EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013099 (Gene tree)
Gene ID: 101561060
Gene Symbol: -
Alias: -
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 23027 bases
Position: chrJH651526.1:6379080-6402106
Accession: 101561060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017759	tRNA_anti-codon	PF01336.25	7.3e-15	1	1
ENSODEP00000017762	tRNA_anti-codon	PF01336.25	7.5e-15	1	1
ENSODEP00000017760	tRNA_anti-codon	PF01336.25	7.6e-15	1	1
ENSODEP00000017761	tRNA_anti-codon	PF01336.25	8.4e-15	1	1
ENSODEP00000017758	tRNA_anti-codon	PF01336.25	9e-15	1	1
ENSODEP00000017762	tRNA-synt_2	PF00152.20	9.9e-81	1	1
ENSODEP00000017760	tRNA-synt_2	PF00152.20	1e-80	1	1
ENSODEP00000017759	tRNA-synt_2	PF00152.20	1e-80	1	1
ENSODEP00000017761	tRNA-synt_2	PF00152.20	1.1e-80	1	1
ENSODEP00000017758	tRNA-synt_2	PF00152.20	1.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000017988	-	1737	-	ENSODEP00000017762	578 (aa)	-	-
ENSODET00000017985	-	1953	XM_004625775	ENSODEP00000017759	596 (aa)	XP_004625832	UPI0003340868
ENSODET00000017984	-	2133	XM_004625774	ENSODEP00000017758	624 (aa)	XP_004625831	UPI00033410CB
ENSODET00000017987	-	1821	-	ENSODEP00000017761	606 (aa)	-	-
ENSODET00000017986	-	1749	-	ENSODEP00000017760	582 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013099	-	99	69.723	ENSODEG00000009464	-	100	69.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013099	-	100	93.132	ENSG00000065427	KARS	100	97.059	Homo_sapiens
ENSODEG00000013099	-	99	79.376	ENSAPOG00000010997	kars	99	78.644	Acanthochromis_polyacanthus
ENSODEG00000013099	-	100	91.680	ENSAMEG00000005347	KARS	100	91.680	Ailuropoda_melanoleuca
ENSODEG00000013099	-	98	75.485	ENSACIG00000000304	kars	99	75.601	Amphilophus_citrinellus
ENSODEG00000013099	-	97	81.900	ENSAOCG00000012971	kars	97	80.995	Amphiprion_ocellaris
ENSODEG00000013099	-	97	81.720	ENSAPEG00000011144	kars	98	81.326	Amphiprion_percula
ENSODEG00000013099	-	98	79.718	ENSATEG00000004954	kars	99	79.518	Anabas_testudineus
ENSODEG00000013099	-	93	86.220	ENSAPLG00000012705	KARS	98	85.348	Anas_platyrhynchos
ENSODEG00000013099	-	99	82.024	ENSACAG00000007577	KARS	92	80.750	Anolis_carolinensis
ENSODEG00000013099	-	99	78.141	ENSANAG00000031739	-	99	77.181	Aotus_nancymaae
ENSODEG00000013099	-	100	93.467	ENSANAG00000030403	-	100	93.467	Aotus_nancymaae
ENSODEG00000013099	-	98	80.247	ENSACLG00000001613	kars	97	80.243	Astatotilapia_calliptera
ENSODEG00000013099	-	97	82.079	ENSAMXG00000030719	kars	98	81.643	Astyanax_mexicanus
ENSODEG00000013099	-	100	91.457	ENSBTAG00000015677	KARS	77	91.457	Bos_taurus
ENSODEG00000013099	-	99	58.711	WBGene00002238	kars-1	100	62.524	Caenorhabditis_elegans
