EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 419 bases
Position: chrJH651547.1:4876829-4877247
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018266	RRM_1	PF00076.22	1.9e-23	1	2
ENSODEP00000018266	RRM_1	PF00076.22	1.9e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018498	-	372	-	ENSODEP00000018266	124 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013457	-	90	77.953	ENSODEG00000002920	-	80	77.953
ENSODEG00000013457	-	99	82.171	ENSODEG00000003229	PABPC1	52	82.171
ENSODEG00000013457	-	100	66.429	ENSODEG00000018540	-	70	66.429
ENSODEG00000013457	-	100	69.286	ENSODEG00000013269	-	72	69.286
ENSODEG00000013457	-	99	69.784	ENSODEG00000015482	PABPC1L	61	69.784
ENSODEG00000013457	-	100	85.714	ENSODEG00000006592	-	54	85.714
ENSODEG00000013457	-	91	40.000	ENSODEG00000009409	TIA1	62	31.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013457	-	86	100.000	ENSG00000090621	PABPC4	99	83.784	Homo_sapiens
ENSODEG00000013457	-	100	82.857	ENSAPOG00000001161	pabpc4	53	82.857	Acanthochromis_polyacanthus
ENSODEG00000013457	-	100	85.714	ENSAMEG00000011535	-	50	85.714	Ailuropoda_melanoleuca
ENSODEG00000013457	-	100	82.857	ENSACIG00000023343	pabpc4	53	82.857	Amphilophus_citrinellus
ENSODEG00000013457	-	100	82.857	ENSAOCG00000021529	pabpc4	55	82.857	Amphiprion_ocellaris
ENSODEG00000013457	-	100	82.857	ENSAPEG00000019196	pabpc4	53	82.857	Amphiprion_percula
ENSODEG00000013457	-	100	82.857	ENSATEG00000007402	pabpc4	53	82.857	Anabas_testudineus
ENSODEG00000013457	-	100	84.286	ENSAPLG00000009729	-	53	84.286	Anas_platyrhynchos
ENSODEG00000013457	-	99	81.373	ENSACAG00000002544	PABPC4	53	81.373	Anolis_carolinensis
ENSODEG00000013457	-	100	85.714	ENSANAG00000025079	PABPC4	53	85.714	Aotus_nancymaae
ENSODEG00000013457	-	100	82.857	ENSACLG00000019558	pabpc4	53	82.857	Astatotilapia_calliptera
ENSODEG00000013457	-	100	85.714	ENSBTAG00000017125	PABPC4	52	85.714	Bos_taurus
ENSODEG00000013457	-	96	77.778	ENSBTAG00000048536	-	77	77.778	Bos_taurus
ENSODEG00000013457	-	100	85.714	ENSCJAG00000002512	-	53	85.714	Callithrix_jacchus
ENSODEG00000013457	-	100	85.714	ENSCAFG00000003081	PABPC4	53	85.714	Canis_familiaris
ENSODEG00000013457	-	100	85.714	ENSCAFG00020004161	PABPC4	50	85.714	Canis_lupus_dingo
ENSODEG00000013457	-	100	85.714	ENSCHIG00000019398	-	50	85.714	Capra_hircus
ENSODEG00000013457	-	100	85.714	ENSTSYG00000006532	PABPC4	53	85.714	Carlito_syrichta
ENSODEG00000013457	-	100	85.714	ENSCAPG00000015984	PABPC4	55	85.714	Cavia_aperea
ENSODEG00000013457	-	100	85.714	ENSCPOG00000009552	PABPC4	54	85.714	Cavia_porcellus
ENSODEG00000013457	-	100	85.714	ENSCCAG00000037306	PABPC4	53	85.714	Cebus_capucinus
ENSODEG00000013457	-	100	85.714	ENSCATG00000042164	PABPC4	53	85.714	Cercocebus_atys
ENSODEG00000013457	-	100	85.714	ENSCLAG00000011899	PABPC4	53	85.714	Chinchilla_lanigera
ENSODEG00000013457	-	100	85.714	ENSCSAG00000001135	PABPC4	50	85.714	Chlorocebus_sabaeus
ENSODEG00000013457	-	99	82.407	ENSCHOG00000005327	PABPC4	51	82.407	Choloepus_hoffmanni
