EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013413 (Gene tree)
Gene ID: -
Gene Symbol: TARBP2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 4083 bases
Position: chrJH651608.1:5859717-5863799
Accession: 101568303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018201	dsrm	PF00035.26	3.3e-33	1	2
ENSODEP00000018201	dsrm	PF00035.26	3.3e-33	2	2
ENSODEP00000018201	DND1_DSRM	PF14709.7	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018432	TARBP2-201	999	XM_004637902	ENSODEP00000018201	226 (aa)	XP_004637959	-

Gene Model

Click here to download ENSODEG00000013413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013413	TARBP2	92	43.478	ENSODEG00000008743	-	54	43.269
ENSODEG00000013413	TARBP2	92	37.681	ENSODEG00000007930	-	58	38.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013413	TARBP2	100	95.133	ENSG00000139546	TARBP2	99	100.000	Homo_sapiens
ENSODEG00000013413	TARBP2	100	68.584	ENSAPOG00000019892	tarbp2	60	69.027	Acanthochromis_polyacanthus
ENSODEG00000013413	TARBP2	100	94.690	ENSAMEG00000012601	TARBP2	62	94.690	Ailuropoda_melanoleuca
ENSODEG00000013413	TARBP2	100	68.142	ENSACIG00000016780	tarbp2	59	68.584	Amphilophus_citrinellus
ENSODEG00000013413	TARBP2	100	68.584	ENSAOCG00000005201	tarbp2	60	69.027	Amphiprion_ocellaris
ENSODEG00000013413	TARBP2	100	68.584	ENSAPEG00000008376	tarbp2	60	69.027	Amphiprion_percula
ENSODEG00000013413	TARBP2	100	68.282	ENSATEG00000025012	tarbp2	60	68.559	Anabas_testudineus
ENSODEG00000013413	TARBP2	100	80.263	ENSACAG00000001100	TARBP2	62	79.386	Anolis_carolinensis
ENSODEG00000013413	TARBP2	100	95.575	ENSANAG00000034453	TARBP2	67	100.000	Aotus_nancymaae
ENSODEG00000013413	TARBP2	100	67.699	ENSACLG00000018569	tarbp2	60	68.142	Astatotilapia_calliptera
ENSODEG00000013413	TARBP2	100	68.559	ENSAMXG00000016665	tarbp2	60	69.469	Astyanax_mexicanus
ENSODEG00000013413	TARBP2	100	94.690	ENSBTAG00000000435	TARBP2	62	94.690	Bos_taurus
ENSODEG00000013413	TARBP2	100	95.133	ENSCJAG00000018668	TARBP2	63	95.133	Callithrix_jacchus
ENSODEG00000013413	TARBP2	100	94.248	ENSCAFG00000006874	TARBP2	62	94.248	Canis_familiaris
ENSODEG00000013413	TARBP2	100	96.018	ENSCAFG00020020735	TARBP2	66	96.018	Canis_lupus_dingo
ENSODEG00000013413	TARBP2	100	89.565	ENSCHIG00000026017	TARBP2	62	90.909	Capra_hircus
ENSODEG00000013413	TARBP2	100	95.575	ENSTSYG00000035683	TARBP2	67	100.000	Carlito_syrichta
ENSODEG00000013413	TARBP2	100	97.345	ENSCPOG00000001009	TARBP2	62	97.345	Cavia_porcellus
ENSODEG00000013413	TARBP2	100	95.575	ENSCCAG00000033025	TARBP2	91	100.000	Cebus_capucinus
ENSODEG00000013413	TARBP2	100	94.690	ENSCATG00000026344	TARBP2	67	100.000	Cercocebus_atys
ENSODEG00000013413	TARBP2	100	98.673	ENSCLAG00000009175	TARBP2	62	98.673	Chinchilla_lanigera
ENSODEG00000013413	TARBP2	100	95.133	ENSCSAG00000005479	TARBP2	62	95.133	Chlorocebus_sabaeus
ENSODEG00000013413	TARBP2	100	80.973	ENSCPBG00000000654	TARBP2	66	79.646	Chrysemys_picta_bellii
ENSODEG00000013413	TARBP2	100	94.690	ENSCANG00000040415	TARBP2	91	98.113	Colobus_angolensis_palliatus
ENSODEG00000013413	TARBP2	100	94.248	ENSCGRG00001011856	TARBP2	62	94.248	Cricetulus_griseus_chok1gshd
