EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013230 (Gene tree)
Gene ID: 101574370
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 6320 bases
Position: chrJH651565.1:6113433-6119752
Accession: 101574370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000017946	RNA_pol_Rpb5_N	PF03871.14	7.8e-35	1	1
ENSODEP00000017946	RNA_pol_Rpb5_C	PF01191.19	6.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018173	-	663	XM_004632666	ENSODEP00000017946	210 (aa)	XP_004632723	UPI000015B7BA

Gene Model

Click here to download ENSODEG00000013230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013230	-	100	72.381	ENSODEG00000011490	-	100	72.381
ENSODEG00000013230	-	89	88.710	ENSODEG00000007985	-	100	88.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013230	-	100	99.524	ENSG00000099817	POLR2E	100	99.524	Homo_sapiens
ENSODEG00000013230	-	100	95.714	ENSAPOG00000002935	polr2eb	100	95.714	Acanthochromis_polyacanthus
ENSODEG00000013230	-	100	100.000	ENSAMEG00000003159	POLR2E	100	100.000	Ailuropoda_melanoleuca
ENSODEG00000013230	-	100	83.333	ENSACIG00000024371	polr2eb	100	83.333	Amphilophus_citrinellus
ENSODEG00000013230	-	100	95.714	ENSAOCG00000018166	polr2eb	100	95.714	Amphiprion_ocellaris
ENSODEG00000013230	-	100	95.714	ENSAPEG00000009000	polr2eb	100	95.714	Amphiprion_percula
ENSODEG00000013230	-	100	95.714	ENSATEG00000023760	polr2eb	100	95.714	Anabas_testudineus
ENSODEG00000013230	-	100	100.000	ENSANAG00000038488	POLR2E	100	100.000	Aotus_nancymaae
ENSODEG00000013230	-	100	96.190	ENSACLG00000005254	polr2eb	100	96.190	Astatotilapia_calliptera
ENSODEG00000013230	-	100	96.190	ENSAMXG00000018915	POLR2E	100	96.190	Astyanax_mexicanus
ENSODEG00000013230	-	100	100.000	ENSBTAG00000020776	POLR2E	100	100.000	Bos_taurus
ENSODEG00000013230	-	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
ENSODEG00000013230	-	67	95.714	ENSCJAG00000007666	-	77	95.714	Callithrix_jacchus
ENSODEG00000013230	-	100	96.667	ENSCAFG00000019546	POLR2E	100	96.667	Canis_familiaris
ENSODEG00000013230	-	100	100.000	ENSCAFG00020017111	POLR2E	100	100.000	Canis_lupus_dingo
ENSODEG00000013230	-	100	100.000	ENSCHIG00000014151	POLR2E	100	100.000	Capra_hircus
ENSODEG00000013230	-	100	81.395	ENSTSYG00000026377	POLR2E	100	81.395	Carlito_syrichta
ENSODEG00000013230	-	91	100.000	ENSCAPG00000010843	POLR2E	93	100.000	Cavia_aperea
ENSODEG00000013230	-	100	100.000	ENSCPOG00000001542	POLR2E	100	100.000	Cavia_porcellus
ENSODEG00000013230	-	100	100.000	ENSCCAG00000025658	POLR2E	100	100.000	Cebus_capucinus
ENSODEG00000013230	-	100	100.000	ENSCATG00000008926	POLR2E	100	100.000	Cercocebus_atys
ENSODEG00000013230	-	98	76.585	ENSCLAG00000009238	-	100	76.585	Chinchilla_lanigera