ENSODEG00000013099	-	100	93.635	ENSCJAG00000014213	KARS	100	93.635	Callithrix_jacchus
ENSODEG00000013099	-	100	91.840	ENSCAFG00000020069	KARS	100	91.840	Canis_familiaris
ENSODEG00000013099	-	100	92.127	ENSCAFG00020001721	KARS	100	92.127	Canis_lupus_dingo
ENSODEG00000013099	-	100	91.792	ENSCHIG00000014108	-	100	91.792	Capra_hircus
ENSODEG00000013099	-	99	90.435	ENSCHIG00000016073	-	97	89.691	Capra_hircus
ENSODEG00000013099	-	100	92.000	ENSTSYG00000001643	KARS	100	92.000	Carlito_syrichta
ENSODEG00000013099	-	100	88.622	ENSCAPG00000016234	KARS	100	88.622	Cavia_aperea
ENSODEG00000013099	-	100	94.631	ENSCPOG00000012036	KARS	100	94.631	Cavia_porcellus
ENSODEG00000013099	-	100	93.970	ENSCCAG00000034307	-	100	93.970	Cebus_capucinus
ENSODEG00000013099	-	92	77.213	ENSCCAG00000030337	-	100	76.147	Cebus_capucinus
ENSODEG00000013099	-	99	92.708	ENSCATG00000038129	KARS	99	92.137	Cercocebus_atys
ENSODEG00000013099	-	100	95.192	ENSCLAG00000007905	KARS	100	95.192	Chinchilla_lanigera
ENSODEG00000013099	-	100	91.360	ENSCSAG00000003664	KARS	100	91.360	Chlorocebus_sabaeus
ENSODEG00000013099	-	82	94.433	ENSCHOG00000013447	KARS	82	94.433	Choloepus_hoffmanni
ENSODEG00000013099	-	91	72.814	ENSCPBG00000002553	-	95	72.814	Chrysemys_picta_bellii
ENSODEG00000013099	-	99	85.490	ENSCPBG00000026969	KARS	100	84.034	Chrysemys_picta_bellii
ENSODEG00000013099	-	95	67.908	ENSCING00000009513	-	97	68.440	Ciona_intestinalis
ENSODEG00000013099	-	55	70.533	ENSCSAVG00000001136	-	96	74.400	Ciona_savignyi
ENSODEG00000013099	-	96	67.776	ENSCSAVG00000007684	-	100	65.625	Ciona_savignyi
ENSODEG00000013099	-	100	87.940	ENSCANG00000032813	KARS	100	87.940	Colobus_angolensis_palliatus
ENSODEG00000013099	-	100	92.332	ENSCGRG00001004055	KARS	100	92.332	Cricetulus_griseus_chok1gshd
ENSODEG00000013099	-	100	92.332	ENSCGRG00000014242	KARS	100	92.332	Cricetulus_griseus_crigri
ENSODEG00000013099	-	97	82.258	ENSCSEG00000008324	kars	98	81.993	Cynoglossus_semilaevis
ENSODEG00000013099	-	97	80.357	ENSCVAG00000019686	kars	99	80.314	Cyprinodon_variegatus
ENSODEG00000013099	-	99	80.274	ENSDARG00000103799	kars	99	84.321	Danio_rerio
ENSODEG00000013099	-	100	92.640	ENSDNOG00000002241	KARS	100	92.640	Dasypus_novemcinctus
ENSODEG00000013099	-	100	71.477	ENSDORG00000024214	-	100	71.477	Dipodomys_ordii
ENSODEG00000013099	-	100	93.590	ENSDORG00000004780	-	100	93.590	Dipodomys_ordii
ENSODEG00000013099	-	97	68.858	FBgn0027084	LysRS	99	69.204	Drosophila_melanogaster
ENSODEG00000013099	-	100	90.256	ENSETEG00000008353	KARS	100	90.256	Echinops_telfairi