ENSODEG00000013413	TARBP2	100	94.248	ENSCGRG00000009088	TARBP2	93	94.248	Cricetulus_griseus_crigri
ENSODEG00000013413	TARBP2	100	69.469	ENSCSEG00000010631	tarbp2	60	70.796	Cynoglossus_semilaevis
ENSODEG00000013413	TARBP2	100	72.124	ENSCVAG00000009832	tarbp2	60	72.566	Cyprinodon_variegatus
ENSODEG00000013413	TARBP2	100	67.257	ENSDARG00000070471	tarbp2	60	68.584	Danio_rerio
ENSODEG00000013413	TARBP2	100	94.248	ENSDNOG00000002144	TARBP2	62	94.248	Dasypus_novemcinctus
ENSODEG00000013413	TARBP2	100	72.124	ENSETEG00000002458	TARBP2	62	72.124	Echinops_telfairi
ENSODEG00000013413	TARBP2	97	60.000	ENSEBUG00000002377	tarbp2	60	59.091	Eptatretus_burgeri
ENSODEG00000013413	TARBP2	100	95.133	ENSEASG00005010030	TARBP2	62	95.133	Equus_asinus_asinus
ENSODEG00000013413	TARBP2	100	94.690	ENSECAG00000011695	TARBP2	67	100.000	Equus_caballus
ENSODEG00000013413	TARBP2	100	82.743	ENSEEUG00000001128	-	72	82.743	Erinaceus_europaeus
ENSODEG00000013413	TARBP2	100	68.142	ENSELUG00000010642	tarbp2	61	68.142	Esox_lucius
ENSODEG00000013413	TARBP2	100	94.690	ENSFCAG00000007757	TARBP2	62	94.690	Felis_catus
ENSODEG00000013413	TARBP2	100	96.460	ENSFDAG00000011932	TARBP2	93	96.460	Fukomys_damarensis
ENSODEG00000013413	TARBP2	100	71.681	ENSFHEG00000016118	tarbp2	64	72.124	Fundulus_heteroclitus
ENSODEG00000013413	TARBP2	100	69.912	ENSGMOG00000001290	tarbp2	60	69.912	Gadus_morhua
ENSODEG00000013413	TARBP2	100	71.239	ENSGAFG00000013341	tarbp2	60	70.796	Gambusia_affinis
ENSODEG00000013413	TARBP2	100	67.401	ENSGACG00000006645	tarbp2	61	68.103	Gasterosteus_aculeatus
ENSODEG00000013413	TARBP2	100	80.973	ENSGAGG00000021169	TARBP2	62	79.646	Gopherus_agassizii
ENSODEG00000013413	TARBP2	100	95.133	ENSGGOG00000012637	TARBP2	67	100.000	Gorilla_gorilla
ENSODEG00000013413	TARBP2	100	67.699	ENSHBUG00000018639	tarbp2	60	68.142	Haplochromis_burtoni
ENSODEG00000013413	TARBP2	100	97.788	ENSHGLG00000001284	TARBP2	62	97.788	Heterocephalus_glaber_female
ENSODEG00000013413	TARBP2	100	97.788	ENSHGLG00100011274	TARBP2	62	97.788	Heterocephalus_glaber_male
ENSODEG00000013413	TARBP2	99	68.444	ENSHCOG00000001027	tarbp2	60	67.556	Hippocampus_comes
ENSODEG00000013413	TARBP2	100	69.469	ENSIPUG00000023701	tarbp2	62	68.085	Ictalurus_punctatus
ENSODEG00000013413	TARBP2	100	96.460	ENSSTOG00000003678	TARBP2	93	96.460	Ictidomys_tridecemlineatus
ENSODEG00000013413	TARBP2	58	82.576	ENSJJAG00000014366	-	85	82.576	Jaculus_jaculus
ENSODEG00000013413	TARBP2	100	70.614	ENSKMAG00000012142	tarbp2	60	70.354	Kryptolebias_marmoratus
ENSODEG00000013413	TARBP2	100	71.366	ENSLBEG00000015027	tarbp2	61	70.306	Labrus_bergylta
ENSODEG00000013413	TARBP2	60	94.340	ENSLACG00000007087	TARBP2	59	59.292	Latimeria_chalumnae
ENSODEG00000013413	TARBP2	100	71.239	ENSLOCG00000005711	tarbp2	62	69.912	Lepisosteus_oculatus
ENSODEG00000013413	TARBP2	100	83.260	ENSLAFG00000002620	TARBP2	80	83.260	Loxodonta_africana
ENSODEG00000013413	TARBP2	100	94.690	ENSMFAG00000013567	TARBP2	67	100.000	Macaca_fascicularis
ENSODEG00000013413	TARBP2	100	94.690	ENSMMUG00000018492	TARBP2	62	94.690	Macaca_mulatta
