EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1607 bases
Position: chrJH651522.1:14174093-14175699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017786	KH_2	PF07650.17	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018012	-	357	-	ENSODEP00000017786	118 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013117	-	70	96.386	ENSODEG00000006804	-	52	96.386
ENSODEG00000013117	-	70	84.337	ENSODEG00000001789	-	53	84.337
ENSODEG00000013117	-	70	81.928	ENSODEG00000003742	-	69	81.928
ENSODEG00000013117	-	70	95.181	ENSODEG00000004737	-	90	95.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013117	-	70	98.795	ENSG00000149273	RPS3	91	98.795	Homo_sapiens
ENSODEG00000013117	-	81	90.526	ENSAPOG00000001551	-	95	90.526	Acanthochromis_polyacanthus
ENSODEG00000013117	-	70	98.795	ENSANAG00000027669	-	91	98.795	Aotus_nancymaae
ENSODEG00000013117	-	69	84.146	ENSANAG00000022561	-	89	84.146	Aotus_nancymaae
ENSODEG00000013117	-	77	93.407	ENSANAG00000019985	-	89	93.407	Aotus_nancymaae
ENSODEG00000013117	-	70	98.795	ENSACLG00000013763	rps3	67	62.821	Astatotilapia_calliptera
ENSODEG00000013117	-	70	97.590	ENSAMXG00000013642	rps3	53	97.590	Astyanax_mexicanus
ENSODEG00000013117	-	69	76.829	ENSBTAG00000051928	-	96	76.829	Bos_taurus
ENSODEG00000013117	-	70	98.795	ENSCJAG00000015424	RPS3	91	98.795	Callithrix_jacchus
ENSODEG00000013117	-	70	91.566	ENSCJAG00000041948	-	89	91.566	Callithrix_jacchus
ENSODEG00000013117	-	70	98.795	ENSTSYG00000008664	-	91	98.795	Carlito_syrichta
ENSODEG00000013117	-	70	93.976	ENSTSYG00000034881	-	91	93.976	Carlito_syrichta
ENSODEG00000013117	-	70	98.795	ENSCPOG00000004665	-	57	98.795	Cavia_porcellus
ENSODEG00000013117	-	70	98.795	ENSCCAG00000022155	RPS3	91	98.795	Cebus_capucinus
ENSODEG00000013117	-	74	88.636	ENSCCAG00000021048	-	73	88.636	Cebus_capucinus
ENSODEG00000013117	-	70	80.723	ENSCATG00000037875	-	55	80.723	Cercocebus_atys
ENSODEG00000013117	-	70	85.542	ENSCATG00000043998	-	57	85.542	Cercocebus_atys
ENSODEG00000013117	-	70	98.795	ENSCATG00000035348	-	72	98.795	Cercocebus_atys
ENSODEG00000013117	-	70	98.795	ENSCANG00000036026	RPS3	91	98.795	Colobus_angolensis_palliatus
ENSODEG00000013117	-	62	98.630	ENSCGRG00000004739	-	54	98.630	Cricetulus_griseus_crigri
ENSODEG00000013117	-	70	80.723	ENSDORG00000025518	-	85	80.723	Dipodomys_ordii
ENSODEG00000013117	-	70	98.795	ENSFCAG00000011942	-	53	98.795	Felis_catus
ENSODEG00000013117	-	72	77.647	ENSFCAG00000029480	-	72	77.647	Felis_catus
ENSODEG00000013117	-	70	69.880	ENSFCAG00000033114	-	51	69.880	Felis_catus
ENSODEG00000013117	-	70	98.795	ENSFDAG00000016319	-	58	98.795	Fukomys_damarensis
ENSODEG00000013117	-	73	72.093	ENSFDAG00000012411	-	96	72.093	Fukomys_damarensis
ENSODEG00000013117	-	70	97.590	ENSGGOG00000037758	-	72	97.590	Gorilla_gorilla
ENSODEG00000013117	-	70	98.795	ENSGGOG00000006519	RPS3	72	98.795	Gorilla_gorilla
ENSODEG00000013117	-	76	87.778	ENSGGOG00000026674	-	89	87.778	Gorilla_gorilla
ENSODEG00000013117	-	54	96.875	ENSHGLG00000015886	-	67	96.875	Heterocephalus_glaber_female
ENSODEG00000013117	-	70	98.795	ENSHGLG00000019339	RPS3	58	98.795	Heterocephalus_glaber_female
ENSODEG00000013117	-	70	98.795	ENSHGLG00100012857	RPS3	58	98.795	Heterocephalus_glaber_male
ENSODEG00000013117	-	70	98.795	ENSSTOG00000028813	-	56	98.795	Ictidomys_tridecemlineatus
ENSODEG00000013117	-	70	98.795	ENSJJAG00000017023	-	66	97.619	Jaculus_jaculus
ENSODEG00000013117	-	70	97.590	ENSLBEG00000021017	rps3	75	97.590	Labrus_bergylta
