EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013177 (Gene tree)
Gene ID: 101560201
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 23153 bases
Position: chrJH651560.1:2812303-2835455
Accession: 101560201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017866	Nop52	PF05997.12	3.1e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018092	RRP1B-201	2109	XM_004631937	ENSODEP00000017866	702 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013177	RRP1B	100	61.397	ENSG00000160208	RRP1B	100	61.397	Homo_sapiens
ENSODEG00000013177	RRP1B	77	67.347	ENSAMEG00000011401	RRP1B	98	52.668	Ailuropoda_melanoleuca
ENSODEG00000013177	RRP1B	58	52.703	ENSAOCG00000017894	-	89	54.545	Amphiprion_ocellaris
ENSODEG00000013177	RRP1B	65	54.266	ENSAPLG00000004310	RRP1B	78	54.266	Anas_platyrhynchos
ENSODEG00000013177	RRP1B	64	59.055	ENSACAG00000017851	RRP1B	57	59.055	Anolis_carolinensis
ENSODEG00000013177	RRP1B	100	60.105	ENSANAG00000034889	RRP1B	100	60.105	Aotus_nancymaae
ENSODEG00000013177	RRP1B	100	56.317	ENSBTAG00000017418	RRP1B	100	56.317	Bos_taurus
ENSODEG00000013177	RRP1B	100	59.289	ENSCJAG00000017077	RRP1B	100	59.289	Callithrix_jacchus
ENSODEG00000013177	RRP1B	94	55.853	ENSCAFG00000010621	RRP1B	99	56.276	Canis_familiaris
ENSODEG00000013177	RRP1B	100	58.199	ENSCAFG00020018901	RRP1B	100	58.602	Canis_lupus_dingo
ENSODEG00000013177	RRP1B	100	56.032	ENSCHIG00000021519	RRP1B	100	56.032	Capra_hircus
ENSODEG00000013177	RRP1B	100	70.096	ENSCPOG00000002396	RRP1B	100	70.233	Cavia_porcellus
ENSODEG00000013177	RRP1B	100	59.658	ENSCCAG00000029384	RRP1B	100	59.658	Cebus_capucinus
ENSODEG00000013177	RRP1B	100	60.392	ENSCATG00000017423	RRP1B	100	60.392	Cercocebus_atys
ENSODEG00000013177	RRP1B	100	73.464	ENSCLAG00000005622	RRP1B	100	73.464	Chinchilla_lanigera
ENSODEG00000013177	RRP1B	100	61.265	ENSCSAG00000007961	RRP1B	100	61.265	Chlorocebus_sabaeus
ENSODEG00000013177	RRP1B	100	61.397	ENSCANG00000040952	RRP1B	100	61.397	Colobus_angolensis_palliatus
ENSODEG00000013177	RRP1B	100	58.201	ENSCGRG00001010889	-	100	58.333	Cricetulus_griseus_chok1gshd
ENSODEG00000013177	RRP1B	100	58.112	ENSCGRG00001023882	-	100	58.245	Cricetulus_griseus_chok1gshd
ENSODEG00000013177	RRP1B	94	56.662	ENSCGRG00000001553	Rrp1b	97	56.723	Cricetulus_griseus_crigri
ENSODEG00000013177	RRP1B	58	56.322	ENSCSEG00000020711	-	73	56.322	Cynoglossus_semilaevis
ENSODEG00000013177	RRP1B	100	54.425	ENSDNOG00000032774	RRP1B	100	54.425	Dasypus_novemcinctus
ENSODEG00000013177	RRP1B	93	53.607	ENSDORG00000005496	Rrp1b	100	53.748	Dipodomys_ordii
ENSODEG00000013177	RRP1B	93	80.952	ENSETEG00000019489	RRP1B	93	80.952	Echinops_telfairi
ENSODEG00000013177	RRP1B	100	59.318	ENSEASG00005001687	RRP1B	100	59.318	Equus_asinus_asinus
ENSODEG00000013177	RRP1B	100	59.289	ENSECAG00000018018	RRP1B	100	59.211	Equus_caballus
ENSODEG00000013177	RRP1B	65	50.769	ENSELUG00000015885	-	89	43.385	Esox_lucius
ENSODEG00000013177	RRP1B	100	58.566	ENSFCAG00000010272	RRP1B	100	59.677	Felis_catus
ENSODEG00000013177	RRP1B	96	67.192	ENSFDAG00000010899	RRP1B	96	67.719	Fukomys_damarensis
ENSODEG00000013177	RRP1B	63	46.364	ENSGMOG00000001953	-	62	46.364	Gadus_morhua
ENSODEG00000013177	RRP1B	79	54.790	ENSGALG00000035696	RRP1B	75	54.790	Gallus_gallus