ENSODEG00000013230	-	100	99.524	ENSCLAG00000014874	-	100	99.524	Chinchilla_lanigera
ENSODEG00000013230	-	100	100.000	ENSCSAG00000012336	POLR2E	100	100.000	Chlorocebus_sabaeus
ENSODEG00000013230	-	100	99.524	ENSCPBG00000009702	POLR2E	100	99.524	Chrysemys_picta_bellii
ENSODEG00000013230	-	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSODEG00000013230	-	100	100.000	ENSCANG00000025560	POLR2E	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000013230	-	100	99.048	ENSCGRG00001022927	Polr2e	100	99.048	Cricetulus_griseus_chok1gshd
ENSODEG00000013230	-	100	92.558	ENSCGRG00000016441	Polr2e	100	92.558	Cricetulus_griseus_crigri
ENSODEG00000013230	-	100	94.762	ENSCSEG00000007107	polr2eb	92	94.762	Cynoglossus_semilaevis
ENSODEG00000013230	-	100	95.714	ENSCVAG00000019940	polr2eb	100	95.714	Cyprinodon_variegatus
ENSODEG00000013230	-	100	94.762	ENSDARG00000026183	polr2eb	100	94.762	Danio_rerio
ENSODEG00000013230	-	90	100.000	ENSDNOG00000044994	POLR2E	84	100.000	Dasypus_novemcinctus
ENSODEG00000013230	-	100	100.000	ENSDORG00000001154	Polr2e	100	100.000	Dipodomys_ordii
ENSODEG00000013230	-	99	85.646	FBgn0033571	Rpb5	99	85.646	Drosophila_melanogaster
ENSODEG00000013230	-	75	91.720	ENSEBUG00000010159	-	76	91.720	Eptatretus_burgeri
ENSODEG00000013230	-	69	93.793	ENSEASG00005021615	POLR2E	67	87.654	Equus_asinus_asinus
ENSODEG00000013230	-	91	98.953	ENSECAG00000011124	POLR2E	100	87.143	Equus_caballus
ENSODEG00000013230	-	100	93.333	ENSELUG00000020646	polr2e	100	93.333	Esox_lucius
ENSODEG00000013230	-	100	94.286	ENSELUG00000005815	POLR2E	100	94.286	Esox_lucius
ENSODEG00000013230	-	100	99.524	ENSFCAG00000007318	POLR2E	100	99.524	Felis_catus
ENSODEG00000013230	-	91	99.479	ENSFALG00000013986	POLR2E	99	99.479	Ficedula_albicollis
ENSODEG00000013230	-	100	100.000	ENSFDAG00000014539	POLR2E	100	100.000	Fukomys_damarensis
ENSODEG00000013230	-	100	95.714	ENSFHEG00000022398	polr2eb	100	95.714	Fundulus_heteroclitus
ENSODEG00000013230	-	100	94.286	ENSGMOG00000007615	polr2eb	100	94.286	Gadus_morhua
ENSODEG00000013230	-	100	99.524	ENSGALG00000002591	POLR2E	100	99.524	Gallus_gallus
ENSODEG00000013230	-	100	96.190	ENSGAFG00000005087	polr2eb	100	96.190	Gambusia_affinis
ENSODEG00000013230	-	100	94.286	ENSGACG00000013247	polr2eb	100	94.286	Gasterosteus_aculeatus
ENSODEG00000013230	-	100	99.524	ENSGAGG00000008356	POLR2E	100	99.524	Gopherus_agassizii
ENSODEG00000013230	-	100	100.000	ENSGGOG00000011267	POLR2E	100	100.000	Gorilla_gorilla
ENSODEG00000013230	-	68	90.141	ENSHBUG00000011099	polr2eb	100	90.141	Haplochromis_burtoni
ENSODEG00000013230	-	100	99.048	ENSHGLG00000013330	POLR2E	100	99.048	Heterocephalus_glaber_female
ENSODEG00000013230	-	100	99.048	ENSHGLG00100011014	POLR2E	100	99.048	Heterocephalus_glaber_male
