EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013411 (Gene tree)
Gene ID: 101567119
Gene Symbol: UTP20
Alias: -
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 80732 bases
Position: chrJH651519.1:29768928-29849659
Accession: 101567119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018199	DRIM	PF07539.12	4.9e-174	1	1
ENSODEP00000018197	DRIM	PF07539.12	1e-173	1	1
ENSODEP00000018198	DRIM	PF07539.12	6.8e-168	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018430	UTP20-203	8307	-	ENSODEP00000018199	2768 (aa)	-	-
ENSODET00000018429	UTP20-202	8310	-	ENSODEP00000018198	2769 (aa)	-	-
ENSODET00000018428	UTP20-201	8319	XM_004623841	ENSODEP00000018197	2772 (aa)	XP_004623898	UPI000333EB39

Gene Model

Click here to download ENSODEG00000013411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013411	UTP20	100	81.616	ENSG00000120800	UTP20	100	81.508	Homo_sapiens
ENSODEG00000013411	UTP20	100	55.417	ENSAPOG00000002429	utp20	100	55.611	Acanthochromis_polyacanthus
ENSODEG00000013411	UTP20	100	80.986	ENSAMEG00000016416	UTP20	100	80.986	Ailuropoda_melanoleuca
ENSODEG00000013411	UTP20	100	55.036	ENSACIG00000007987	utp20	100	55.238	Amphilophus_citrinellus
ENSODEG00000013411	UTP20	60	55.971	ENSAOCG00000015055	utp20	96	55.919	Amphiprion_ocellaris
ENSODEG00000013411	UTP20	100	55.394	ENSAPEG00000011605	utp20	100	55.880	Amphiprion_percula
ENSODEG00000013411	UTP20	98	54.397	ENSATEG00000005601	utp20	100	54.440	Anabas_testudineus
ENSODEG00000013411	UTP20	99	65.700	ENSAPLG00000015651	UTP20	100	65.951	Anas_platyrhynchos
ENSODEG00000013411	UTP20	100	65.667	ENSACAG00000011671	UTP20	100	65.868	Anolis_carolinensis
ENSODEG00000013411	UTP20	100	79.576	ENSANAG00000027152	UTP20	100	79.598	Aotus_nancymaae
ENSODEG00000013411	UTP20	95	59.698	ENSACLG00000008064	utp20	99	59.698	Astatotilapia_calliptera
ENSODEG00000013411	UTP20	100	55.115	ENSAMXG00000021039	utp20	99	55.410	Astyanax_mexicanus
ENSODEG00000013411	UTP20	100	80.654	ENSBTAG00000003239	UTP20	100	80.654	Bos_taurus
ENSODEG00000013411	UTP20	100	80.898	ENSCJAG00000001913	UTP20	100	80.918	Callithrix_jacchus
ENSODEG00000013411	UTP20	100	81.077	ENSCAFG00000006964	UTP20	100	81.077	Canis_familiaris
ENSODEG00000013411	UTP20	100	81.077	ENSCAFG00020024305	UTP20	100	81.077	Canis_lupus_dingo
ENSODEG00000013411	UTP20	100	80.826	ENSCHIG00000009221	UTP20	100	80.403	Capra_hircus
ENSODEG00000013411	UTP20	100	80.273	ENSTSYG00000003040	UTP20	100	80.366	Carlito_syrichta
ENSODEG00000013411	UTP20	99	80.310	ENSCAPG00000014920	UTP20	100	80.202	Cavia_aperea
ENSODEG00000013411	UTP20	100	83.448	ENSCPOG00000003129	UTP20	100	83.339	Cavia_porcellus
ENSODEG00000013411	UTP20	100	81.400	ENSCCAG00000031422	UTP20	100	81.400	Cebus_capucinus
