EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013217 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 53422 bases
Position: chrJH651675.1:4580070-4633491
Accession: 101580166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017928	RRM_1	PF00076.22	2.6e-51	1	3
ENSODEP00000017928	RRM_1	PF00076.22	2.6e-51	2	3
ENSODEP00000017928	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018155	-	1986	XM_012517263	ENSODEP00000017928	662 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013217	-	84	91.960	ENSODEG00000003213	-	76	91.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013217	-	83	88.413	ENSG00000106344	RBM28	76	88.413	Homo_sapiens
ENSODEG00000013217	-	77	56.749	ENSAPOG00000015512	rbm28	72	56.836	Acanthochromis_polyacanthus
ENSODEG00000013217	-	81	90.123	ENSAMEG00000004776	RBM28	65	90.123	Ailuropoda_melanoleuca
ENSODEG00000013217	-	55	55.882	ENSACIG00000023153	rbm28	75	56.734	Amphilophus_citrinellus
ENSODEG00000013217	-	77	57.025	ENSAOCG00000000462	rbm28	76	54.412	Amphiprion_ocellaris
ENSODEG00000013217	-	77	57.064	ENSAPEG00000012996	rbm28	72	57.143	Amphiprion_percula
ENSODEG00000013217	-	83	52.336	ENSATEG00000001672	rbm28	80	52.907	Anabas_testudineus
ENSODEG00000013217	-	100	69.198	ENSANAG00000033922	RBM28	94	69.620	Aotus_nancymaae
ENSODEG00000013217	-	79	57.219	ENSACLG00000025024	rbm28	73	58.400	Astatotilapia_calliptera
ENSODEG00000013217	-	55	61.035	ENSAMXG00000000763	rbm28	85	62.842	Astyanax_mexicanus
ENSODEG00000013217	-	82	85.788	ENSBTAG00000017001	RBM28	77	84.925	Bos_taurus
ENSODEG00000013217	-	87	86.902	ENSCJAG00000017731	RBM28	80	86.902	Callithrix_jacchus
ENSODEG00000013217	-	83	88.161	ENSCAFG00000001667	RBM28	77	88.161	Canis_familiaris
ENSODEG00000013217	-	83	88.161	ENSCAFG00020021648	RBM28	77	88.161	Canis_lupus_dingo
ENSODEG00000013217	-	82	85.751	ENSCHIG00000014146	RBM28	77	84.887	Capra_hircus
ENSODEG00000013217	-	83	88.161	ENSTSYG00000002892	RBM28	77	88.161	Carlito_syrichta
ENSODEG00000013217	-	72	80.303	ENSCAPG00000013218	RBM28	75	89.831	Cavia_aperea
ENSODEG00000013217	-	87	89.100	ENSCPOG00000006253	RBM28	94	72.549	Cavia_porcellus
ENSODEG00000013217	-	87	87.657	ENSCCAG00000035105	RBM28	79	87.657	Cebus_capucinus
ENSODEG00000013217	-	83	89.421	ENSCATG00000040497	RBM28	76	89.421	Cercocebus_atys
ENSODEG00000013217	-	79	94.221	ENSCLAG00000003707	RBM28	76	94.221	Chinchilla_lanigera
ENSODEG00000013217	-	83	89.673	ENSCSAG00000010161	RBM28	76	89.673	Chlorocebus_sabaeus
ENSODEG00000013217	-	57	91.358	ENSCHOG00000001994	-	57	91.358	Choloepus_hoffmanni
ENSODEG00000013217	-	58	58.705	ENSCPBG00000018088	RBM28	83	59.333	Chrysemys_picta_bellii
ENSODEG00000013217	-	75	63.158	ENSCING00000009238	-	60	63.158	Ciona_intestinalis
ENSODEG00000013217	-	50	42.899	ENSCSAVG00000007149	-	94	42.814	Ciona_savignyi
ENSODEG00000013217	-	72	94.231	ENSCANG00000038397	RBM28	73	94.231	Colobus_angolensis_palliatus
ENSODEG00000013217	-	83	84.635	ENSCGRG00001021278	Rbm28	74	84.635	Cricetulus_griseus_chok1gshd