ENSODEG00000013230	-	100	94.286	ENSHCOG00000000906	polr2eb	100	94.286	Hippocampus_comes
ENSODEG00000013230	-	53	91.964	ENSHCOG00000012099	-	88	91.964	Hippocampus_comes
ENSODEG00000013230	-	100	95.714	ENSIPUG00000019801	polr2e	100	95.714	Ictalurus_punctatus
ENSODEG00000013230	-	100	100.000	ENSSTOG00000002853	POLR2E	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000013230	-	77	81.366	ENSJJAG00000015812	-	100	81.366	Jaculus_jaculus
ENSODEG00000013230	-	100	80.000	ENSJJAG00000003145	-	100	80.000	Jaculus_jaculus
ENSODEG00000013230	-	100	99.048	ENSJJAG00000016595	-	100	99.048	Jaculus_jaculus
ENSODEG00000013230	-	100	95.714	ENSKMAG00000005954	polr2eb	100	95.714	Kryptolebias_marmoratus
ENSODEG00000013230	-	100	95.714	ENSLBEG00000024802	polr2eb	100	95.714	Labrus_bergylta
ENSODEG00000013230	-	100	95.714	ENSLACG00000013686	POLR2E	100	95.714	Latimeria_chalumnae
ENSODEG00000013230	-	77	96.914	ENSLOCG00000004599	POLR2E	100	96.914	Lepisosteus_oculatus
ENSODEG00000013230	-	100	80.189	ENSLAFG00000025587	POLR2E	100	80.189	Loxodonta_africana
ENSODEG00000013230	-	100	100.000	ENSMFAG00000002884	POLR2E	100	100.000	Macaca_fascicularis
ENSODEG00000013230	-	100	100.000	ENSMMUG00000013927	POLR2E	100	100.000	Macaca_mulatta
ENSODEG00000013230	-	100	66.351	ENSMNEG00000033452	-	100	66.351	Macaca_nemestrina
ENSODEG00000013230	-	100	100.000	ENSMNEG00000034046	-	100	100.000	Macaca_nemestrina
ENSODEG00000013230	-	92	81.347	ENSMLEG00000012405	POLR2E	94	81.347	Mandrillus_leucophaeus
ENSODEG00000013230	-	100	95.714	ENSMAMG00000018703	polr2eb	100	95.714	Mastacembelus_armatus
ENSODEG00000013230	-	90	95.789	ENSMZEG00005010796	polr2eb	96	95.789	Maylandia_zebra
ENSODEG00000013230	-	100	98.104	ENSMGAG00000003769	POLR2E	100	98.104	Meleagris_gallopavo
ENSODEG00000013230	-	100	67.619	ENSMAUG00000011003	-	100	67.619	Mesocricetus_auratus
ENSODEG00000013230	-	92	98.446	ENSMAUG00000010125	-	100	98.953	Mesocricetus_auratus
ENSODEG00000013230	-	100	100.000	ENSMICG00000013063	POLR2E	100	100.000	Microcebus_murinus
ENSODEG00000013230	-	100	99.048	ENSMOCG00000013414	Polr2e	100	99.048	Microtus_ochrogaster
ENSODEG00000013230	-	100	81.429	ENSMMOG00000001161	polr2eb	100	81.429	Mola_mola
ENSODEG00000013230	-	91	86.387	ENSMMOG00000001167	polr2eb	88	86.387	Mola_mola
ENSODEG00000013230	-	100	99.524	ENSMODG00000005494	POLR2E	100	99.524	Monodelphis_domestica
ENSODEG00000013230	-	100	96.190	ENSMALG00000021888	polr2eb	100	96.190	Monopterus_albus
ENSODEG00000013230	-	100	99.048	MGP_CAROLIEiJ_G0015561	Polr2e	100	99.048	Mus_caroli
ENSODEG00000013230	-	100	99.048	ENSMUSG00000004667	Polr2e	100	99.048	Mus_musculus
ENSODEG00000013230	-	100	99.048	MGP_PahariEiJ_G0030974	Polr2e	100	99.048	Mus_pahari
