EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013033 (Gene tree)
Gene ID: 101565668
Gene Symbol: -
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 14081 bases
Position: chrJH651519.1:34685970-34700050
Accession: 101565668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017673	RtcB	PF01139.17	5.7e-109	1	2
ENSODEP00000017673	RtcB	PF01139.17	5.7e-109	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017898	-	1134	XM_004623934	ENSODEP00000017673	377 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013033	-	99	66.038	ENSODEG00000005042	-	73	66.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013033	-	100	100.000	ENSG00000100220	RTCB	82	100.000	Homo_sapiens
ENSODEG00000013033	-	100	98.113	ENSAPOG00000006040	rtcb	82	98.113	Acanthochromis_polyacanthus
ENSODEG00000013033	-	100	100.000	ENSAMEG00000016152	RTCB	82	100.000	Ailuropoda_melanoleuca
ENSODEG00000013033	-	100	100.000	ENSACIG00000009083	rtcb	81	100.000	Amphilophus_citrinellus
ENSODEG00000013033	-	100	99.057	ENSAOCG00000005662	rtcb	87	99.057	Amphiprion_ocellaris
ENSODEG00000013033	-	100	85.390	ENSAPEG00000024653	rtcb	85	85.390	Amphiprion_percula
ENSODEG00000013033	-	100	99.057	ENSAPEG00000024701	rtcb	82	99.057	Amphiprion_percula
ENSODEG00000013033	-	100	99.057	ENSATEG00000000618	rtcb	82	99.057	Anabas_testudineus
ENSODEG00000013033	-	100	98.113	ENSACAG00000014817	RTCB	80	98.113	Anolis_carolinensis
ENSODEG00000013033	-	100	65.920	ENSANAG00000023724	-	92	66.832	Aotus_nancymaae
ENSODEG00000013033	-	100	79.870	ENSANAG00000018191	-	80	79.870	Aotus_nancymaae
ENSODEG00000013033	-	100	98.113	ENSACLG00000008367	rtcb	87	98.113	Astatotilapia_calliptera
ENSODEG00000013033	-	100	88.618	ENSAMXG00000042320	rtcb	85	88.618	Astyanax_mexicanus
ENSODEG00000013033	-	100	100.000	ENSBTAG00000011070	RTCB	82	100.000	Bos_taurus
ENSODEG00000013033	-	100	76.015	WBGene00008877	rtcb-1	77	76.015	Caenorhabditis_elegans
ENSODEG00000013033	-	100	100.000	ENSCJAG00000006128	RTCB	82	100.000	Callithrix_jacchus
ENSODEG00000013033	-	100	91.509	ENSCAFG00000010789	-	82	91.509	Canis_familiaris
ENSODEG00000013033	-	100	100.000	ENSCAFG00000001785	RTCB	82	100.000	Canis_familiaris
ENSODEG00000013033	-	100	100.000	ENSCAFG00020004890	-	82	100.000	Canis_lupus_dingo
ENSODEG00000013033	-	83	87.805	ENSCAFG00020018953	-	79	87.805	Canis_lupus_dingo
ENSODEG00000013033	-	100	100.000	ENSCHIG00000027009	-	82	100.000	Capra_hircus
ENSODEG00000013033	-	100	100.000	ENSTSYG00000012320	RTCB	82	100.000	Carlito_syrichta
ENSODEG00000013033	-	100	100.000	ENSCAPG00000011647	RTCB	83	100.000	Cavia_aperea
ENSODEG00000013033	-	100	100.000	ENSCCAG00000000618	RTCB	82	100.000	Cebus_capucinus