ENSODEG00000013217	-	83	84.635	ENSCGRG00000005098	Rbm28	76	84.635	Cricetulus_griseus_crigri
ENSODEG00000013217	-	99	45.874	ENSCSEG00000004212	rbm28	90	46.454	Cynoglossus_semilaevis
ENSODEG00000013217	-	83	56.500	ENSCVAG00000010493	rbm28	72	57.672	Cyprinodon_variegatus
ENSODEG00000013217	-	79	62.295	ENSDARG00000025332	rbm28	72	65.517	Danio_rerio
ENSODEG00000013217	-	84	86.181	ENSDNOG00000001124	RBM28	76	86.181	Dasypus_novemcinctus
ENSODEG00000013217	-	63	80.233	ENSDORG00000004184	Rbm28	84	80.233	Dipodomys_ordii
ENSODEG00000013217	-	80	76.344	ENSETEG00000007130	RBM28	73	76.344	Echinops_telfairi
ENSODEG00000013217	-	79	48.774	ENSEBUG00000004419	rbm28	88	39.753	Eptatretus_burgeri
ENSODEG00000013217	-	84	88.693	ENSEASG00005008528	RBM28	75	88.693	Equus_asinus_asinus
ENSODEG00000013217	-	84	87.688	ENSECAG00000007745	RBM28	75	87.688	Equus_caballus
ENSODEG00000013217	-	84	75.689	ENSEEUG00000002389	RBM28	76	75.689	Erinaceus_europaeus
ENSODEG00000013217	-	82	57.598	ENSELUG00000020602	rbm28	90	48.017	Esox_lucius
ENSODEG00000013217	-	99	68.857	ENSFCAG00000000946	RBM28	94	69.714	Felis_catus
ENSODEG00000013217	-	84	92.965	ENSFDAG00000010169	RBM28	81	88.498	Fukomys_damarensis
ENSODEG00000013217	-	80	54.617	ENSGMOG00000007091	rbm28	89	46.759	Gadus_morhua
ENSODEG00000013217	-	58	57.398	ENSGAFG00000004802	rbm28	80	58.311	Gambusia_affinis
ENSODEG00000013217	-	82	57.881	ENSGACG00000012612	rbm28	78	56.642	Gasterosteus_aculeatus
ENSODEG00000013217	-	71	79.670	ENSGAGG00000008873	RBM28	73	79.670	Gopherus_agassizii
ENSODEG00000013217	-	81	83.841	ENSGGOG00000004644	RBM28	73	88.413	Gorilla_gorilla
ENSODEG00000013217	-	83	53.902	ENSHBUG00000009611	rbm28	75	58.133	Haplochromis_burtoni
ENSODEG00000013217	-	82	91.688	ENSHGLG00000005409	RBM28	94	72.702	Heterocephalus_glaber_female
ENSODEG00000013217	-	98	71.817	ENSHGLG00100016458	RBM28	94	72.702	Heterocephalus_glaber_male
ENSODEG00000013217	-	96	40.922	ENSHCOG00000010597	rbm28	90	41.912	Hippocampus_comes
ENSODEG00000013217	-	51	54.913	ENSIPUG00000007103	rbm28	74	53.955	Ictalurus_punctatus
ENSODEG00000013217	-	87	87.940	ENSSTOG00000002169	RBM28	78	87.940	Ictidomys_tridecemlineatus
ENSODEG00000013217	-	80	86.133	ENSJJAG00000022400	Rbm28	78	86.133	Jaculus_jaculus
ENSODEG00000013217	-	83	54.408	ENSKMAG00000013348	rbm28	89	44.798	Kryptolebias_marmoratus
ENSODEG00000013217	-	83	56.378	ENSLBEG00000012998	rbm28	71	57.609	Labrus_bergylta
ENSODEG00000013217	-	61	65.625	ENSLACG00000010485	-	99	50.783	Latimeria_chalumnae
ENSODEG00000013217	-	85	62.565	ENSLOCG00000015541	rbm28	69	63.415	Lepisosteus_oculatus
ENSODEG00000013217	-	84	86.181	ENSLAFG00000010717	RBM28	76	86.181	Loxodonta_africana
ENSODEG00000013217	-	83	89.169	ENSMFAG00000031036	RBM28	76	89.169	Macaca_fascicularis
ENSODEG00000013217	-	83	89.169	ENSMMUG00000007250	RBM28	76	89.169	Macaca_mulatta
ENSODEG00000013217	-	83	89.169	ENSMNEG00000036970	RBM28	94	70.621	Macaca_nemestrina
ENSODEG00000013217	-	65	94.079	ENSMLEG00000037717	RBM28	71	94.079	Mandrillus_leucophaeus
