EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 574 bases
Position: chrJH651565.1:5849539-5850112
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018015	Ribosomal_S13_N	PF08069.12	3.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018244	-	198	-	ENSODEP00000018015	65 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013281	-	78	98.039	ENSODEG00000009111	-	78	98.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013281	-	94	88.525	ENSG00000110700	RPS13	53	88.525	Homo_sapiens
ENSODEG00000013281	-	80	100.000	ENSANAG00000036937	-	91	100.000	Aotus_nancymaae
ENSODEG00000013281	-	74	87.755	ENSANAG00000026759	-	56	87.755	Aotus_nancymaae
ENSODEG00000013281	-	80	90.385	ENSANAG00000020722	-	76	90.385	Aotus_nancymaae
ENSODEG00000013281	-	80	98.077	ENSANAG00000021096	-	84	98.077	Aotus_nancymaae
ENSODEG00000013281	-	83	66.667	ENSBTAG00000051548	-	83	66.667	Bos_taurus
ENSODEG00000013281	-	77	80.000	ENSBTAG00000048733	-	71	80.000	Bos_taurus
ENSODEG00000013281	-	80	100.000	ENSCJAG00000040263	-	87	100.000	Callithrix_jacchus
ENSODEG00000013281	-	77	96.000	ENSCJAG00000041854	-	53	96.000	Callithrix_jacchus
ENSODEG00000013281	-	78	100.000	ENSCAFG00020017408	-	73	100.000	Canis_lupus_dingo
ENSODEG00000013281	-	82	100.000	ENSCAFG00020008093	-	84	100.000	Canis_lupus_dingo
ENSODEG00000013281	-	80	98.077	ENSTSYG00000027850	-	93	98.077	Carlito_syrichta
ENSODEG00000013281	-	78	96.078	ENSTSYG00000031341	-	65	96.078	Carlito_syrichta
ENSODEG00000013281	-	88	89.474	ENSCCAG00000013724	-	78	89.474	Cebus_capucinus
ENSODEG00000013281	-	94	85.246	ENSCCAG00000023780	-	88	85.246	Cebus_capucinus
ENSODEG00000013281	-	85	87.273	ENSCCAG00000034587	-	63	87.273	Cebus_capucinus
ENSODEG00000013281	-	80	100.000	ENSCATG00000030945	-	78	100.000	Cercocebus_atys
ENSODEG00000013281	-	92	90.000	ENSCANG00000034314	-	76	90.000	Colobus_angolensis_palliatus
ENSODEG00000013281	-	78	100.000	ENSCANG00000030440	-	75	100.000	Colobus_angolensis_palliatus
ENSODEG00000013281	-	77	100.000	ENSCANG00000026834	-	86	100.000	Colobus_angolensis_palliatus
ENSODEG00000013281	-	94	74.194	ENSCANG00000040544	-	79	74.194	Colobus_angolensis_palliatus
ENSODEG00000013281	-	82	83.019	ENSCANG00000029830	-	79	83.019	Colobus_angolensis_palliatus
ENSODEG00000013281	-	78	76.471	ENSEASG00005009882	-	73	76.471	Equus_asinus_asinus
ENSODEG00000013281	-	78	76.471	ENSECAG00000034044	-	76	76.471	Equus_caballus
ENSODEG00000013281	-	83	61.111	ENSFCAG00000024804	-	92	63.462	Felis_catus
ENSODEG00000013281	-	100	76.923	ENSFCAG00000034313	-	88	76.923	Felis_catus
ENSODEG00000013281	-	89	85.938	ENSGGOG00000039792	-	94	85.938	Gorilla_gorilla
ENSODEG00000013281	-	94	80.328	ENSGGOG00000038008	-	81	80.328	Gorilla_gorilla
ENSODEG00000013281	-	83	92.593	ENSMFAG00000031871	-	64	96.078	Macaca_fascicularis
ENSODEG00000013281	-	83	88.889	ENSMFAG00000036526	-	73	92.157	Macaca_fascicularis
ENSODEG00000013281	-	80	96.154	ENSMFAG00000034277	-	100	96.154	Macaca_fascicularis
ENSODEG00000013281	-	78	100.000	ENSMFAG00000032920	-	93	100.000	Macaca_fascicularis
