EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013146 (Gene tree)
Gene ID: 101568695
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 176141 bases
Position: chrJH651579.1:11795783-11971923
Accession: 101568695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017819	Ago_hook	PF10427.9	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018045	TNRC6B-201	5442	XM_004634642	ENSODEP00000017819	1813 (aa)	XP_023574727	UPI000C9FCF9C

Gene Model

Click here to download ENSODEG00000013146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013146	TNRC6B	81	35.533	ENSODEG00000012499	TNRC6C	93	34.932
ENSODEG00000013146	TNRC6B	98	37.163	ENSODEG00000012802	TNRC6A	97	36.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013146	TNRC6B	98	93.906	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSODEG00000013146	TNRC6B	99	91.703	ENSAMEG00000011025	TNRC6B	100	90.919	Ailuropoda_melanoleuca
ENSODEG00000013146	TNRC6B	96	84.917	ENSAPLG00000009347	TNRC6B	100	84.576	Anas_platyrhynchos
ENSODEG00000013146	TNRC6B	97	73.288	ENSACAG00000007281	TNRC6B	99	73.569	Anolis_carolinensis
ENSODEG00000013146	TNRC6B	97	96.000	ENSANAG00000035042	TNRC6B	100	96.588	Aotus_nancymaae
ENSODEG00000013146	TNRC6B	84	47.714	ENSAMXG00000008707	tnrc6b	82	46.154	Astyanax_mexicanus
ENSODEG00000013146	TNRC6B	98	94.947	ENSBTAG00000021076	TNRC6B	99	95.088	Bos_taurus
ENSODEG00000013146	TNRC6B	97	96.202	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSODEG00000013146	TNRC6B	96	96.804	ENSCAFG00000001255	TNRC6B	100	93.501	Canis_familiaris
ENSODEG00000013146	TNRC6B	99	96.611	ENSCAFG00020002189	TNRC6B	99	96.611	Canis_lupus_dingo
ENSODEG00000013146	TNRC6B	99	94.936	ENSCHIG00000003491	TNRC6B	100	95.270	Capra_hircus
ENSODEG00000013146	TNRC6B	97	95.527	ENSTSYG00000011836	TNRC6B	100	95.882	Carlito_syrichta
ENSODEG00000013146	TNRC6B	100	98.842	ENSCPOG00000005705	TNRC6B	100	98.842	Cavia_porcellus
ENSODEG00000013146	TNRC6B	97	95.096	ENSCCAG00000019912	TNRC6B	97	97.282	Cebus_capucinus
ENSODEG00000013146	TNRC6B	96	97.020	ENSCATG00000029291	TNRC6B	99	97.020	Cercocebus_atys
ENSODEG00000013146	TNRC6B	100	99.228	ENSCLAG00000016942	TNRC6B	100	99.228	Chinchilla_lanigera
ENSODEG00000013146	TNRC6B	97	92.720	ENSCSAG00000006021	TNRC6B	99	92.720	Chlorocebus_sabaeus
ENSODEG00000013146	TNRC6B	89	85.357	ENSCPBG00000022932	TNRC6B	99	85.238	Chrysemys_picta_bellii
ENSODEG00000013146	TNRC6B	97	96.309	ENSCANG00000030776	TNRC6B	100	96.240	Colobus_angolensis_palliatus
ENSODEG00000013146	TNRC6B	96	95.650	ENSCGRG00001020166	Tnrc6b	99	95.478	Cricetulus_griseus_chok1gshd
ENSODEG00000013146	TNRC6B	100	95.921	ENSCGRG00000016696	Tnrc6b	99	95.529	Cricetulus_griseus_crigri
ENSODEG00000013146	TNRC6B	100	95.657	ENSDNOG00000012744	TNRC6B	100	95.659	Dasypus_novemcinctus
ENSODEG00000013146	TNRC6B	100	97.299	ENSDORG00000003386	Tnrc6b	100	97.299	Dipodomys_ordii