ENSODEG00000013411	UTP20	100	78.548	ENSCATG00000035636	UTP20	100	78.477	Cercocebus_atys
ENSODEG00000013411	UTP20	100	88.312	ENSCLAG00000011569	UTP20	100	88.312	Chinchilla_lanigera
ENSODEG00000013411	UTP20	100	81.652	ENSCSAG00000003388	UTP20	100	81.580	Chlorocebus_sabaeus
ENSODEG00000013411	UTP20	92	95.455	ENSCHOG00000003532	UTP20	94	95.455	Choloepus_hoffmanni
ENSODEG00000013411	UTP20	95	66.792	ENSCPBG00000004844	UTP20	99	67.205	Chrysemys_picta_bellii
ENSODEG00000013411	UTP20	93	31.361	ENSCSAVG00000008252	-	97	31.361	Ciona_savignyi
ENSODEG00000013411	UTP20	100	78.276	ENSCANG00000034768	UTP20	100	81.126	Colobus_angolensis_palliatus
ENSODEG00000013411	UTP20	100	80.466	ENSCGRG00001017151	Utp20	100	80.466	Cricetulus_griseus_chok1gshd
ENSODEG00000013411	UTP20	100	80.194	ENSCGRG00000008595	Utp20	100	80.194	Cricetulus_griseus_crigri
ENSODEG00000013411	UTP20	98	54.007	ENSCSEG00000014760	utp20	99	54.155	Cynoglossus_semilaevis
ENSODEG00000013411	UTP20	99	54.147	ENSCVAG00000001727	utp20	100	54.219	Cyprinodon_variegatus
ENSODEG00000013411	UTP20	99	55.374	ENSDARG00000099280	utp20	99	56.087	Danio_rerio
ENSODEG00000013411	UTP20	100	79.207	ENSDNOG00000016845	UTP20	100	79.207	Dasypus_novemcinctus
ENSODEG00000013411	UTP20	97	82.871	ENSDORG00000014762	Utp20	99	82.516	Dipodomys_ordii
ENSODEG00000013411	UTP20	94	82.599	ENSETEG00000019983	UTP20	94	84.141	Echinops_telfairi
ENSODEG00000013411	UTP20	95	87.714	ENSEASG00005019981	UTP20	99	87.714	Equus_asinus_asinus
ENSODEG00000013411	UTP20	96	87.714	ENSECAG00000006876	UTP20	99	87.714	Equus_caballus
ENSODEG00000013411	UTP20	72	81.034	ENSEEUG00000003774	UTP20	74	81.034	Erinaceus_europaeus
ENSODEG00000013411	UTP20	100	54.763	ENSELUG00000000798	utp20	100	55.231	Esox_lucius
ENSODEG00000013411	UTP20	100	80.725	ENSFCAG00000006150	UTP20	100	80.776	Felis_catus
ENSODEG00000013411	UTP20	94	63.997	ENSFALG00000011135	UTP20	100	64.305	Ficedula_albicollis
ENSODEG00000013411	UTP20	100	71.542	ENSFDAG00000007567	UTP20	100	71.542	Fukomys_damarensis
ENSODEG00000013411	UTP20	95	53.861	ENSFHEG00000004142	utp20	100	54.006	Fundulus_heteroclitus
ENSODEG00000013411	UTP20	99	51.487	ENSGMOG00000006762	utp20	100	51.934	Gadus_morhua
ENSODEG00000013411	UTP20	100	65.717	ENSGALG00000011643	UTP20	100	65.895	Gallus_gallus
ENSODEG00000013411	UTP20	97	53.826	ENSGAFG00000006986	utp20	99	53.776	Gambusia_affinis
ENSODEG00000013411	UTP20	100	54.274	ENSGACG00000019092	utp20	100	54.287	Gasterosteus_aculeatus
ENSODEG00000013411	UTP20	67	67.343	ENSGAGG00000011169	UTP20	97	67.271	Gopherus_agassizii
ENSODEG00000013411	UTP20	100	80.660	ENSGGOG00000004904	UTP20	100	80.553	Gorilla_gorilla
ENSODEG00000013411	UTP20	100	54.536	ENSHBUG00000010613	utp20	100	55.377	Haplochromis_burtoni