ENSODEG00000013177	RRP1B	65	45.968	ENSGACG00000001438	rrp1	100	33.153	Gasterosteus_aculeatus
ENSODEG00000013177	RRP1B	79	57.522	ENSGAGG00000000375	RRP1B	100	42.386	Gopherus_agassizii
ENSODEG00000013177	RRP1B	100	61.397	ENSGGOG00000012069	RRP1B	100	61.397	Gorilla_gorilla
ENSODEG00000013177	RRP1B	99	71.156	ENSHGLG00000004968	RRP1B	100	71.156	Heterocephalus_glaber_female
ENSODEG00000013177	RRP1B	90	70.796	ENSHGLG00100002232	RRP1B	98	64.656	Heterocephalus_glaber_male
ENSODEG00000013177	RRP1B	66	42.361	ENSHCOG00000018388	-	58	42.361	Hippocampus_comes
ENSODEG00000013177	RRP1B	61	47.917	ENSIPUG00000000673	-	67	41.311	Ictalurus_punctatus
ENSODEG00000013177	RRP1B	99	61.058	ENSSTOG00000011790	RRP1B	96	61.342	Ictidomys_tridecemlineatus
ENSODEG00000013177	RRP1B	100	55.556	ENSJJAG00000021279	Rrp1b	100	56.568	Jaculus_jaculus
ENSODEG00000013177	RRP1B	65	53.175	ENSLOCG00000004064	-	100	34.839	Lepisosteus_oculatus
ENSODEG00000013177	RRP1B	87	51.584	ENSLAFG00000000766	RRP1B	98	57.987	Loxodonta_africana
ENSODEG00000013177	RRP1B	100	60.654	ENSMFAG00000039152	RRP1B	100	60.654	Macaca_fascicularis
ENSODEG00000013177	RRP1B	100	58.693	ENSMMUG00000000104	RRP1B	100	58.693	Macaca_mulatta
ENSODEG00000013177	RRP1B	100	60.523	ENSMNEG00000034269	RRP1B	100	60.523	Macaca_nemestrina
ENSODEG00000013177	RRP1B	94	59.141	ENSMLEG00000040044	RRP1B	99	59.141	Mandrillus_leucophaeus
ENSODEG00000013177	RRP1B	71	54.192	ENSMGAG00000014591	RRP1B	75	54.192	Meleagris_gallopavo
ENSODEG00000013177	RRP1B	100	58.276	ENSMAUG00000021508	Rrp1b	100	58.470	Mesocricetus_auratus
ENSODEG00000013177	RRP1B	100	61.816	ENSMICG00000004686	RRP1B	100	61.949	Microcebus_murinus
ENSODEG00000013177	RRP1B	100	55.855	ENSMOCG00000001117	Rrp1b	100	56.797	Microtus_ochrogaster
ENSODEG00000013177	RRP1B	100	52.270	ENSMODG00000021033	RRP1B	100	52.591	Monodelphis_domestica
ENSODEG00000013177	RRP1B	100	56.775	MGP_CAROLIEiJ_G0021376	Rrp1b	100	57.182	Mus_caroli
ENSODEG00000013177	RRP1B	100	57.866	ENSMUSG00000058392	Rrp1b	100	57.866	Mus_musculus
ENSODEG00000013177	RRP1B	100	56.283	MGP_PahariEiJ_G0023695	Rrp1b	100	56.551	Mus_pahari
ENSODEG00000013177	RRP1B	100	55.870	MGP_SPRETEiJ_G0022290	Rrp1b	100	56.410	Mus_spretus
ENSODEG00000013177	RRP1B	82	51.111	ENSMPUG00000009810	RRP1B	99	50.952	Mustela_putorius_furo
ENSODEG00000013177	RRP1B	99	59.230	ENSMLUG00000007738	RRP1B	99	59.230	Myotis_lucifugus
ENSODEG00000013177	RRP1B	100	58.480	ENSNGAG00000021073	Rrp1b	100	58.616	Nannospalax_galili
ENSODEG00000013177	RRP1B	100	60.000	ENSNLEG00000001490	RRP1B	100	60.000	Nomascus_leucogenys
ENSODEG00000013177	RRP1B	61	79.832	ENSMEUG00000003226	-	75	79.832	Notamacropus_eugenii
ENSODEG00000013177	RRP1B	94	52.562	ENSOCUG00000025931	RRP1B	100	52.187	Oryctolagus_cuniculus
ENSODEG00000013177	RRP1B	58	53.086	ENSORLG00020007199	-	50	53.086	Oryzias_latipes_hni
ENSODEG00000013177	RRP1B	65	44.118	ENSORLG00015004425	-	53	44.118	Oryzias_latipes_hsok
ENSODEG00000013177	RRP1B	58	54.321	ENSOMEG00000016910	-	52	54.321	Oryzias_melastigma
ENSODEG00000013177	RRP1B	98	55.108	ENSOGAG00000009872	RRP1B	100	55.827	Otolemur_garnettii
ENSODEG00000013177	RRP1B	94	53.210	ENSOARG00000011314	RRP1B	100	53.352	Ovis_aries