ENSODEG00000013281	-	78	100.000	ENSMNEG00000036505	-	93	100.000	Macaca_nemestrina
ENSODEG00000013281	-	83	81.481	ENSMNEG00000039930	-	61	84.314	Macaca_nemestrina
ENSODEG00000013281	-	83	96.296	ENSMNEG00000032920	-	100	98.077	Macaca_nemestrina
ENSODEG00000013281	-	83	75.926	ENSMLEG00000038639	-	71	78.431	Mandrillus_leucophaeus
ENSODEG00000013281	-	77	84.000	ENSMICG00000047790	-	59	84.000	Microcebus_murinus
ENSODEG00000013281	-	83	81.818	ENSMICG00000028980	-	93	81.818	Microcebus_murinus
ENSODEG00000013281	-	83	96.296	MGP_CAROLIEiJ_G0030356	Rps13	96	100.000	Mus_caroli
ENSODEG00000013281	-	83	96.296	ENSMUSG00000090862	Rps13	96	100.000	Mus_musculus
ENSODEG00000013281	-	83	96.296	MGP_PahariEiJ_G0013567	Rps13	96	100.000	Mus_pahari
ENSODEG00000013281	-	83	96.296	MGP_SPRETEiJ_G0031471	Rps13	96	100.000	Mus_spretus
ENSODEG00000013281	-	89	87.500	ENSPPAG00000043780	-	94	87.500	Pan_paniscus
ENSODEG00000013281	-	80	86.538	ENSPPAG00000034401	-	100	86.538	Pan_paniscus
ENSODEG00000013281	-	78	88.235	ENSPPRG00000011782	-	100	88.235	Panthera_pardus
ENSODEG00000013281	-	100	73.846	ENSPPRG00000024823	-	88	73.846	Panthera_pardus
ENSODEG00000013281	-	100	58.462	ENSPPRG00000006929	-	100	69.231	Panthera_pardus
ENSODEG00000013281	-	74	83.333	ENSPPRG00000016154	-	100	83.333	Panthera_pardus
ENSODEG00000013281	-	89	87.500	ENSPTRG00000051948	-	94	87.500	Pan_troglodytes
ENSODEG00000013281	-	78	80.392	ENSPTRG00000003397	-	96	80.392	Pan_troglodytes
ENSODEG00000013281	-	80	86.538	ENSPTRG00000043753	-	100	86.538	Pan_troglodytes
ENSODEG00000013281	-	78	100.000	ENSPANG00000030775	-	50	100.000	Papio_anubis
ENSODEG00000013281	-	80	94.231	ENSPEMG00000004910	-	96	94.231	Peromyscus_maniculatus_bairdii
ENSODEG00000013281	-	83	81.481	ENSPCIG00000010367	-	86	81.481	Phascolarctos_cinereus
ENSODEG00000013281	-	82	77.358	ENSPCIG00000020409	-	100	77.358	Phascolarctos_cinereus
ENSODEG00000013281	-	77	90.000	ENSPCIG00000025864	-	71	90.000	Phascolarctos_cinereus
ENSODEG00000013281	-	80	82.692	ENSPCOG00000024602	-	96	82.692	Propithecus_coquereli
ENSODEG00000013281	-	80	98.077	ENSRBIG00000029830	-	100	98.077	Rhinopithecus_bieti
ENSODEG00000013281	-	92	90.000	ENSRROG00000000388	-	83	90.000	Rhinopithecus_roxellana
ENSODEG00000013281	-	80	98.077	ENSRROG00000031911	-	100	98.077	Rhinopithecus_roxellana
ENSODEG00000013281	-	80	83.019	ENSSBOG00000022618	-	93	83.019	Saimiri_boliviensis_boliviensis
ENSODEG00000013281	-	83	75.926	ENSSBOG00000026914	-	100	75.926	Saimiri_boliviensis_boliviensis
ENSODEG00000013281	-	78	98.039	ENSSBOG00000025628	-	69	98.039	Saimiri_boliviensis_boliviensis
ENSODEG00000013281	-	75	83.673	ENSSSCG00000028308	-	66	88.636	Sus_scrofa
ENSODEG00000013281	-	78	98.039	ENSTGUG00000008572	-	100	98.039	Taeniopygia_guttata
ENSODEG00000013281	-	75	83.673	ENSUAMG00000026340	-	56	83.673	Ursus_americanus
ENSODEG00000013281	-	78	100.000	ENSVVUG00000024098	-	63	100.000	Vulpes_vulpes
ENSODEG00000013281	-	83	72.222	ENSVVUG00000023064	-	58	72.222	Vulpes_vulpes
ENSODEG00000013281	-	83	67.857	ENSXETG00000026454	rps13	51	67.857	Xenopus_tropicalis