ENSODEG00000013411	UTP20	100	84.283	ENSHGLG00000006422	UTP20	100	84.283	Heterocephalus_glaber_female
ENSODEG00000013411	UTP20	100	82.389	ENSHGLG00100001086	UTP20	100	82.389	Heterocephalus_glaber_male
ENSODEG00000013411	UTP20	100	53.133	ENSHCOG00000005421	utp20	100	53.217	Hippocampus_comes
ENSODEG00000013411	UTP20	100	55.116	ENSIPUG00000013717	utp20	99	55.223	Ictalurus_punctatus
ENSODEG00000013411	UTP20	100	81.649	ENSSTOG00000015995	UTP20	100	81.649	Ictidomys_tridecemlineatus
ENSODEG00000013411	UTP20	100	78.980	ENSJJAG00000019321	Utp20	100	78.980	Jaculus_jaculus
ENSODEG00000013411	UTP20	100	52.605	ENSKMAG00000005972	utp20	100	53.067	Kryptolebias_marmoratus
ENSODEG00000013411	UTP20	98	53.422	ENSLBEG00000000781	utp20	100	53.752	Labrus_bergylta
ENSODEG00000013411	UTP20	80	62.618	ENSLACG00000010098	UTP20	100	62.707	Latimeria_chalumnae
ENSODEG00000013411	UTP20	93	58.631	ENSLOCG00000015197	utp20	99	58.934	Lepisosteus_oculatus
ENSODEG00000013411	UTP20	100	79.280	ENSLAFG00000012983	UTP20	100	79.351	Loxodonta_africana
ENSODEG00000013411	UTP20	100	81.580	ENSMFAG00000037766	UTP20	100	81.508	Macaca_fascicularis
ENSODEG00000013411	UTP20	100	81.724	ENSMMUG00000012891	UTP20	100	81.652	Macaca_mulatta
ENSODEG00000013411	UTP20	100	79.605	ENSMNEG00000037418	UTP20	100	79.533	Macaca_nemestrina
ENSODEG00000013411	UTP20	100	79.548	ENSMLEG00000029148	UTP20	100	79.476	Mandrillus_leucophaeus
ENSODEG00000013411	UTP20	100	54.698	ENSMAMG00000002063	utp20	100	54.911	Mastacembelus_armatus
ENSODEG00000013411	UTP20	100	55.208	ENSMZEG00005018123	utp20	100	55.643	Maylandia_zebra
ENSODEG00000013411	UTP20	100	65.574	ENSMGAG00000011726	UTP20	100	65.609	Meleagris_gallopavo
ENSODEG00000013411	UTP20	65	81.156	ENSMAUG00000011898	Utp20	99	81.156	Mesocricetus_auratus
ENSODEG00000013411	UTP20	100	78.574	ENSMICG00000015736	UTP20	100	78.766	Microcebus_murinus
ENSODEG00000013411	UTP20	100	77.949	ENSMOCG00000015242	Utp20	100	77.949	Microtus_ochrogaster
ENSODEG00000013411	UTP20	100	52.101	ENSMMOG00000003360	utp20	100	52.273	Mola_mola
ENSODEG00000013411	UTP20	100	69.872	ENSMODG00000003141	UTP20	100	70.018	Monodelphis_domestica
ENSODEG00000013411	UTP20	100	55.070	ENSMALG00000002723	utp20	100	55.372	Monopterus_albus
ENSODEG00000013411	UTP20	100	79.800	MGP_CAROLIEiJ_G0015713	Utp20	100	79.621	Mus_caroli
ENSODEG00000013411	UTP20	100	80.036	ENSMUSG00000004356	Utp20	100	80.143	Mus_musculus
ENSODEG00000013411	UTP20	100	80.086	MGP_PahariEiJ_G0031372	Utp20	100	80.086	Mus_pahari
ENSODEG00000013411	UTP20	100	80.007	MGP_SPRETEiJ_G0016531	Utp20	98	95.238	Mus_spretus
ENSODEG00000013411	UTP20	100	80.925	ENSMPUG00000011641	UTP20	100	80.997	Mustela_putorius_furo