ENSODEG00000013177	RRP1B	94	59.637	ENSPPAG00000035319	RRP1B	99	59.554	Pan_paniscus
ENSODEG00000013177	RRP1B	100	58.579	ENSPPRG00000010356	RRP1B	100	59.540	Panthera_pardus
ENSODEG00000013177	RRP1B	72	73.282	ENSPTIG00000016894	RRP1B	88	75.194	Panthera_tigris_altaica
ENSODEG00000013177	RRP1B	100	61.133	ENSPTRG00000013958	RRP1B	100	61.133	Pan_troglodytes
ENSODEG00000013177	RRP1B	100	60.915	ENSPANG00000011090	RRP1B	100	60.915	Papio_anubis
ENSODEG00000013177	RRP1B	64	52.101	ENSPKIG00000003422	-	55	52.101	Paramormyrops_kingsleyae
ENSODEG00000013177	RRP1B	100	58.165	ENSPEMG00000022490	Rrp1b	100	59.030	Peromyscus_maniculatus_bairdii
ENSODEG00000013177	RRP1B	100	52.660	ENSPCIG00000015513	RRP1B	100	53.121	Phascolarctos_cinereus
ENSODEG00000013177	RRP1B	66	43.448	ENSPFOG00000007424	-	61	43.448	Poecilia_formosa
ENSODEG00000013177	RRP1B	69	43.658	ENSPMEG00000007042	-	59	43.988	Poecilia_mexicana
ENSODEG00000013177	RRP1B	69	43.529	ENSPREG00000015673	-	59	43.529	Poecilia_reticulata
ENSODEG00000013177	RRP1B	100	61.397	ENSPPYG00000011470	RRP1B	100	61.397	Pongo_abelii
ENSODEG00000013177	RRP1B	84	81.053	ENSPCAG00000013723	RRP1B	91	81.053	Procavia_capensis
ENSODEG00000013177	RRP1B	100	61.962	ENSPCOG00000017927	RRP1B	100	62.366	Propithecus_coquereli
ENSODEG00000013177	RRP1B	99	53.194	ENSPVAG00000001436	RRP1B	99	54.749	Pteropus_vampyrus
ENSODEG00000013177	RRP1B	52	39.286	ENSPVAG00000009925	-	76	39.286	Pteropus_vampyrus
ENSODEG00000013177	RRP1B	100	57.760	ENSRNOG00000001194	Rrp1b	100	58.165	Rattus_norvegicus
ENSODEG00000013177	RRP1B	100	56.917	ENSRBIG00000041689	RRP1B	100	56.917	Rhinopithecus_bieti
ENSODEG00000013177	RRP1B	100	61.001	ENSRROG00000031499	RRP1B	100	61.001	Rhinopithecus_roxellana
ENSODEG00000013177	RRP1B	94	56.183	ENSSBOG00000034727	RRP1B	99	56.452	Saimiri_boliviensis_boliviensis
ENSODEG00000013177	RRP1B	100	51.429	ENSSHAG00000017789	RRP1B	100	52.140	Sarcophilus_harrisii
ENSODEG00000013177	RRP1B	61	44.853	ENSSFOG00015003932	-	57	44.928	Scleropages_formosus
ENSODEG00000013177	RRP1B	64	49.612	ENSSMAG00000016847	-	84	42.059	Scophthalmus_maximus
ENSODEG00000013177	RRP1B	64	48.462	ENSSDUG00000000551	-	50	48.855	Seriola_dumerili
ENSODEG00000013177	RRP1B	64	48.462	ENSSLDG00000002538	-	50	48.855	Seriola_lalandi_dorsalis
ENSODEG00000013177	RRP1B	78	57.143	ENSSARG00000003108	-	78	57.143	Sorex_araneus
ENSODEG00000013177	RRP1B	100	53.649	ENSSSCG00000021698	RRP1B	100	55.238	Sus_scrofa
ENSODEG00000013177	RRP1B	73	52.759	ENSTGUG00000005926	RRP1B	74	52.759	Taeniopygia_guttata
ENSODEG00000013177	RRP1B	68	46.316	ENSTNIG00000005053	rrp1	97	34.632	Tetraodon_nigroviridis
ENSODEG00000013177	RRP1B	94	52.006	ENSTBEG00000000422	RRP1B	93	74.315	Tupaia_belangeri
ENSODEG00000013177	RRP1B	100	54.899	ENSTTRG00000000723	RRP1B	100	55.302	Tursiops_truncatus
ENSODEG00000013177	RRP1B	100	58.149	ENSUAMG00000026765	RRP1B	100	58.287	Ursus_americanus
ENSODEG00000013177	RRP1B	59	75.000	ENSUMAG00000025510	RRP1B	81	74.219	Ursus_maritimus
ENSODEG00000013177	RRP1B	94	56.294	ENSVVUG00000024509	RRP1B	99	56.719	Vulpes_vulpes
ENSODEG00000013177	RRP1B	65	44.375	ENSXETG00000013683	rrp1b	70	45.342	Xenopus_tropicalis
ENSODEG00000013177	RRP1B	69	42.775	ENSXMAG00000023123	-	58	46.154	Xiphophorus_maculatus