ENSODEG00000013033	-	100	100.000	ENSCATG00000033424	RTCB	82	100.000	Cercocebus_atys
ENSODEG00000013033	-	100	100.000	ENSCLAG00000007997	RTCB	82	100.000	Chinchilla_lanigera
ENSODEG00000013033	-	100	100.000	ENSCSAG00000008351	RTCB	82	100.000	Chlorocebus_sabaeus
ENSODEG00000013033	-	100	100.000	ENSCHOG00000009123	RTCB	82	100.000	Choloepus_hoffmanni
ENSODEG00000013033	-	100	99.057	ENSCPBG00000023184	RTCB	82	99.057	Chrysemys_picta_bellii
ENSODEG00000013033	-	100	86.792	ENSCING00000003830	-	77	86.792	Ciona_intestinalis
ENSODEG00000013033	-	100	86.792	ENSCSAVG00000008124	-	74	86.792	Ciona_savignyi
ENSODEG00000013033	-	100	88.961	ENSCANG00000001891	RTCB	81	88.961	Colobus_angolensis_palliatus
ENSODEG00000013033	-	100	99.057	ENSCGRG00001011173	Rtcb	82	99.057	Cricetulus_griseus_chok1gshd
ENSODEG00000013033	-	99	100.000	ENSCGRG00000009587	-	84	100.000	Cricetulus_griseus_crigri
ENSODEG00000013033	-	100	99.057	ENSCSEG00000003986	rtcb	82	99.057	Cynoglossus_semilaevis
ENSODEG00000013033	-	83	93.421	ENSCVAG00000000569	rtcb	80	93.421	Cyprinodon_variegatus
ENSODEG00000013033	-	100	100.000	ENSDARG00000101047	rtcb	82	100.000	Danio_rerio
ENSODEG00000013033	-	79	89.935	ENSDNOG00000012425	RTCB	75	89.935	Dasypus_novemcinctus
ENSODEG00000013033	-	100	100.000	ENSDORG00000010855	Rtcb	82	100.000	Dipodomys_ordii
ENSODEG00000013033	-	100	87.736	FBgn0032781	RtcB	75	87.736	Drosophila_melanogaster
ENSODEG00000013033	-	100	100.000	ENSETEG00000001988	RTCB	82	100.000	Echinops_telfairi
ENSODEG00000013033	-	100	90.037	ENSEBUG00000014235	rtcb	82	90.037	Eptatretus_burgeri
ENSODEG00000013033	-	100	100.000	ENSEASG00005019059	RTCB	82	100.000	Equus_asinus_asinus
ENSODEG00000013033	-	100	100.000	ENSECAG00000023998	RTCB	82	100.000	Equus_caballus
ENSODEG00000013033	-	93	87.544	ENSEEUG00000006251	RTCB	89	87.544	Erinaceus_europaeus
ENSODEG00000013033	-	100	98.113	ENSELUG00000009275	rtcb	74	98.113	Esox_lucius
ENSODEG00000013033	-	100	100.000	ENSFCAG00000026480	RTCB	82	100.000	Felis_catus
ENSODEG00000013033	-	100	99.057	ENSFALG00000013334	RTCB	82	99.057	Ficedula_albicollis
ENSODEG00000013033	-	100	100.000	ENSFDAG00000018150	RTCB	82	100.000	Fukomys_damarensis
ENSODEG00000013033	-	100	100.000	ENSFHEG00000009595	rtcb	82	100.000	Fundulus_heteroclitus
ENSODEG00000013033	-	100	85.366	ENSGMOG00000018882	rtcb	85	85.366	Gadus_morhua
ENSODEG00000013033	-	100	99.057	ENSGALG00000012611	RTCB	82	99.057	Gallus_gallus
ENSODEG00000013033	-	100	99.057	ENSGAFG00000004198	rtcb	82	99.057	Gambusia_affinis
ENSODEG00000013033	-	100	98.113	ENSGACG00000000586	rtcb	82	98.113	Gasterosteus_aculeatus
ENSODEG00000013033	-	91	100.000	ENSGAGG00000019133	RTCB	79	100.000	Gopherus_agassizii
ENSODEG00000013033	-	100	100.000	ENSGGOG00000011402	RTCB	82	100.000	Gorilla_gorilla