ENSODEG00000013413	TARBP2	100	94.690	ENSMNEG00000036477	TARBP2	67	100.000	Macaca_nemestrina
ENSODEG00000013413	TARBP2	100	94.690	ENSMLEG00000029583	TARBP2	67	100.000	Mandrillus_leucophaeus
ENSODEG00000013413	TARBP2	100	67.257	ENSMAMG00000010272	tarbp2	63	68.860	Mastacembelus_armatus
ENSODEG00000013413	TARBP2	100	67.699	ENSMZEG00005006895	tarbp2	60	68.142	Maylandia_zebra
ENSODEG00000013413	TARBP2	100	94.248	ENSMAUG00000019805	Tarbp2	62	94.248	Mesocricetus_auratus
ENSODEG00000013413	TARBP2	100	96.460	ENSMICG00000027441	TARBP2	75	100.000	Microcebus_murinus
ENSODEG00000013413	TARBP2	100	92.478	ENSMOCG00000003691	Tarbp2	62	92.478	Microtus_ochrogaster
ENSODEG00000013413	TARBP2	100	71.239	ENSMMOG00000010374	tarbp2	64	71.239	Mola_mola
ENSODEG00000013413	TARBP2	100	66.372	ENSMALG00000009773	tarbp2	60	69.027	Monopterus_albus
ENSODEG00000013413	TARBP2	100	92.920	MGP_CAROLIEiJ_G0020356	Tarbp2	100	94.690	Mus_caroli
ENSODEG00000013413	TARBP2	100	92.920	ENSMUSG00000023051	Tarbp2	100	94.690	Mus_musculus
ENSODEG00000013413	TARBP2	100	93.363	MGP_PahariEiJ_G0020355	Tarbp2	91	100.000	Mus_pahari
ENSODEG00000013413	TARBP2	100	92.920	MGP_SPRETEiJ_G0021249	Tarbp2	100	94.690	Mus_spretus
ENSODEG00000013413	TARBP2	100	93.805	ENSMPUG00000005944	TARBP2	62	93.805	Mustela_putorius_furo
ENSODEG00000013413	TARBP2	100	94.690	ENSMLUG00000010035	TARBP2	62	94.690	Myotis_lucifugus
ENSODEG00000013413	TARBP2	64	64.138	ENSNBRG00000003967	TARBP2	76	64.138	Neolamprologus_brichardi
ENSODEG00000013413	TARBP2	100	95.133	ENSNLEG00000017690	TARBP2	67	100.000	Nomascus_leucogenys
ENSODEG00000013413	TARBP2	100	80.531	ENSMEUG00000001916	TARBP2	59	80.531	Notamacropus_eugenii
ENSODEG00000013413	TARBP2	100	70.044	ENSONIG00000005115	tarbp2	63	69.737	Oreochromis_niloticus
ENSODEG00000013413	TARBP2	100	92.920	ENSOCUG00000005700	TARBP2	64	92.920	Oryctolagus_cuniculus
ENSODEG00000013413	TARBP2	100	69.912	ENSORLG00000005209	tarbp2	60	69.737	Oryzias_latipes
ENSODEG00000013413	TARBP2	100	69.912	ENSORLG00020017755	tarbp2	60	69.737	Oryzias_latipes_hni
ENSODEG00000013413	TARBP2	100	69.912	ENSORLG00015013237	tarbp2	60	69.737	Oryzias_latipes_hsok
ENSODEG00000013413	TARBP2	100	69.469	ENSOMEG00000018860	tarbp2	60	69.469	Oryzias_melastigma
ENSODEG00000013413	TARBP2	100	95.575	ENSOGAG00000001744	TARBP2	62	95.575	Otolemur_garnettii
ENSODEG00000013413	TARBP2	100	94.690	ENSOARG00000016437	TARBP2	62	94.690	Ovis_aries
ENSODEG00000013413	TARBP2	100	95.133	ENSPPAG00000030429	TARBP2	67	100.000	Pan_paniscus
ENSODEG00000013413	TARBP2	100	94.690	ENSPPRG00000000189	TARBP2	62	94.690	Panthera_pardus
ENSODEG00000013413	TARBP2	100	84.848	ENSPTIG00000007859	TARBP2	61	83.983	Panthera_tigris_altaica
ENSODEG00000013413	TARBP2	100	95.133	ENSPTRG00000005020	TARBP2	67	100.000	Pan_troglodytes
ENSODEG00000013413	TARBP2	100	94.690	ENSPANG00000010689	TARBP2	67	100.000	Papio_anubis
ENSODEG00000013413	TARBP2	100	71.239	ENSPKIG00000002455	tarbp2	61	71.239	Paramormyrops_kingsleyae
ENSODEG00000013413	TARBP2	100	70.354	ENSPMGG00000006497	tarbp2	60	70.354	Periophthalmus_magnuspinnatus
