EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013381 (Gene tree)
Gene ID: 111818459
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 33643 bases
Position: chrJH651607.1:1408811-1442453
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018154	PWI	PF01480.17	3.3e-26	1	1
ENSODEP00000018153	PWI	PF01480.17	3.3e-26	1	1
ENSODEP00000018155	PWI	PF01480.17	3.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018386	SRRM1-203	2523	-	ENSODEP00000018155	840 (aa)	-	-
ENSODET00000018384	SRRM1-201	2484	-	ENSODEP00000018153	827 (aa)	-	-
ENSODET00000018385	SRRM1-202	2457	-	ENSODEP00000018154	818 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013381	SRRM1	64	92.762	ENSCJAG00000020822	SRRM1	67	100.000	Callithrix_jacchus
ENSODEG00000013381	SRRM1	64	93.333	ENSCAFG00020020948	SRRM1	73	100.000	Canis_lupus_dingo
ENSODEG00000013381	SRRM1	61	100.000	ENSEEUG00000013830	SRRM1	54	100.000	Erinaceus_europaeus
ENSODEG00000013381	SRRM1	63	100.000	ENSMLEG00000038030	-	69	100.000	Mandrillus_leucophaeus
ENSODEG00000013381	SRRM1	67	96.552	ENSMEUG00000014704	SRRM1	54	96.552	Notamacropus_eugenii
ENSODEG00000013381	SRRM1	59	93.402	ENSPANG00000010194	SRRM1	68	100.000	Papio_anubis
ENSODEG00000013381	SRRM1	50	88.852	ENSSARG00000013718	SRRM1	61	98.630	Sorex_araneus
ENSODEG00000013381	SRRM1	66	87.614	ENSSSCG00000032947	SRRM1	66	100.000	Sus_scrofa