ENSODEG00000013099	-	98	71.404	ENSEBUG00000001284	-	97	71.181	Eptatretus_burgeri
ENSODEG00000013099	-	100	93.322	ENSEASG00005013497	KARS	100	93.322	Equus_asinus_asinus
ENSODEG00000013099	-	100	93.322	ENSECAG00000013424	KARS	100	93.322	Equus_caballus
ENSODEG00000013099	-	97	84.107	ENSEEUG00000007042	KARS	100	82.880	Erinaceus_europaeus
ENSODEG00000013099	-	98	73.205	ENSELUG00000014575	kars	97	73.555	Esox_lucius
ENSODEG00000013099	-	98	93.997	ENSFCAG00000008573	KARS	100	93.467	Felis_catus
ENSODEG00000013099	-	99	83.592	ENSFALG00000002543	KARS	100	82.196	Ficedula_albicollis
ENSODEG00000013099	-	100	94.631	ENSFDAG00000007155	KARS	100	94.631	Fukomys_damarensis
ENSODEG00000013099	-	97	78.836	ENSFHEG00000006172	kars	99	78.448	Fundulus_heteroclitus
ENSODEG00000013099	-	97	79.715	ENSGMOG00000002633	kars	98	76.112	Gadus_morhua
ENSODEG00000013099	-	99	85.243	ENSGALG00000000907	KARS	100	84.801	Gallus_gallus
ENSODEG00000013099	-	98	79.682	ENSGAFG00000017252	kars	99	79.655	Gambusia_affinis
ENSODEG00000013099	-	97	80.605	ENSGACG00000015749	kars	95	80.488	Gasterosteus_aculeatus
ENSODEG00000013099	-	99	85.490	ENSGAGG00000023836	KARS	99	83.838	Gopherus_agassizii
ENSODEG00000013099	-	91	72.624	ENSGAGG00000011960	-	95	74.455	Gopherus_agassizii
ENSODEG00000013099	-	100	92.797	ENSGGOG00000005515	KARS	100	92.797	Gorilla_gorilla
ENSODEG00000013099	-	98	80.247	ENSHBUG00000013619	kars	97	80.243	Haplochromis_burtoni
ENSODEG00000013099	-	100	94.128	ENSHGLG00000011898	KARS	100	94.454	Heterocephalus_glaber_female
ENSODEG00000013099	-	100	85.067	ENSHGLG00000015235	-	100	85.067	Heterocephalus_glaber_female
ENSODEG00000013099	-	99	77.663	ENSHGLG00000001298	-	99	77.371	Heterocephalus_glaber_female
ENSODEG00000013099	-	100	84.899	ENSHGLG00100012523	-	100	84.899	Heterocephalus_glaber_male
ENSODEG00000013099	-	99	77.491	ENSHGLG00100006466	-	99	77.205	Heterocephalus_glaber_male
ENSODEG00000013099	-	100	94.128	ENSHGLG00100012264	KARS	100	94.128	Heterocephalus_glaber_male
ENSODEG00000013099	-	99	79.340	ENSHCOG00000002900	kars	97	78.114	Hippocampus_comes
ENSODEG00000013099	-	99	80.069	ENSIPUG00000009862	kars	99	80.000	Ictalurus_punctatus
ENSODEG00000013099	-	100	94.128	ENSSTOG00000004205	KARS	100	94.128	Ictidomys_tridecemlineatus
ENSODEG00000013099	-	100	92.617	ENSJJAG00000020406	Kars	100	92.617	Jaculus_jaculus
ENSODEG00000013099	-	98	80.565	ENSKMAG00000006434	kars	99	80.656	Kryptolebias_marmoratus
ENSODEG00000013099	-	99	79.931	ENSLBEG00000026537	kars	96	79.526	Labrus_bergylta
ENSODEG00000013099	-	88	75.296	ENSLACG00000016399	-	99	75.296	Latimeria_chalumnae
ENSODEG00000013099	-	100	79.140	ENSLACG00000006667	KARS	100	79.777	Latimeria_chalumnae