ENSODEG00000013217	-	81	58.684	ENSMAMG00000008525	rbm28	89	47.640	Mastacembelus_armatus
ENSODEG00000013217	-	71	57.219	ENSMZEG00005019625	rbm28	89	44.615	Maylandia_zebra
ENSODEG00000013217	-	83	83.375	ENSMAUG00000002263	Rbm28	74	83.375	Mesocricetus_auratus
ENSODEG00000013217	-	76	87.688	ENSMICG00000000107	RBM28	73	87.688	Microcebus_murinus
ENSODEG00000013217	-	87	81.146	ENSMOCG00000014615	Rbm28	79	81.146	Microtus_ochrogaster
ENSODEG00000013217	-	56	56.728	ENSMMOG00000008600	rbm28	84	54.453	Mola_mola
ENSODEG00000013217	-	81	78.701	ENSMODG00000015151	RBM28	75	78.772	Monodelphis_domestica
ENSODEG00000013217	-	83	54.798	ENSMALG00000006419	rbm28	71	56.452	Monopterus_albus
ENSODEG00000013217	-	84	86.181	MGP_CAROLIEiJ_G0028162	Rbm28	81	82.160	Mus_caroli
ENSODEG00000013217	-	87	82.160	ENSMUSG00000029701	Rbm28	81	82.160	Mus_musculus
ENSODEG00000013217	-	87	82.394	MGP_PahariEiJ_G0021920	Rbm28	80	82.394	Mus_pahari
ENSODEG00000013217	-	87	82.160	MGP_SPRETEiJ_G0029162	Rbm28	81	82.160	Mus_spretus
ENSODEG00000013217	-	83	86.216	ENSMPUG00000006511	RBM28	73	86.933	Mustela_putorius_furo
ENSODEG00000013217	-	87	83.333	ENSMLUG00000002186	RBM28	80	83.333	Myotis_lucifugus
ENSODEG00000013217	-	84	79.397	ENSNGAG00000017946	-	77	78.141	Nannospalax_galili
ENSODEG00000013217	-	83	84.184	ENSNGAG00000006480	-	78	82.412	Nannospalax_galili
ENSODEG00000013217	-	83	88.413	ENSNLEG00000012307	RBM28	76	88.413	Nomascus_leucogenys
ENSODEG00000013217	-	73	73.171	ENSMEUG00000009611	RBM28	75	69.403	Notamacropus_eugenii
ENSODEG00000013217	-	72	90.291	ENSOPRG00000015140	RBM28	66	90.291	Ochotona_princeps
ENSODEG00000013217	-	79	58.038	ENSONIG00000014924	rbm28	73	58.038	Oreochromis_niloticus
ENSODEG00000013217	-	83	66.253	ENSOANG00000000815	-	74	66.842	Ornithorhynchus_anatinus
ENSODEG00000013217	-	84	84.962	ENSOCUG00000003009	RBM28	75	84.962	Oryctolagus_cuniculus
ENSODEG00000013217	-	82	57.326	ENSORLG00000009636	rbm28	72	58.152	Oryzias_latipes
ENSODEG00000013217	-	82	57.326	ENSORLG00020002123	rbm28	73	58.152	Oryzias_latipes_hni
ENSODEG00000013217	-	81	57.552	ENSORLG00015015030	rbm28	84	56.614	Oryzias_latipes_hsok
ENSODEG00000013217	-	83	58.000	ENSOMEG00000007801	rbm28	80	56.965	Oryzias_melastigma
ENSODEG00000013217	-	68	87.186	ENSOGAG00000006011	RBM28	72	87.186	Otolemur_garnettii
ENSODEG00000013217	-	82	85.492	ENSOARG00000002547	RBM28	77	84.635	Ovis_aries
ENSODEG00000013217	-	83	87.909	ENSPPAG00000041730	RBM28	76	87.909	Pan_paniscus
ENSODEG00000013217	-	99	68.571	ENSPPRG00000004420	RBM28	93	69.714	Panthera_pardus
ENSODEG00000013217	-	99	69.000	ENSPTIG00000008550	RBM28	94	69.757	Panthera_tigris_altaica
ENSODEG00000013217	-	83	88.413	ENSPTRG00000019659	RBM28	76	88.413	Pan_troglodytes
ENSODEG00000013217	-	83	88.917	ENSPANG00000022295	RBM28	76	88.917	Papio_anubis
ENSODEG00000013217	-	80	54.067	ENSPKIG00000023453	rbm28	76	55.257	Paramormyrops_kingsleyae
ENSODEG00000013217	-	76	57.637	ENSPMGG00000012840	rbm28	91	46.708	Periophthalmus_magnuspinnatus