ENSODEG00000013146	TNRC6B	97	84.350	ENSETEG00000006570	TNRC6B	99	84.915	Echinops_telfairi
ENSODEG00000013146	TNRC6B	100	96.582	ENSEASG00005005306	TNRC6B	100	96.582	Equus_asinus_asinus
ENSODEG00000013146	TNRC6B	100	97.305	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSODEG00000013146	TNRC6B	59	97.070	ENSEEUG00000008690	-	62	97.070	Erinaceus_europaeus
ENSODEG00000013146	TNRC6B	100	96.813	ENSFCAG00000004791	TNRC6B	100	96.813	Felis_catus
ENSODEG00000013146	TNRC6B	93	88.007	ENSFALG00000012195	TNRC6B	100	87.831	Ficedula_albicollis
ENSODEG00000013146	TNRC6B	100	98.676	ENSFDAG00000021368	TNRC6B	100	98.676	Fukomys_damarensis
ENSODEG00000013146	TNRC6B	97	88.839	ENSGALG00000012050	TNRC6B	97	88.670	Gallus_gallus
ENSODEG00000013146	TNRC6B	97	88.083	ENSGAGG00000025188	TNRC6B	98	87.746	Gopherus_agassizii
ENSODEG00000013146	TNRC6B	97	96.646	ENSGGOG00000008444	TNRC6B	100	96.706	Gorilla_gorilla
ENSODEG00000013146	TNRC6B	100	98.458	ENSHGLG00000009306	TNRC6B	100	98.458	Heterocephalus_glaber_female
ENSODEG00000013146	TNRC6B	100	98.400	ENSHGLG00100018108	TNRC6B	100	98.400	Heterocephalus_glaber_male
ENSODEG00000013146	TNRC6B	67	48.688	ENSIPUG00000001515	tnrc6b	93	45.997	Ictalurus_punctatus
ENSODEG00000013146	TNRC6B	100	97.519	ENSSTOG00000008927	TNRC6B	100	97.519	Ictidomys_tridecemlineatus
ENSODEG00000013146	TNRC6B	100	95.422	ENSJJAG00000015779	Tnrc6b	100	95.422	Jaculus_jaculus
ENSODEG00000013146	TNRC6B	98	61.702	ENSLACG00000000628	-	99	62.061	Latimeria_chalumnae
ENSODEG00000013146	TNRC6B	76	95.283	ENSLAFG00000014473	TNRC6B	99	95.283	Loxodonta_africana
ENSODEG00000013146	TNRC6B	96	97.300	ENSMFAG00000003862	TNRC6B	99	97.135	Macaca_fascicularis
ENSODEG00000013146	TNRC6B	100	97.251	ENSMMUG00000021345	TNRC6B	99	97.498	Macaca_mulatta
ENSODEG00000013146	TNRC6B	97	97.120	ENSMNEG00000042745	TNRC6B	100	97.120	Macaca_nemestrina
ENSODEG00000013146	TNRC6B	96	97.135	ENSMLEG00000041780	TNRC6B	100	96.475	Mandrillus_leucophaeus
ENSODEG00000013146	TNRC6B	98	85.288	ENSMGAG00000012333	TNRC6B	99	90.601	Meleagris_gallopavo
ENSODEG00000013146	TNRC6B	100	95.259	ENSMAUG00000016123	Tnrc6b	100	95.259	Mesocricetus_auratus
ENSODEG00000013146	TNRC6B	99	95.191	ENSMICG00000014056	TNRC6B	100	97.119	Microcebus_murinus
ENSODEG00000013146	TNRC6B	97	96.000	ENSMOCG00000020334	Tnrc6b	100	96.000	Microtus_ochrogaster
ENSODEG00000013146	TNRC6B	100	96.141	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	96.141	Mus_caroli
ENSODEG00000013146	TNRC6B	100	95.865	ENSMUSG00000047888	Tnrc6b	100	95.976	Mus_musculus
ENSODEG00000013146	TNRC6B	100	95.698	MGP_PahariEiJ_G0020045	Tnrc6b	100	95.808	Mus_pahari
ENSODEG00000013146	TNRC6B	100	96.307	MGP_SPRETEiJ_G0020941	Tnrc6b	100	96.307	Mus_spretus
ENSODEG00000013146	TNRC6B	95	96.964	ENSMPUG00000016442	TNRC6B	99	86.957	Mustela_putorius_furo
ENSODEG00000013146	TNRC6B	97	90.969	ENSMLUG00000008765	TNRC6B	99	89.918	Myotis_lucifugus
