP4	99	89.401	Oryctolagus_cuniculus
ENSODEG00000013025	POP4	94	60.294	ENSORLG00000020317	pop4	92	59.804	Oryzias_latipes
ENSODEG00000013025	POP4	97	58.654	ENSORLG00015011624	pop4	93	58.173	Oryzias_latipes_hsok
ENSODEG00000013025	POP4	93	62.312	ENSOMEG00000002538	pop4	89	61.809	Oryzias_melastigma
ENSODEG00000013025	POP4	100	90.094	ENSOGAG00000011168	POP4	99	89.862	Otolemur_garnettii
ENSODEG00000013025	POP4	100	88.732	ENSOARG00000004041	POP4	99	88.073	Ovis_aries
ENSODEG00000013025	POP4	100	87.264	ENSPPAG00000040372	POP4	99	87.097	Pan_paniscus
ENSODEG00000013025	POP4	100	87.264	ENSPPRG00000010502	POP4	99	87.097	Panthera_pardus
ENSODEG00000013025	POP4	100	87.264	ENSPTIG00000016598	POP4	99	87.097	Panthera_tigris_altaica
ENSODEG00000013025	POP4	100	87.264	ENSPTRG00000010779	POP4	99	87.097	Pan_troglodytes
ENSODEG00000013025	POP4	100	87.736	ENSPANG00000008546	POP4	99	87.558	Papio_anubis
ENSODEG00000013025	POP4	92	69.500	ENSPKIG00000004468	pop4	87	69.192	Paramormyrops_kingsleyae
ENSODEG00000013025	POP4	98	73.913	ENSPSIG00000015690	POP4	98	75.253	Pelodiscus_sinensis
ENSODEG00000013025	POP4	93	56.650	ENSPMGG00000008608	pop4	97	56.158	Periophthalmus_magnuspinnatus
ENSODEG00000013025	POP4	100	85.377	ENSPEMG00000014034	-	95	84.862	Peromyscus_maniculatus_bairdii
ENSODEG00000013025	POP4	100	70.755	ENSPEMG00000019982	-	99	70.968	Peromyscus_maniculatus_bairdii
ENSODEG00000013025	POP4	68	68.276	ENSPMAG00000006265	pop4	73	68.276	Petromyzon_marinus
ENSODEG00000013025	POP4	100	77.358	ENSPCIG00000024738	POP4	94	76.498	Phascolarctos_cinereus
ENSODEG00000013025	POP4	95	58.373	ENSPFOG00000000925	pop4	94	57.692	Poecilia_formosa
ENSODEG00000013025	POP4	95	58.373	ENSPLAG00000003161	pop4	94	57.692	Poecilia_latipinna
ENSODEG00000013025	POP4	95	58.373	ENSPMEG00000002475	pop4	94	57.692	Poecilia_mexicana
ENSODEG00000013025	POP4	95	58.824	ENSPREG00000022403	pop4	88	57.635	Poecilia_reticulata
ENSODEG00000013025	POP4	100	87.736	ENSPPYG00000009805	POP4	99	87.558	Pongo_abelii
ENSODEG00000013025	POP4	100	79.245	ENSPCAG00000007737	POP4	100	77.727	Procavia_capensis
ENSODEG00000013025	POP4	100	88.208	ENSPCOG00000018055	POP4	99	87.558	Propithecus_coquereli
ENSODEG00000013025	POP4	100	84.434	ENSPVAG00000006069	POP4	99	83.871	Pteropus_vampyrus
ENSODEG00000013025	POP4	92	62.437	ENSPNYG00000020038	pop4	88	61.538	Pundamilia_nyererei
ENSODEG00000013025	POP4	98	63.942	ENSPNAG00000005591	pop4	99	61.751	Pygocentrus_nattereri
ENSODEG00000013025	POP4	100	84.977	ENSRNOG00000027646	Pop4	99	85.388	Rattus_norvegicus
ENSODEG00000013025	POP4	80	84.024	ENSRBIG00000044769	POP4	90	87.050	Rhinopithecus_bieti
ENSODEG00000013025	POP4	100	87.264	ENSRROG00000028903	POP4	99	87.097	Rhinopithecus_roxellana
ENSODEG00000013025	POP4	59	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSODEG00000013025	POP4	100	86.792	ENSSBOG00000032445	POP4	98	86.574	Saimiri_boliviensis_boliviensis
ENSODEG00000013025	POP4	100	75.943	ENSSHAG00000016888	POP4	99	75.115	Sarcophilus_harrisii
ENSODEG00000013025	POP4	95	67.327	ENSSFOG00015014556	pop4	90	65.842	Scleropages_formosus
ENSODEG00000013025	POP4	97	63.033	ENSSMAG00000016611	pop4	99	62.085	Scophthalmus_maximus
ENSODEG00000013025	POP4	98	60.766	ENSSDUG00000019865	pop4	84	60.096	Seriola_dumerili
ENSODEG00000013025	POP4	100	60.280	ENSSLDG00000001763	pop4	93	59.615	Seriola_lalandi_dorsalis
ENSODEG00000013025	POP4	100	86.321	ENSSARG00000004748	POP4	100	85.714	Sorex_araneus
ENSODEG00000013025	POP4	99	60.444	ENSSPAG00000014364	pop4	98	59.821	Stegastes_partitus
ENSODEG00000013025	POP4	100	88.208	ENSSSCG00000002854	POP4	99	87.558	Sus_scrofa
ENSODEG00000013025	POP4	93	71.717	ENSTGUG00000008953	POP4	99	71.717	Taeniopygia_guttata
ENSODEG00000013025	POP4	95	59.113	ENSTNIG00000006401	pop4	100	59.113	Tetraodon_nigroviridis
ENSODEG00000013025	POP4	100	87.324	ENSTBEG00000002194	POP4	99	87.615	Tupaia_belangeri
ENSODEG00000013025	POP4	100	84.434	ENSTTRG00000005882	POP4	99	84.332	Tursiops_truncatus
ENSODEG00000013025	POP4	100	86.321	ENSUAMG00000003049	-	99	85.253	Ursus_americanus
ENSODEG00000013025	POP4	100	86.321	ENSUMAG00000007522	-	99	85.253	Ursus_maritimus
ENSODEG00000013025	POP4	95	87.129	ENSVVUG00000016876	-	71	87.129	Vulpes_vulpes
ENSODEG00000013025	POP4	96	69.712	ENSXETG00000017598	pop4	98	67.593	Xenopus_tropicalis
ENSODEG00000013025	POP4	95	59.223	ENSXCOG00000017695	pop4	88	58.049	Xiphophorus_couchianus
ENSODEG00000013025	POP4	95	59.223	ENSXMAG00000013862	pop4	88	58.049	Xiphophorus_maculatus