ENSODEG00000013033	-	100	98.113	ENSHBUG00000020571	rtcb	82	98.113	Haplochromis_burtoni
ENSODEG00000013033	-	99	62.413	ENSHGLG00000001066	-	99	62.413	Heterocephalus_glaber_female
ENSODEG00000013033	-	100	100.000	ENSHGLG00000004492	RTCB	82	100.000	Heterocephalus_glaber_female
ENSODEG00000013033	-	100	100.000	ENSHGLG00100008965	RTCB	82	100.000	Heterocephalus_glaber_male
ENSODEG00000013033	-	100	90.741	ENSHCOG00000006450	rtcb	82	90.741	Hippocampus_comes
ENSODEG00000013033	-	100	88.618	ENSIPUG00000015443	rtcb	85	88.618	Ictalurus_punctatus
ENSODEG00000013033	-	100	100.000	ENSSTOG00000003878	RTCB	82	100.000	Ictidomys_tridecemlineatus
ENSODEG00000013033	-	100	99.057	ENSJJAG00000010667	Rtcb	82	99.057	Jaculus_jaculus
ENSODEG00000013033	-	100	100.000	ENSKMAG00000013178	rtcb	82	100.000	Kryptolebias_marmoratus
ENSODEG00000013033	-	100	99.057	ENSLBEG00000010566	RTCB	82	99.057	Labrus_bergylta
ENSODEG00000013033	-	100	99.057	ENSLBEG00000000214	rtcb	75	99.057	Labrus_bergylta
ENSODEG00000013033	-	100	98.113	ENSLACG00000013033	RTCB	82	98.113	Latimeria_chalumnae
ENSODEG00000013033	-	100	87.805	ENSLOCG00000016515	rtcb	84	87.805	Lepisosteus_oculatus
ENSODEG00000013033	-	100	99.057	ENSLAFG00000002082	RTCB	82	99.057	Loxodonta_africana
ENSODEG00000013033	-	100	100.000	ENSMFAG00000034419	RTCB	82	100.000	Macaca_fascicularis
ENSODEG00000013033	-	100	100.000	ENSMMUG00000006720	RTCB	82	100.000	Macaca_mulatta
ENSODEG00000013033	-	100	100.000	ENSMNEG00000040669	RTCB	82	100.000	Macaca_nemestrina
ENSODEG00000013033	-	100	100.000	ENSMLEG00000040505	RTCB	82	100.000	Mandrillus_leucophaeus
ENSODEG00000013033	-	100	99.057	ENSMAMG00000020676	rtcb	82	99.057	Mastacembelus_armatus
ENSODEG00000013033	-	100	98.113	ENSMZEG00005018942	rtcb	82	98.113	Maylandia_zebra
ENSODEG00000013033	-	100	99.057	ENSMGAG00000012805	RTCB	82	99.057	Meleagris_gallopavo
ENSODEG00000013033	-	78	100.000	ENSMAUG00000008301	Rtcb	98	100.000	Mesocricetus_auratus
ENSODEG00000013033	-	100	91.509	ENSMICG00000036677	-	81	91.509	Microcebus_murinus
ENSODEG00000013033	-	100	100.000	ENSMICG00000013303	-	82	100.000	Microcebus_murinus
ENSODEG00000013033	-	100	100.000	ENSMOCG00000002440	Rtcb	82	100.000	Microtus_ochrogaster
ENSODEG00000013033	-	100	99.057	ENSMMOG00000005987	rtcb	82	99.057	Mola_mola
ENSODEG00000013033	-	100	100.000	ENSMODG00000001414	RTCB	82	100.000	Monodelphis_domestica
ENSODEG00000013033	-	100	99.057	ENSMALG00000007603	rtcb	82	99.057	Monopterus_albus
ENSODEG00000013033	-	100	100.000	MGP_CAROLIEiJ_G0015689	Rtcb	82	100.000	Mus_caroli
ENSODEG00000013033	-	100	100.000	ENSMUSG00000001783	Rtcb	82	100.000	Mus_musculus
ENSODEG00000013033	-	100	100.000	MGP_PahariEiJ_G0031396	Rtcb	82	100.000	Mus_pahari