ENSODEG00000013146	TNRC6B	100	96.916	ENSNGAG00000021294	Tnrc6b	100	96.916	Nannospalax_galili
ENSODEG00000013146	TNRC6B	86	95.446	ENSNLEG00000015311	TNRC6B	100	96.941	Nomascus_leucogenys
ENSODEG00000013146	TNRC6B	91	86.387	ENSOPRG00000012054	TNRC6B	88	91.266	Ochotona_princeps
ENSODEG00000013146	TNRC6B	100	95.875	ENSOCUG00000016128	TNRC6B	100	95.875	Oryctolagus_cuniculus
ENSODEG00000013146	TNRC6B	98	91.965	ENSOGAG00000011096	TNRC6B	99	91.067	Otolemur_garnettii
ENSODEG00000013146	TNRC6B	100	95.178	ENSOARG00000017238	TNRC6B	100	95.178	Ovis_aries
ENSODEG00000013146	TNRC6B	97	96.542	ENSPPAG00000028514	TNRC6B	100	96.349	Pan_paniscus
ENSODEG00000013146	TNRC6B	97	93.055	ENSPPRG00000017741	TNRC6B	100	96.362	Panthera_pardus
ENSODEG00000013146	TNRC6B	97	88.063	ENSPTIG00000022064	TNRC6B	98	89.736	Panthera_tigris_altaica
ENSODEG00000013146	TNRC6B	96	96.864	ENSPTRG00000047826	TNRC6B	100	96.706	Pan_troglodytes
ENSODEG00000013146	TNRC6B	96	87.246	ENSPANG00000009271	TNRC6B	99	88.380	Papio_anubis
ENSODEG00000013146	TNRC6B	97	88.133	ENSPSIG00000005318	TNRC6B	99	87.852	Pelodiscus_sinensis
ENSODEG00000013146	TNRC6B	100	96.198	ENSPEMG00000011403	Tnrc6b	100	96.198	Peromyscus_maniculatus_bairdii
ENSODEG00000013146	TNRC6B	97	86.436	ENSPCIG00000020347	TNRC6B	99	86.379	Phascolarctos_cinereus
ENSODEG00000013146	TNRC6B	97	39.289	ENSPFOG00000006033	-	96	42.641	Poecilia_formosa
ENSODEG00000013146	TNRC6B	98	93.557	ENSPPYG00000011849	TNRC6B	99	94.217	Pongo_abelii
ENSODEG00000013146	TNRC6B	77	89.358	ENSPCAG00000008739	TNRC6B	77	90.018	Procavia_capensis
ENSODEG00000013146	TNRC6B	99	95.720	ENSPCOG00000020790	TNRC6B	100	96.706	Propithecus_coquereli
ENSODEG00000013146	TNRC6B	93	96.463	ENSPVAG00000004975	TNRC6B	94	96.463	Pteropus_vampyrus
ENSODEG00000013146	TNRC6B	63	50.783	ENSPNAG00000011713	tnrc6b	72	46.942	Pygocentrus_nattereri
ENSODEG00000013146	TNRC6B	100	95.058	ENSRNOG00000024907	Tnrc6b	100	94.893	Rattus_norvegicus
ENSODEG00000013146	TNRC6B	95	96.488	ENSRBIG00000035576	TNRC6B	99	96.240	Rhinopithecus_bieti
ENSODEG00000013146	TNRC6B	97	96.894	ENSRROG00000031135	TNRC6B	100	96.894	Rhinopithecus_roxellana
ENSODEG00000013146	TNRC6B	97	93.793	ENSSBOG00000029743	TNRC6B	100	94.523	Saimiri_boliviensis_boliviensis
ENSODEG00000013146	TNRC6B	97	82.616	ENSSHAG00000009692	TNRC6B	99	81.769	Sarcophilus_harrisii
ENSODEG00000013146	TNRC6B	65	85.185	ENSSARG00000007971	-	70	84.746	Sorex_araneus
ENSODEG00000013146	TNRC6B	100	96.480	ENSSSCG00000000078	TNRC6B	99	96.350	Sus_scrofa
ENSODEG00000013146	TNRC6B	100	90.154	ENSTTRG00000011465	TNRC6B	100	90.264	Tursiops_truncatus
ENSODEG00000013146	TNRC6B	100	94.542	ENSUAMG00000007174	TNRC6B	99	94.986	Ursus_americanus
ENSODEG00000013146	TNRC6B	97	96.610	ENSUMAG00000014336	TNRC6B	100	96.610	Ursus_maritimus
ENSODEG00000013146	TNRC6B	68	91.111	ENSVPAG00000001467	TNRC6B	75	89.899	Vicugna_pacos
ENSODEG00000013146	TNRC6B	100	96.865	ENSVVUG00000007064	TNRC6B	100	96.826	Vulpes_vulpes