ENSODEG00000013411	UTP20	100	80.779	ENSMLUG00000002313	UTP20	100	80.564	Myotis_lucifugus
ENSODEG00000013411	UTP20	100	81.070	ENSNGAG00000013738	Utp20	100	81.070	Nannospalax_galili
ENSODEG00000013411	UTP20	81	77.612	ENSNBRG00000019464	utp20	99	77.612	Neolamprologus_brichardi
ENSODEG00000013411	UTP20	100	81.286	ENSNLEG00000006166	UTP20	100	81.214	Nomascus_leucogenys
ENSODEG00000013411	UTP20	91	100.000	ENSMEUG00000015457	UTP20	91	100.000	Notamacropus_eugenii
ENSODEG00000013411	UTP20	86	94.268	ENSOPRG00000010546	UTP20	87	94.268	Ochotona_princeps
ENSODEG00000013411	UTP20	100	55.335	ENSONIG00000009910	utp20	100	56.053	Oreochromis_niloticus
ENSODEG00000013411	UTP20	99	68.882	ENSOANG00000005578	UTP20	99	68.951	Ornithorhynchus_anatinus
ENSODEG00000013411	UTP20	100	81.476	ENSOCUG00000010475	UTP20	100	81.476	Oryctolagus_cuniculus
ENSODEG00000013411	UTP20	94	55.042	ENSORLG00000008900	utp20	100	55.042	Oryzias_latipes
ENSODEG00000013411	UTP20	94	54.832	ENSORLG00020005879	utp20	100	54.832	Oryzias_latipes_hni
ENSODEG00000013411	UTP20	98	51.576	ENSORLG00015002843	utp20	100	52.025	Oryzias_latipes_hsok
ENSODEG00000013411	UTP20	98	53.062	ENSOMEG00000023583	utp20	100	53.810	Oryzias_melastigma
ENSODEG00000013411	UTP20	100	80.624	ENSOGAG00000015130	UTP20	100	80.373	Otolemur_garnettii
ENSODEG00000013411	UTP20	100	80.718	ENSOARG00000014722	UTP20	100	80.718	Ovis_aries
ENSODEG00000013411	UTP20	100	81.472	ENSPPAG00000001381	UTP20	100	81.364	Pan_paniscus
ENSODEG00000013411	UTP20	100	81.028	ENSPPRG00000001026	UTP20	100	80.956	Panthera_pardus
ENSODEG00000013411	UTP20	100	80.956	ENSPTIG00000020972	UTP20	100	80.884	Panthera_tigris_altaica
ENSODEG00000013411	UTP20	100	81.508	ENSPTRG00000005349	UTP20	100	81.400	Pan_troglodytes
ENSODEG00000013411	UTP20	100	81.544	ENSPANG00000020388	UTP20	100	81.472	Papio_anubis
ENSODEG00000013411	UTP20	100	55.032	ENSPKIG00000007196	utp20	99	55.103	Paramormyrops_kingsleyae
ENSODEG00000013411	UTP20	94	66.919	ENSPSIG00000016689	UTP20	100	66.844	Pelodiscus_sinensis
ENSODEG00000013411	UTP20	100	54.360	ENSPMGG00000004066	utp20	100	54.750	Periophthalmus_magnuspinnatus
ENSODEG00000013411	UTP20	100	80.323	ENSPEMG00000024120	Utp20	100	80.596	Peromyscus_maniculatus_bairdii
ENSODEG00000013411	UTP20	100	70.288	ENSPCIG00000009298	UTP20	100	70.199	Phascolarctos_cinereus
ENSODEG00000013411	UTP20	92	53.149	ENSPFOG00000003312	utp20	100	53.326	Poecilia_formosa
ENSODEG00000013411	UTP20	95	55.955	ENSPLAG00000012874	utp20	99	55.955	Poecilia_latipinna
ENSODEG00000013411	UTP20	95	55.388	ENSPMEG00000005915	utp20	99	55.388	Poecilia_mexicana
ENSODEG00000013411	UTP20	98	53.090	ENSPREG00000013285	utp20	99	53.168	Poecilia_reticulata