ENSODEG00000013033	-	100	100.000	MGP_SPRETEiJ_G0016507	Rtcb	82	100.000	Mus_spretus
ENSODEG00000013033	-	100	100.000	ENSMPUG00000012285	RTCB	82	100.000	Mustela_putorius_furo
ENSODEG00000013033	-	100	96.226	ENSMLUG00000007803	RTCB	82	96.226	Myotis_lucifugus
ENSODEG00000013033	-	100	79.576	ENSNGAG00000005093	Rtcb	91	79.576	Nannospalax_galili
ENSODEG00000013033	-	100	99.057	ENSNBRG00000017202	rtcb	82	99.057	Neolamprologus_brichardi
ENSODEG00000013033	-	100	100.000	ENSNLEG00000004960	RTCB	82	100.000	Nomascus_leucogenys
ENSODEG00000013033	-	100	100.000	ENSMEUG00000007809	-	75	100.000	Notamacropus_eugenii
ENSODEG00000013033	-	82	100.000	ENSOPRG00000003488	RTCB	67	100.000	Ochotona_princeps
ENSODEG00000013033	-	100	99.057	ENSONIG00000007474	rtcb	82	99.057	Oreochromis_niloticus
ENSODEG00000013033	-	100	100.000	ENSOANG00000005524	RTCB	82	100.000	Ornithorhynchus_anatinus
ENSODEG00000013033	-	91	100.000	ENSOCUG00000008270	RTCB	77	100.000	Oryctolagus_cuniculus
ENSODEG00000013033	-	100	99.057	ENSORLG00000020093	rtcb	82	99.057	Oryzias_latipes
ENSODEG00000013033	-	100	98.113	ENSORLG00020003706	rtcb	87	98.113	Oryzias_latipes_hni
ENSODEG00000013033	-	100	99.057	ENSORLG00015002968	rtcb	82	99.057	Oryzias_latipes_hsok
ENSODEG00000013033	-	100	99.057	ENSOMEG00000021278	rtcb	82	99.057	Oryzias_melastigma
ENSODEG00000013033	-	100	98.113	ENSOGAG00000001425	RTCB	82	98.113	Otolemur_garnettii
ENSODEG00000013033	-	100	100.000	ENSOARG00000018008	RTCB	82	100.000	Ovis_aries
ENSODEG00000013033	-	100	100.000	ENSPPAG00000028667	RTCB	82	100.000	Pan_paniscus
ENSODEG00000013033	-	100	100.000	ENSPPRG00000004038	RTCB	82	100.000	Panthera_pardus
ENSODEG00000013033	-	100	98.893	ENSPTIG00000020499	RTCB	82	98.893	Panthera_tigris_altaica
ENSODEG00000013033	-	100	100.000	ENSPTRG00000014287	RTCB	82	100.000	Pan_troglodytes
ENSODEG00000013033	-	100	100.000	ENSPANG00000016035	RTCB	82	100.000	Papio_anubis
ENSODEG00000013033	-	100	98.113	ENSPKIG00000001881	rtcb	82	98.113	Paramormyrops_kingsleyae
ENSODEG00000013033	-	96	99.057	ENSPSIG00000011690	RTCB	87	99.057	Pelodiscus_sinensis
ENSODEG00000013033	-	100	100.000	ENSPMGG00000016672	rtcb	82	100.000	Periophthalmus_magnuspinnatus
ENSODEG00000013033	-	100	100.000	ENSPEMG00000019548	Rtcb	82	100.000	Peromyscus_maniculatus_bairdii
ENSODEG00000013033	-	100	91.882	ENSPMAG00000005657	rtcb	77	91.882	Petromyzon_marinus
ENSODEG00000013033	-	100	100.000	ENSPCIG00000009467	RTCB	82	100.000	Phascolarctos_cinereus
ENSODEG00000013033	-	100	100.000	ENSPFOG00000003058	rtcb	82	100.000	Poecilia_formosa
ENSODEG00000013033	-	100	100.000	ENSPLAG00000017663	rtcb	82	100.000	Poecilia_latipinna
ENSODEG00000013033	-	100	100.000	ENSPMEG00000006227	rtcb	82	100.000	Poecilia_mexicana
