EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013228 (Gene tree)
Gene ID: 101560499
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3116 bases
Position: chrJH651608.1:6894991-6898106
Accession: 101560499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017944	zf-U11-48K	PF05253.12	8.3e-16	1	2
ENSODEP00000017944	zf-U11-48K	PF05253.12	8.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018171	-	450	XM_012516141	ENSODEP00000017944	150 (aa)	XP_012371595	-

Gene Model

Click here to download ENSODEG00000013228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013228	-	98	69.388	ENSAMEG00000000958	-	90	71.533	Ailuropoda_melanoleuca
ENSODEG00000013228	-	98	69.388	ENSCAFG00000006463	-	89	71.014	Canis_familiaris
ENSODEG00000013228	-	98	69.388	ENSCAFG00020020371	-	87	71.014	Canis_lupus_dingo
ENSODEG00000013228	-	100	78.000	ENSCPOG00000023851	-	99	78.000	Cavia_porcellus
ENSODEG00000013228	-	98	81.633	ENSCLAG00000008579	-	94	84.783	Chinchilla_lanigera
ENSODEG00000013228	-	98	63.265	ENSCGRG00001016136	Gtsf2	90	64.748	Cricetulus_griseus_chok1gshd
ENSODEG00000013228	-	98	63.265	ENSCGRG00000012950	Gtsf2	90	64.748	Cricetulus_griseus_crigri
ENSODEG00000013228	-	98	67.347	ENSDORG00000026087	Gtsf2	88	68.889	Dipodomys_ordii
ENSODEG00000013228	-	71	65.421	ENSEASG00005010262	-	97	66.038	Equus_asinus_asinus
ENSODEG00000013228	-	71	71.698	ENSECAG00000014413	-	98	71.698	Equus_caballus
ENSODEG00000013228	-	71	73.585	ENSFCAG00000031316	-	91	73.585	Felis_catus
ENSODEG00000013228	-	100	75.333	ENSFDAG00000019555	-	93	77.698	Fukomys_damarensis
ENSODEG00000013228	-	95	76.224	ENSHGLG00000002798	-	97	76.000	Heterocephalus_glaber_female
ENSODEG00000013228	-	95	76.224	ENSHGLG00100012359	-	97	76.000	Heterocephalus_glaber_male
ENSODEG00000013228	-	98	69.388	ENSSTOG00000030158	-	91	70.803	Ictidomys_tridecemlineatus
ENSODEG00000013228	-	98	64.626	ENSJJAG00000016320	Gtsf2	87	65.672	Jaculus_jaculus
ENSODEG00000013228	-	98	62.585	ENSMAUG00000017189	-	85	64.964	Mesocricetus_auratus
ENSODEG00000013228	-	56	69.048	ENSMAUG00000014687	-	92	69.048	Mesocricetus_auratus
ENSODEG00000013228	-	89	66.418	ENSMOCG00000014770	Gtsf2	88	66.418	Microtus_ochrogaster
ENSODEG00000013228	-	98	63.265	MGP_CAROLIEiJ_G0020380	Gtsf2	87	65.672	Mus_caroli
ENSODEG00000013228	-	98	63.946	ENSMUSG00000053508	Gtsf2	87	66.418	Mus_musculus
ENSODEG00000013228	-	98	63.265	MGP_PahariEiJ_G0020379	Gtsf2	87	65.672	Mus_pahari
ENSODEG00000013228	-	98	63.946	MGP_SPRETEiJ_G0021273	Gtsf2	87	66.418	Mus_spretus
ENSODEG00000013228	-	98	70.748	ENSMPUG00000005664	-	89	72.464	Mustela_putorius_furo
ENSODEG00000013228	-	98	61.905	ENSNGAG00000008752	Gtsf2	90	62.590	Nannospalax_galili
ENSODEG00000013228	-	85	73.228	ENSPPRG00000004157	-	99	73.228	Panthera_pardus
ENSODEG00000013228	-	85	73.228	ENSPTIG00000020670	-	99	73.228	Panthera_tigris_altaica
ENSODEG00000013228	-	98	64.626	ENSPEMG00000010828	-	89	67.153	Peromyscus_maniculatus_bairdii
ENSODEG00000013228	-	89	62.687	ENSPEMG00000014641	-	96	62.037	Peromyscus_maniculatus_bairdii
ENSODEG00000013228	-	98	64.626	ENSRNOG00000036830	RGD1563200	87	67.164	Rattus_norvegicus
ENSODEG00000013228	-	98	55.102	ENSSSCG00000000296	-	82	55.797	Sus_scrofa
ENSODEG00000013228	-	70	76.190	ENSUAMG00000021668	-	96	76.190	Ursus_americanus
ENSODEG00000013228	-	70	76.190	ENSUMAG00000011281	-	96	76.190	Ursus_maritimus
ENSODEG00000013228	-	69	76.923	ENSVVUG00000023684	-	95	76.923	Vulpes_vulpes