ENSODEG00000013099	-	97	82.796	ENSLOCG00000004002	kars	97	82.456	Lepisosteus_oculatus
ENSODEG00000013099	-	91	71.293	ENSLOCG00000013608	-	95	71.293	Lepisosteus_oculatus
ENSODEG00000013099	-	100	92.000	ENSLAFG00000015340	KARS	100	92.000	Loxodonta_africana
ENSODEG00000013099	-	100	91.960	ENSMFAG00000040024	KARS	100	91.960	Macaca_fascicularis
ENSODEG00000013099	-	100	91.960	ENSMNEG00000042879	-	100	91.960	Macaca_nemestrina
ENSODEG00000013099	-	86	90.485	ENSMNEG00000035832	-	99	90.485	Macaca_nemestrina
ENSODEG00000013099	-	100	92.127	ENSMLEG00000034947	KARS	100	92.127	Mandrillus_leucophaeus
ENSODEG00000013099	-	98	80.565	ENSMAMG00000021559	kars	99	76.672	Mastacembelus_armatus
ENSODEG00000013099	-	98	80.247	ENSMZEG00005014382	kars	97	80.243	Maylandia_zebra
ENSODEG00000013099	-	99	81.990	ENSMGAG00000009000	KARS	100	84.779	Meleagris_gallopavo
ENSODEG00000013099	-	100	92.640	ENSMICG00000011997	KARS	100	92.640	Microcebus_murinus
ENSODEG00000013099	-	100	89.765	ENSMOCG00000019029	-	100	89.765	Microtus_ochrogaster
ENSODEG00000013099	-	99	94.046	ENSMOCG00000011829	Kars	99	93.232	Microtus_ochrogaster
ENSODEG00000013099	-	98	80.742	ENSMMOG00000016934	kars	99	80.742	Mola_mola
ENSODEG00000013099	-	99	88.287	ENSMODG00000002215	-	99	88.307	Monodelphis_domestica
ENSODEG00000013099	-	99	82.087	ENSMODG00000002238	-	99	80.578	Monodelphis_domestica
ENSODEG00000013099	-	97	80.645	ENSMALG00000020858	kars	98	80.245	Monopterus_albus
ENSODEG00000013099	-	86	88.402	MGP_CAROLIEiJ_G0031588	Kars	100	88.402	Mus_caroli
ENSODEG00000013099	-	100	91.946	ENSMUSG00000031948	Kars	100	91.946	Mus_musculus
ENSODEG00000013099	-	100	91.275	MGP_PahariEiJ_G0023186	Kars	100	91.275	Mus_pahari
ENSODEG00000013099	-	100	91.946	MGP_SPRETEiJ_G0032706	Kars	100	91.946	Mus_spretus
ENSODEG00000013099	-	100	92.000	ENSMPUG00000009871	KARS	100	92.000	Mustela_putorius_furo
ENSODEG00000013099	-	81	57.853	ENSMLUG00000026871	-	98	56.743	Myotis_lucifugus
ENSODEG00000013099	-	100	91.520	ENSMLUG00000015119	-	100	91.520	Myotis_lucifugus
ENSODEG00000013099	-	100	92.114	ENSNGAG00000018820	-	100	92.114	Nannospalax_galili
ENSODEG00000013099	-	95	91.667	ENSNGAG00000022944	-	96	91.667	Nannospalax_galili
ENSODEG00000013099	-	97	80.071	ENSNBRG00000011098	kars	97	80.069	Neolamprologus_brichardi
ENSODEG00000013099	-	100	92.797	ENSNLEG00000013072	KARS	100	92.797	Nomascus_leucogenys
ENSODEG00000013099	-	99	84.348	ENSMEUG00000008684	KARS	99	82.334	Notamacropus_eugenii
ENSODEG00000013099	-	99	93.241	ENSOPRG00000012544	KARS	100	92.320	Ochotona_princeps
ENSODEG00000013099	-	98	80.247	ENSONIG00000005937	kars	98	80.416	Oreochromis_niloticus