ENSODEG00000013230	-	100	99.048	MGP_SPRETEiJ_G0016379	Polr2e	100	99.048	Mus_spretus
ENSODEG00000013230	-	100	99.048	ENSMPUG00000008953	POLR2E	100	99.048	Mustela_putorius_furo
ENSODEG00000013230	-	100	100.000	ENSMLUG00000013193	POLR2E	100	100.000	Myotis_lucifugus
ENSODEG00000013230	-	66	94.203	ENSMLUG00000006376	-	100	82.716	Myotis_lucifugus
ENSODEG00000013230	-	85	74.302	ENSNGAG00000017344	-	96	74.302	Nannospalax_galili
ENSODEG00000013230	-	100	99.048	ENSNGAG00000001147	Polr2e	100	99.048	Nannospalax_galili
ENSODEG00000013230	-	100	83.333	ENSNBRG00000022772	polr2eb	100	83.333	Neolamprologus_brichardi
ENSODEG00000013230	-	100	96.209	ENSNLEG00000001207	-	100	96.209	Nomascus_leucogenys
ENSODEG00000013230	-	100	76.190	ENSNLEG00000031364	-	100	76.190	Nomascus_leucogenys
ENSODEG00000013230	-	100	87.143	ENSOPRG00000008331	POLR2E	100	87.143	Ochotona_princeps
ENSODEG00000013230	-	100	95.714	ENSONIG00000002519	polr2eb	100	95.714	Oreochromis_niloticus
ENSODEG00000013230	-	100	96.190	ENSORLG00000015346	polr2eb	100	96.190	Oryzias_latipes
ENSODEG00000013230	-	100	96.190	ENSORLG00020020700	polr2e	100	96.190	Oryzias_latipes_hni
ENSODEG00000013230	-	100	96.190	ENSORLG00015016842	polr2e	100	96.190	Oryzias_latipes_hsok
ENSODEG00000013230	-	100	95.714	ENSOMEG00000002709	polr2eb	100	95.714	Oryzias_melastigma
ENSODEG00000013230	-	100	100.000	ENSOGAG00000012311	POLR2E	100	100.000	Otolemur_garnettii
ENSODEG00000013230	-	100	100.000	ENSOARG00000010994	POLR2E	100	100.000	Ovis_aries
ENSODEG00000013230	-	91	100.000	ENSPPAG00000003145	POLR2E	100	100.000	Pan_paniscus
ENSODEG00000013230	-	100	99.524	ENSPPRG00000000777	POLR2E	100	99.524	Panthera_pardus
ENSODEG00000013230	-	91	77.604	ENSPTIG00000012237	POLR2E	98	94.079	Panthera_tigris_altaica
ENSODEG00000013230	-	100	100.000	ENSPTRG00000010183	POLR2E	100	100.000	Pan_troglodytes
ENSODEG00000013230	-	100	100.000	ENSPANG00000018011	POLR2E	100	100.000	Papio_anubis
ENSODEG00000013230	-	100	94.762	ENSPKIG00000024123	POLR2E	100	94.762	Paramormyrops_kingsleyae
ENSODEG00000013230	-	100	94.762	ENSPKIG00000009607	POLR2E	100	94.762	Paramormyrops_kingsleyae
ENSODEG00000013230	-	98	95.610	ENSPSIG00000002870	POLR2E	99	95.610	Pelodiscus_sinensis
ENSODEG00000013230	-	100	82.857	ENSPMGG00000014354	polr2eb	100	82.857	Periophthalmus_magnuspinnatus
ENSODEG00000013230	-	100	99.048	ENSPEMG00000023261	Polr2e	100	99.048	Peromyscus_maniculatus_bairdii
ENSODEG00000013230	-	90	99.471	ENSPCIG00000007312	POLR2E	75	99.471	Phascolarctos_cinereus
ENSODEG00000013230	-	100	96.190	ENSPFOG00000005734	polr2eb	100	96.190	Poecilia_formosa
ENSODEG00000013230	-	100	96.190	ENSPLAG00000014496	polr2eb	100	96.190	Poecilia_latipinna