ENSODEG00000013033	-	100	100.000	ENSPREG00000018467	rtcb	82	100.000	Poecilia_reticulata
ENSODEG00000013033	-	100	100.000	ENSPPYG00000011752	RTCB	82	100.000	Pongo_abelii
ENSODEG00000013033	-	91	100.000	ENSPCAG00000013641	RTCB	73	100.000	Procavia_capensis
ENSODEG00000013033	-	100	100.000	ENSPCOG00000017243	RTCB	82	100.000	Propithecus_coquereli
ENSODEG00000013033	-	91	100.000	ENSPVAG00000002380	RTCB	81	100.000	Pteropus_vampyrus
ENSODEG00000013033	-	100	98.113	ENSPNYG00000022760	rtcb	82	98.113	Pundamilia_nyererei
ENSODEG00000013033	-	92	100.000	ENSPNAG00000009209	rtcb	77	100.000	Pygocentrus_nattereri
ENSODEG00000013033	-	100	100.000	ENSRNOG00000004813	Rtcb	82	100.000	Rattus_norvegicus
ENSODEG00000013033	-	100	99.057	ENSRBIG00000042090	RTCB	81	99.057	Rhinopithecus_bieti
ENSODEG00000013033	-	100	93.396	ENSSBOG00000020085	-	82	93.396	Saimiri_boliviensis_boliviensis
ENSODEG00000013033	-	100	100.000	ENSSHAG00000016277	RTCB	87	100.000	Sarcophilus_harrisii
ENSODEG00000013033	-	100	98.113	ENSSFOG00015000763	rtcb	82	98.113	Scleropages_formosus
ENSODEG00000013033	-	100	100.000	ENSSFOG00015011572	RTCB	82	100.000	Scleropages_formosus
ENSODEG00000013033	-	100	99.057	ENSSMAG00000005096	rtcb	83	99.057	Scophthalmus_maximus
ENSODEG00000013033	-	100	99.057	ENSSDUG00000012605	rtcb	82	99.057	Seriola_dumerili
ENSODEG00000013033	-	100	99.057	ENSSLDG00000019458	rtcb	82	99.057	Seriola_lalandi_dorsalis
ENSODEG00000013033	-	81	100.000	ENSSARG00000004799	-	65	100.000	Sorex_araneus
ENSODEG00000013033	-	100	98.113	ENSSPUG00000012814	RTCB	82	98.113	Sphenodon_punctatus
ENSODEG00000013033	-	100	99.057	ENSSPAG00000004623	rtcb	82	99.057	Stegastes_partitus
ENSODEG00000013033	-	100	100.000	ENSSSCG00000000158	RTCB	82	100.000	Sus_scrofa
ENSODEG00000013033	-	100	99.057	ENSTGUG00000010947	RTCB	82	99.057	Taeniopygia_guttata
ENSODEG00000013033	-	96	99.057	ENSTRUG00000009880	rtcb	87	99.057	Takifugu_rubripes
ENSODEG00000013033	-	100	96.226	ENSTNIG00000002484	rtcb	82	96.226	Tetraodon_nigroviridis
ENSODEG00000013033	-	92	100.000	ENSTBEG00000004418	RTCB	70	100.000	Tupaia_belangeri
ENSODEG00000013033	-	91	100.000	ENSTTRG00000006417	RTCB	81	100.000	Tursiops_truncatus
ENSODEG00000013033	-	100	100.000	ENSUAMG00000022792	RTCB	82	100.000	Ursus_americanus
ENSODEG00000013033	-	100	100.000	ENSUMAG00000017225	RTCB	82	100.000	Ursus_maritimus
ENSODEG00000013033	-	100	99.057	ENSVPAG00000005375	RTCB	82	99.057	Vicugna_pacos
ENSODEG00000013033	-	100	100.000	ENSVVUG00000023408	RTCB	85	100.000	Vulpes_vulpes
ENSODEG00000013033	-	100	98.113	ENSXETG00000011523	rtcb	82	98.113	Xenopus_tropicalis
ENSODEG00000013033	-	100	99.057	ENSXMAG00000002855	rtcb	82	99.057	Xiphophorus_maculatus