ENSODEG00000013099	-	99	89.775	ENSOANG00000008179	KARS	99	87.838	Ornithorhynchus_anatinus
ENSODEG00000013099	-	100	85.906	ENSOCUG00000015553	KARS	100	86.409	Oryctolagus_cuniculus
ENSODEG00000013099	-	97	81.495	ENSORLG00000007627	kars	99	77.924	Oryzias_latipes
ENSODEG00000013099	-	95	80.919	ENSORLG00020010056	kars	99	77.759	Oryzias_latipes_hni
ENSODEG00000013099	-	97	81.317	ENSORLG00015008179	kars	99	77.759	Oryzias_latipes_hsok
ENSODEG00000013099	-	97	81.139	ENSOMEG00000001710	kars	98	80.870	Oryzias_melastigma
ENSODEG00000013099	-	100	87.200	ENSOGAG00000005903	KARS	100	87.200	Otolemur_garnettii
ENSODEG00000013099	-	92	91.818	ENSOARG00000006928	KARS	96	91.818	Ovis_aries
ENSODEG00000013099	-	100	92.797	ENSPPAG00000036192	KARS	100	92.797	Pan_paniscus
ENSODEG00000013099	-	100	93.132	ENSPPRG00000003027	KARS	100	93.132	Panthera_pardus
ENSODEG00000013099	-	100	93.132	ENSPTIG00000008011	KARS	100	93.132	Panthera_tigris_altaica
ENSODEG00000013099	-	100	92.965	ENSPTRG00000008364	KARS	100	92.965	Pan_troglodytes
ENSODEG00000013099	-	100	92.295	ENSPANG00000024106	KARS	100	92.000	Papio_anubis
ENSODEG00000013099	-	99	77.759	ENSPKIG00000009896	kars	99	79.796	Paramormyrops_kingsleyae
ENSODEG00000013099	-	97	86.022	ENSPSIG00000009294	KARS	96	86.583	Pelodiscus_sinensis
ENSODEG00000013099	-	91	73.724	ENSPSIG00000003041	-	97	73.724	Pelodiscus_sinensis
ENSODEG00000013099	-	92	82.674	ENSPMGG00000006117	kars	100	80.000	Periophthalmus_magnuspinnatus
ENSODEG00000013099	-	100	92.480	ENSPEMG00000012277	Kars	100	92.480	Peromyscus_maniculatus_bairdii
ENSODEG00000013099	-	97	76.554	ENSPMAG00000008360	-	99	72.698	Petromyzon_marinus
ENSODEG00000013099	-	99	90.104	ENSPCIG00000010761	-	100	89.615	Phascolarctos_cinereus
ENSODEG00000013099	-	99	84.174	ENSPCIG00000025469	-	99	82.183	Phascolarctos_cinereus
ENSODEG00000013099	-	97	80.605	ENSPFOG00000013253	kars	99	76.809	Poecilia_formosa
ENSODEG00000013099	-	97	80.605	ENSPLAG00000004189	kars	99	80.522	Poecilia_latipinna
ENSODEG00000013099	-	97	80.783	ENSPMEG00000015698	kars	99	80.696	Poecilia_mexicana
ENSODEG00000013099	-	98	79.505	ENSPREG00000023179	kars	99	79.310	Poecilia_reticulata
ENSODEG00000013099	-	99	93.588	ENSPPYG00000007567	KARS	100	92.480	Pongo_abelii
ENSODEG00000013099	-	90	84.512	ENSPCAG00000010790	KARS	100	84.512	Procavia_capensis
ENSODEG00000013099	-	100	84.480	ENSPCOG00000003166	KARS	100	84.480	Propithecus_coquereli
ENSODEG00000013099	-	99	92.894	ENSPVAG00000006746	KARS	100	91.667	Pteropus_vampyrus
ENSODEG00000013099	-	98	80.247	ENSPNYG00000013095	kars	97	80.243	Pundamilia_nyererei