ENSODEG00000013217	-	84	84.887	ENSPEMG00000020673	Rbm28	80	84.887	Peromyscus_maniculatus_bairdii
ENSODEG00000013217	-	82	77.461	ENSPCIG00000012810	RBM28	82	73.412	Phascolarctos_cinereus
ENSODEG00000013217	-	82	57.179	ENSPFOG00000018209	rbm28	75	55.443	Poecilia_formosa
ENSODEG00000013217	-	82	57.614	ENSPLAG00000016078	rbm28	73	55.890	Poecilia_latipinna
ENSODEG00000013217	-	82	57.614	ENSPMEG00000004292	rbm28	80	55.890	Poecilia_mexicana
ENSODEG00000013217	-	82	56.853	ENSPREG00000014287	rbm28	76	55.362	Poecilia_reticulata
ENSODEG00000013217	-	83	88.161	ENSPPYG00000017975	RBM28	76	88.161	Pongo_abelii
ENSODEG00000013217	-	72	72.753	ENSPCAG00000008223	RBM28	75	72.652	Procavia_capensis
ENSODEG00000013217	-	84	87.186	ENSPCOG00000016797	RBM28	75	87.186	Propithecus_coquereli
ENSODEG00000013217	-	72	95.146	ENSPVAG00000005443	RBM28	66	95.146	Pteropus_vampyrus
ENSODEG00000013217	-	79	56.952	ENSPNYG00000014003	rbm28	72	58.400	Pundamilia_nyererei
ENSODEG00000013217	-	87	81.368	ENSRNOG00000005468	Rbm28	80	81.368	Rattus_norvegicus
ENSODEG00000013217	-	83	88.917	ENSRBIG00000033990	RBM28	76	88.917	Rhinopithecus_bieti
ENSODEG00000013217	-	83	88.917	ENSRROG00000040747	RBM28	76	88.917	Rhinopithecus_roxellana
ENSODEG00000013217	-	70	93.333	ENSSBOG00000012308	RBM28	75	93.333	Saimiri_boliviensis_boliviensis
ENSODEG00000013217	-	81	73.872	ENSSHAG00000017017	RBM28	75	73.515	Sarcophilus_harrisii
ENSODEG00000013217	-	80	60.000	ENSSFOG00015001231	rbm28	74	61.202	Scleropages_formosus
ENSODEG00000013217	-	56	54.569	ENSSMAG00000003885	rbm28	76	54.717	Scophthalmus_maximus
ENSODEG00000013217	-	58	57.035	ENSSDUG00000014270	rbm28	77	56.642	Seriola_dumerili
ENSODEG00000013217	-	83	57.035	ENSSLDG00000020099	rbm28	74	57.000	Seriola_lalandi_dorsalis
ENSODEG00000013217	-	83	84.051	ENSSARG00000008303	RBM28	80	84.051	Sorex_araneus
ENSODEG00000013217	-	63	77.778	ENSSPUG00000000838	RBM28	75	77.778	Sphenodon_punctatus
ENSODEG00000013217	-	70	56.712	ENSSPAG00000023305	rbm28	68	56.720	Stegastes_partitus
ENSODEG00000013217	-	82	88.114	ENSSSCG00000031847	RBM28	80	83.099	Sus_scrofa
ENSODEG00000013217	-	83	55.528	ENSTRUG00000013311	rbm28	71	56.417	Takifugu_rubripes
ENSODEG00000013217	-	99	46.933	ENSTNIG00000017962	rbm28	89	47.181	Tetraodon_nigroviridis
ENSODEG00000013217	-	69	86.269	ENSTBEG00000012749	RBM28	64	86.269	Tupaia_belangeri
ENSODEG00000013217	-	84	84.289	ENSTTRG00000013647	RBM28	77	84.539	Tursiops_truncatus
ENSODEG00000013217	-	87	74.126	ENSUAMG00000006949	RBM28	80	73.041	Ursus_americanus
ENSODEG00000013217	-	83	87.848	ENSUMAG00000005997	RBM28	76	87.848	Ursus_maritimus
ENSODEG00000013217	-	69	79.032	ENSVPAG00000008304	RBM28	61	83.051	Vicugna_pacos
ENSODEG00000013217	-	83	87.909	ENSVVUG00000007270	RBM28	77	87.909	Vulpes_vulpes
ENSODEG00000013217	-	79	61.214	ENSXETG00000009271	rbm28	90	49.148	Xenopus_tropicalis
ENSODEG00000013217	-	58	54.220	ENSXCOG00000020357	rbm28	81	52.551	Xiphophorus_couchianus
ENSODEG00000013217	-	81	57.254	ENSXMAG00000004415	rbm28	90	46.345	Xiphophorus_maculatus