ENSODEG00000013230	-	100	96.190	ENSPMEG00000008053	polr2eb	100	96.190	Poecilia_mexicana
ENSODEG00000013230	-	100	96.190	ENSPREG00000006489	polr2eb	100	96.190	Poecilia_reticulata
ENSODEG00000013230	-	100	92.417	ENSPPYG00000009305	POLR2E	100	92.417	Pongo_abelii
ENSODEG00000013230	-	53	100.000	ENSPCAG00000016605	POLR2E	100	100.000	Procavia_capensis
ENSODEG00000013230	-	100	100.000	ENSPCOG00000014491	POLR2E	100	100.000	Propithecus_coquereli
ENSODEG00000013230	-	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSODEG00000013230	-	90	95.789	ENSPNYG00000019797	polr2eb	96	95.789	Pundamilia_nyererei
ENSODEG00000013230	-	100	95.714	ENSPNAG00000026263	POLR2E	100	95.714	Pygocentrus_nattereri
ENSODEG00000013230	-	100	99.048	ENSRNOG00000013545	Polr2e	100	99.048	Rattus_norvegicus
ENSODEG00000013230	-	100	100.000	ENSRBIG00000028726	-	100	100.000	Rhinopithecus_bieti
ENSODEG00000013230	-	100	73.934	ENSRBIG00000027259	-	100	73.934	Rhinopithecus_bieti
ENSODEG00000013230	-	100	100.000	ENSRROG00000043763	POLR2E	100	100.000	Rhinopithecus_roxellana
ENSODEG00000013230	-	99	43.578	YBR154C	RPB5	98	43.578	Saccharomyces_cerevisiae
ENSODEG00000013230	-	100	100.000	ENSSBOG00000027241	POLR2E	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000013230	-	100	99.524	ENSSHAG00000010690	POLR2E	100	99.524	Sarcophilus_harrisii
ENSODEG00000013230	-	100	95.714	ENSSFOG00015006073	polr2e	100	95.714	Scleropages_formosus
ENSODEG00000013230	-	100	95.714	ENSSMAG00000012782	polr2eb	100	95.714	Scophthalmus_maximus
ENSODEG00000013230	-	100	95.714	ENSSDUG00000003352	polr2eb	100	95.714	Seriola_dumerili
ENSODEG00000013230	-	100	95.714	ENSSLDG00000004965	polr2eb	100	95.714	Seriola_lalandi_dorsalis
ENSODEG00000013230	-	100	98.095	ENSSPUG00000006114	POLR2E	100	98.095	Sphenodon_punctatus
ENSODEG00000013230	-	100	95.714	ENSSPAG00000017556	polr2eb	100	95.714	Stegastes_partitus
ENSODEG00000013230	-	100	100.000	ENSSSCG00000021472	POLR2E	100	100.000	Sus_scrofa
ENSODEG00000013230	-	66	90.000	ENSTGUG00000000922	POLR2E	99	90.000	Taeniopygia_guttata
ENSODEG00000013230	-	96	91.045	ENSTRUG00000018238	polr2eb	100	82.857	Takifugu_rubripes
ENSODEG00000013230	-	100	95.714	ENSTNIG00000013187	polr2eb	100	95.714	Tetraodon_nigroviridis
ENSODEG00000013230	-	100	99.524	ENSTTRG00000001484	POLR2E	100	99.524	Tursiops_truncatus
ENSODEG00000013230	-	92	96.907	ENSUAMG00000009166	POLR2E	100	86.667	Ursus_americanus
ENSODEG00000013230	-	100	100.000	ENSVVUG00000022818	POLR2E	54	100.000	Vulpes_vulpes
ENSODEG00000013230	-	100	97.619	ENSXETG00000003291	polr2e	100	97.619	Xenopus_tropicalis
ENSODEG00000013230	-	100	83.333	ENSXCOG00000009197	polr2eb	100	83.333	Xiphophorus_couchianus
ENSODEG00000013230	-	100	96.190	ENSXMAG00000026495	polr2eb	100	96.190	Xiphophorus_maculatus