ENSODEG00000013099	-	97	82.796	ENSPNAG00000013828	kars	98	82.343	Pygocentrus_nattereri
ENSODEG00000013099	-	100	91.374	ENSRNOG00000019456	Kars	100	91.374	Rattus_norvegicus
ENSODEG00000013099	-	99	92.361	ENSRBIG00000030118	KARS	99	91.795	Rhinopithecus_bieti
ENSODEG00000013099	-	100	91.520	ENSRROG00000041418	KARS	100	91.520	Rhinopithecus_roxellana
ENSODEG00000013099	-	77	34.110	YNL073W	-	81	34.110	Saccharomyces_cerevisiae
ENSODEG00000013099	-	95	56.294	YDR037W	KRS1	96	56.014	Saccharomyces_cerevisiae
ENSODEG00000013099	-	100	93.635	ENSSBOG00000019255	KARS	100	93.635	Saimiri_boliviensis_boliviensis
ENSODEG00000013099	-	96	75.632	ENSSHAG00000009005	-	99	75.632	Sarcophilus_harrisii
ENSODEG00000013099	-	99	83.305	ENSSHAG00000001359	-	99	83.305	Sarcophilus_harrisii
ENSODEG00000013099	-	99	73.519	ENSSHAG00000002050	-	99	72.392	Sarcophilus_harrisii
ENSODEG00000013099	-	99	79.685	ENSSFOG00015014837	kars	100	79.685	Scleropages_formosus
ENSODEG00000013099	-	98	79.545	ENSSMAG00000021441	kars	99	80.172	Scophthalmus_maximus
ENSODEG00000013099	-	98	80.919	ENSSDUG00000001202	kars	99	80.895	Seriola_dumerili
ENSODEG00000013099	-	98	80.919	ENSSLDG00000021220	kars	98	80.454	Seriola_lalandi_dorsalis
ENSODEG00000013099	-	79	94.895	ENSSARG00000011493	KARS	79	94.895	Sorex_araneus
ENSODEG00000013099	-	63	67.218	ENSSPUG00000000449	-	85	67.218	Sphenodon_punctatus
ENSODEG00000013099	-	99	83.507	ENSSPUG00000004974	KARS	100	82.441	Sphenodon_punctatus
ENSODEG00000013099	-	99	79.549	ENSSPAG00000020365	kars	98	79.038	Stegastes_partitus
ENSODEG00000013099	-	100	92.797	ENSSSCG00000002704	KARS	100	92.797	Sus_scrofa
ENSODEG00000013099	-	97	85.510	ENSTGUG00000008400	KARS	99	85.510	Taeniopygia_guttata
ENSODEG00000013099	-	97	78.646	ENSTRUG00000017551	kars	99	76.694	Takifugu_rubripes
ENSODEG00000013099	-	93	80.319	ENSTNIG00000009351	kars	98	78.547	Tetraodon_nigroviridis
ENSODEG00000013099	-	99	72.222	ENSTBEG00000004610	KARS	100	72.222	Tupaia_belangeri
ENSODEG00000013099	-	99	92.201	ENSTTRG00000001221	KARS	100	91.200	Tursiops_truncatus
ENSODEG00000013099	-	100	91.625	ENSUAMG00000017557	KARS	100	91.625	Ursus_americanus
ENSODEG00000013099	-	100	91.520	ENSUMAG00000014559	KARS	100	91.520	Ursus_maritimus
ENSODEG00000013099	-	100	91.040	ENSVPAG00000003716	KARS	100	91.040	Vicugna_pacos
ENSODEG00000013099	-	100	91.696	ENSVVUG00000024338	KARS	100	91.625	Vulpes_vulpes
ENSODEG00000013099	-	99	77.836	ENSXETG00000003569	kars	100	76.858	Xenopus_tropicalis
ENSODEG00000013099	-	97	79.574	ENSXCOG00000011313	kars	99	79.574	Xiphophorus_couchianus
ENSODEG00000013099	-	98	79.682	ENSXMAG00000003191	kars	99	79.655	Xiphophorus_maculatus