ENSODEG00000013117	-	70	98.795	ENSMFAG00000000525	RPS3	91	98.795	Macaca_fascicularis
ENSODEG00000013117	-	70	98.795	ENSMMUG00000009019	RPS3	53	98.795	Macaca_mulatta
ENSODEG00000013117	-	70	98.795	ENSMNEG00000032069	-	91	98.795	Macaca_nemestrina
ENSODEG00000013117	-	70	98.795	ENSMLEG00000027047	RPS3	72	98.795	Mandrillus_leucophaeus
ENSODEG00000013117	-	70	80.723	ENSMLEG00000032606	-	89	80.723	Mandrillus_leucophaeus
ENSODEG00000013117	-	69	87.805	ENSMLEG00000044314	-	85	85.714	Mandrillus_leucophaeus
ENSODEG00000013117	-	70	98.795	ENSMAUG00000012031	-	57	98.795	Mesocricetus_auratus
ENSODEG00000013117	-	77	65.217	ENSMICG00000033427	-	74	71.951	Microcebus_murinus
ENSODEG00000013117	-	70	98.795	ENSMICG00000030910	-	94	98.795	Microcebus_murinus
ENSODEG00000013117	-	70	98.795	ENSMOCG00000007699	Rps3	57	98.795	Microtus_ochrogaster
ENSODEG00000013117	-	70	98.795	ENSMUSG00000030744	Rps3	58	98.795	Mus_musculus
ENSODEG00000013117	-	59	78.571	ENSNLEG00000029322	-	64	78.571	Nomascus_leucogenys
ENSODEG00000013117	-	70	81.928	ENSNLEG00000027260	-	54	81.928	Nomascus_leucogenys
ENSODEG00000013117	-	70	97.590	ENSOANG00000029410	-	58	97.590	Ornithorhynchus_anatinus
ENSODEG00000013117	-	53	98.413	ENSOMEG00000013827	-	65	98.413	Oryzias_melastigma
ENSODEG00000013117	-	70	98.795	ENSPPAG00000029211	RPS3	72	98.795	Pan_paniscus
ENSODEG00000013117	-	70	89.157	ENSPPAG00000033710	-	89	89.157	Pan_paniscus
ENSODEG00000013117	-	72	77.647	ENSPPRG00000000760	-	52	77.647	Panthera_pardus
ENSODEG00000013117	-	70	98.795	ENSPPRG00000021200	-	53	98.795	Panthera_pardus
ENSODEG00000013117	-	70	98.795	ENSPTIG00000012777	-	53	98.795	Panthera_tigris_altaica
ENSODEG00000013117	-	92	73.394	ENSPTRG00000015680	-	89	73.394	Pan_troglodytes
ENSODEG00000013117	-	70	98.795	ENSPTRG00000048574	RPS3	72	98.795	Pan_troglodytes
ENSODEG00000013117	-	70	98.795	ENSPANG00000016549	-	72	98.795	Papio_anubis
ENSODEG00000013117	-	70	93.976	ENSPCIG00000022539	-	55	93.976	Phascolarctos_cinereus
ENSODEG00000013117	-	70	85.542	ENSPCIG00000026362	-	81	85.542	Phascolarctos_cinereus
ENSODEG00000013117	-	70	98.795	ENSPCOG00000028750	RPS3	59	98.795	Propithecus_coquereli
ENSODEG00000013117	-	69	67.901	ENSPCOG00000024652	-	54	67.901	Propithecus_coquereli
ENSODEG00000013117	-	70	95.181	ENSPCOG00000021977	-	89	95.181	Propithecus_coquereli
ENSODEG00000013117	-	81	80.000	ENSPCOG00000026192	-	75	80.000	Propithecus_coquereli
ENSODEG00000013117	-	70	67.470	ENSPNYG00000007471	-	94	67.470	Pundamilia_nyererei
ENSODEG00000013117	-	70	80.723	ENSRBIG00000033623	-	52	80.723	Rhinopithecus_bieti
ENSODEG00000013117	-	76	92.222	ENSRBIG00000042266	-	100	92.222	Rhinopithecus_bieti
ENSODEG00000013117	-	70	98.795	ENSRBIG00000044916	RPS3	59	98.795	Rhinopithecus_bieti
ENSODEG00000013117	-	70	98.795	ENSRROG00000039976	-	75	98.795	Rhinopithecus_roxellana
ENSODEG00000013117	-	70	98.795	ENSRROG00000009870	RPS3	59	98.795	Rhinopithecus_roxellana
ENSODEG00000013117	-	70	98.795	ENSRROG00000032977	-	71	98.795	Rhinopithecus_roxellana
ENSODEG00000013117	-	70	98.795	ENSSBOG00000021847	-	91	98.795	Saimiri_boliviensis_boliviensis
ENSODEG00000013117	-	70	84.337	ENSSLDG00000007403	-	62	84.337	Seriola_lalandi_dorsalis
ENSODEG00000013117	-	70	97.590	ENSTGUG00000016614	-	96	97.590	Taeniopygia_guttata
ENSODEG00000013117	-	76	77.174	ENSUAMG00000007373	-	100	77.174	Ursus_americanus
ENSODEG00000013117	-	70	75.904	ENSVVUG00000018431	-	55	75.904	Vulpes_vulpes
ENSODEG00000013117	-	70	98.795	ENSXMAG00000004703	rps3	59	98.795	Xiphophorus_maculatus