ENSODEG00000013411	UTP20	88	82.389	ENSPPYG00000004871	UTP20	100	82.389	Pongo_abelii
ENSODEG00000013411	UTP20	84	82.828	ENSPCAG00000012791	UTP20	85	82.828	Procavia_capensis
ENSODEG00000013411	UTP20	96	82.888	ENSPCOG00000024948	UTP20	100	79.526	Propithecus_coquereli
ENSODEG00000013411	UTP20	100	79.297	ENSPVAG00000008113	UTP20	100	79.310	Pteropus_vampyrus
ENSODEG00000013411	UTP20	100	54.295	ENSPNYG00000011561	utp20	100	55.142	Pundamilia_nyererei
ENSODEG00000013411	UTP20	100	54.732	ENSPNAG00000006176	utp20	99	55.208	Pygocentrus_nattereri
ENSODEG00000013411	UTP20	100	80.280	ENSRNOG00000005823	Utp20	100	80.280	Rattus_norvegicus
ENSODEG00000013411	UTP20	100	79.928	ENSRBIG00000025384	UTP20	100	79.821	Rhinopithecus_bieti
ENSODEG00000013411	UTP20	100	81.472	ENSRROG00000041254	UTP20	100	81.364	Rhinopithecus_roxellana
ENSODEG00000013411	UTP20	100	81.149	ENSSBOG00000035762	UTP20	100	81.169	Saimiri_boliviensis_boliviensis
ENSODEG00000013411	UTP20	98	67.817	ENSSHAG00000002298	UTP20	99	67.708	Sarcophilus_harrisii
ENSODEG00000013411	UTP20	100	57.466	ENSSFOG00015001674	utp20	100	57.609	Scleropages_formosus
ENSODEG00000013411	UTP20	98	52.789	ENSSMAG00000016460	utp20	100	53.072	Scophthalmus_maximus
ENSODEG00000013411	UTP20	100	55.433	ENSSDUG00000013730	utp20	100	55.786	Seriola_dumerili
ENSODEG00000013411	UTP20	100	55.614	ENSSLDG00000012844	utp20	100	56.071	Seriola_lalandi_dorsalis
ENSODEG00000013411	UTP20	63	98.148	ENSSARG00000002796	-	62	98.148	Sorex_araneus
ENSODEG00000013411	UTP20	99	64.729	ENSSPUG00000004513	UTP20	99	64.708	Sphenodon_punctatus
ENSODEG00000013411	UTP20	100	55.271	ENSSPAG00000014674	utp20	100	55.437	Stegastes_partitus
ENSODEG00000013411	UTP20	100	81.501	ENSSSCG00000000869	UTP20	100	81.501	Sus_scrofa
ENSODEG00000013411	UTP20	77	65.426	ENSTGUG00000009053	-	100	65.826	Taeniopygia_guttata
ENSODEG00000013411	UTP20	99	55.437	ENSTRUG00000005849	utp20	99	55.560	Takifugu_rubripes
ENSODEG00000013411	UTP20	100	53.726	ENSTNIG00000006921	utp20	100	53.898	Tetraodon_nigroviridis
ENSODEG00000013411	UTP20	89	76.796	ENSTBEG00000011917	UTP20	92	76.796	Tupaia_belangeri
ENSODEG00000013411	UTP20	99	77.790	ENSTTRG00000017195	UTP20	98	84.330	Tursiops_truncatus
ENSODEG00000013411	UTP20	100	81.102	ENSUAMG00000016363	UTP20	100	81.102	Ursus_americanus
ENSODEG00000013411	UTP20	100	80.315	ENSUMAG00000000077	UTP20	100	80.315	Ursus_maritimus
ENSODEG00000013411	UTP20	89	83.995	ENSVPAG00000011620	UTP20	92	83.995	Vicugna_pacos
ENSODEG00000013411	UTP20	100	81.021	ENSVVUG00000018110	UTP20	99	82.022	Vulpes_vulpes
ENSODEG00000013411	UTP20	98	60.994	ENSXETG00000032346	UTP20	100	61.245	Xenopus_tropicalis
ENSODEG00000013411	UTP20	98	52.954	ENSXMAG00000006503	utp20	99	53.012	Xiphophorus_maculatus