ENSODEG00000013413	TARBP2	100	92.035	ENSPEMG00000014285	Tarbp2	62	92.035	Peromyscus_maniculatus_bairdii
ENSODEG00000013413	TARBP2	90	65.517	ENSPMAG00000000105	tarbp2	57	64.532	Petromyzon_marinus
ENSODEG00000013413	TARBP2	100	80.531	ENSPCIG00000006672	TARBP2	54	80.531	Phascolarctos_cinereus
ENSODEG00000013413	TARBP2	100	72.566	ENSPFOG00000007586	tarbp2	60	72.566	Poecilia_formosa
ENSODEG00000013413	TARBP2	100	73.009	ENSPLAG00000017659	tarbp2	60	73.009	Poecilia_latipinna
ENSODEG00000013413	TARBP2	100	72.566	ENSPMEG00000007775	tarbp2	60	72.566	Poecilia_mexicana
ENSODEG00000013413	TARBP2	100	72.566	ENSPREG00000007815	tarbp2	60	72.566	Poecilia_reticulata
ENSODEG00000013413	TARBP2	100	84.071	ENSPPYG00000004583	TARBP2	59	84.071	Pongo_abelii
ENSODEG00000013413	TARBP2	100	95.575	ENSPCOG00000013102	TARBP2	67	100.000	Propithecus_coquereli
ENSODEG00000013413	TARBP2	100	85.841	ENSPVAG00000012286	TARBP2	62	85.841	Pteropus_vampyrus
ENSODEG00000013413	TARBP2	100	67.699	ENSPNYG00000014125	tarbp2	60	68.142	Pundamilia_nyererei
ENSODEG00000013413	TARBP2	100	67.105	ENSPNAG00000011128	tarbp2	60	68.584	Pygocentrus_nattereri
ENSODEG00000013413	TARBP2	100	92.035	ENSRNOG00000042355	Tarbp2	62	93.805	Rattus_norvegicus
ENSODEG00000013413	TARBP2	100	94.690	ENSRBIG00000027150	TARBP2	67	100.000	Rhinopithecus_bieti
ENSODEG00000013413	TARBP2	100	94.690	ENSRROG00000044783	TARBP2	67	100.000	Rhinopithecus_roxellana
ENSODEG00000013413	TARBP2	100	95.575	ENSSBOG00000027305	TARBP2	67	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000013413	TARBP2	100	84.071	ENSSHAG00000007064	TARBP2	62	83.628	Sarcophilus_harrisii
ENSODEG00000013413	TARBP2	100	69.469	ENSSFOG00015010784	tarbp2	62	68.282	Scleropages_formosus
ENSODEG00000013413	TARBP2	100	70.044	ENSSMAG00000012769	tarbp2	62	70.354	Scophthalmus_maximus
ENSODEG00000013413	TARBP2	100	67.841	ENSSDUG00000018818	tarbp2	60	68.421	Seriola_dumerili
ENSODEG00000013413	TARBP2	100	67.841	ENSSLDG00000001835	tarbp2	60	69.027	Seriola_lalandi_dorsalis
ENSODEG00000013413	TARBP2	100	45.455	ENSSPUG00000005895	TARBP2	57	47.619	Sphenodon_punctatus
ENSODEG00000013413	TARBP2	100	70.354	ENSSPAG00000022797	tarbp2	60	69.027	Stegastes_partitus
ENSODEG00000013413	TARBP2	100	95.133	ENSSSCG00000000276	TARBP2	66	95.133	Sus_scrofa
ENSODEG00000013413	TARBP2	100	55.085	ENSTGUG00000017031	TARBP2	86	54.237	Taeniopygia_guttata
ENSODEG00000013413	TARBP2	100	69.912	ENSTRUG00000014379	tarbp2	60	69.469	Takifugu_rubripes
ENSODEG00000013413	TARBP2	100	69.737	ENSTNIG00000007065	tarbp2	60	69.737	Tetraodon_nigroviridis
ENSODEG00000013413	TARBP2	100	93.805	ENSTTRG00000017177	TARBP2	62	93.805	Tursiops_truncatus
ENSODEG00000013413	TARBP2	100	94.690	ENSUAMG00000009011	TARBP2	62	94.690	Ursus_americanus
ENSODEG00000013413	TARBP2	100	94.690	ENSUMAG00000010461	TARBP2	62	94.690	Ursus_maritimus
ENSODEG00000013413	TARBP2	100	96.018	ENSVVUG00000028150	TARBP2	66	96.018	Vulpes_vulpes
ENSODEG00000013413	TARBP2	100	72.247	ENSXETG00000012644	tarbp2	62	72.247	Xenopus_tropicalis
ENSODEG00000013413	TARBP2	100	71.681	ENSXMAG00000017836	tarbp2	60	71.681	Xiphophorus_maculatus