ENSODEG00000013457	-	100	84.286	ENSCPBG00000001038	PABPC4	53	84.286	Chrysemys_picta_bellii
ENSODEG00000013457	-	100	85.714	ENSCANG00000034177	PABPC4	54	85.714	Colobus_angolensis_palliatus
ENSODEG00000013457	-	100	85.714	ENSCGRG00001018166	Pabpc4	55	85.714	Cricetulus_griseus_chok1gshd
ENSODEG00000013457	-	100	85.714	ENSCGRG00000009777	Pabpc4	55	85.714	Cricetulus_griseus_crigri
ENSODEG00000013457	-	100	82.857	ENSCSEG00000000130	pabpc4	53	82.857	Cynoglossus_semilaevis
ENSODEG00000013457	-	100	82.857	ENSCVAG00000019246	pabpc4	54	82.857	Cyprinodon_variegatus
ENSODEG00000013457	-	100	83.571	ENSDARG00000059259	pabpc4	55	83.571	Danio_rerio
ENSODEG00000013457	-	99	83.333	ENSDNOG00000018444	-	53	83.333	Dasypus_novemcinctus
ENSODEG00000013457	-	100	85.714	ENSDORG00000011581	Pabpc4	52	85.714	Dipodomys_ordii
ENSODEG00000013457	-	100	82.143	ENSEBUG00000000992	pabpc4	57	82.143	Eptatretus_burgeri
ENSODEG00000013457	-	100	82.143	ENSEBUG00000013782	pabpc4	55	82.143	Eptatretus_burgeri
ENSODEG00000013457	-	100	85.714	ENSEASG00005014119	PABPC4	50	85.714	Equus_asinus_asinus
ENSODEG00000013457	-	100	85.714	ENSECAG00000009396	PABPC4	50	85.714	Equus_caballus
ENSODEG00000013457	-	100	85.612	ENSEEUG00000002962	PABPC4	51	85.612	Erinaceus_europaeus
ENSODEG00000013457	-	100	81.429	ENSELUG00000003195	pabpc4	52	81.429	Esox_lucius
ENSODEG00000013457	-	100	85.714	ENSFCAG00000015254	-	53	85.714	Felis_catus
ENSODEG00000013457	-	100	84.286	ENSFALG00000000543	PABPC4	53	84.286	Ficedula_albicollis
ENSODEG00000013457	-	100	85.714	ENSFDAG00000020016	-	50	85.714	Fukomys_damarensis
ENSODEG00000013457	-	100	82.857	ENSFHEG00000007548	pabpc4	56	82.857	Fundulus_heteroclitus
ENSODEG00000013457	-	100	82.857	ENSGMOG00000019025	pabpc4	52	82.857	Gadus_morhua
ENSODEG00000013457	-	100	84.286	ENSGALG00000003800	PABPC4	53	84.286	Gallus_gallus
ENSODEG00000013457	-	100	82.143	ENSGAFG00000018195	pabpc4	74	82.143	Gambusia_affinis
ENSODEG00000013457	-	100	82.857	ENSGACG00000007179	pabpc4	53	82.857	Gasterosteus_aculeatus
ENSODEG00000013457	-	100	84.286	ENSGAGG00000001888	PABPC4	53	84.286	Gopherus_agassizii
ENSODEG00000013457	-	100	85.714	ENSGGOG00000004002	PABPC4	53	85.714	Gorilla_gorilla
ENSODEG00000013457	-	100	82.857	ENSHBUG00000020206	pabpc4	53	82.857	Haplochromis_burtoni
ENSODEG00000013457	-	100	85.714	ENSHGLG00000011162	PABPC4	53	85.714	Heterocephalus_glaber_female
ENSODEG00000013457	-	100	85.714	ENSHGLG00100001580	PABPC4	53	85.714	Heterocephalus_glaber_male
ENSODEG00000013457	-	100	82.857	ENSHCOG00000012694	pabpc4	54	82.857	Hippocampus_comes
ENSODEG00000013457	-	100	83.571	ENSIPUG00000016620	pabpc4	53	83.571	Ictalurus_punctatus
ENSODEG00000013457	-	100	85.714	ENSSTOG00000010416	PABPC4	54	85.714	Ictidomys_tridecemlineatus
ENSODEG00000013457	-	100	85.000	ENSJJAG00000007781	Pabpc4	51	85.000	Jaculus_jaculus
ENSODEG00000013457	-	100	82.857	ENSKMAG00000013597	pabpc4	55	82.857	Kryptolebias_marmoratus
ENSODEG00000013457	-	100	82.857	ENSLBEG00000013654	pabpc4	53	82.857	Labrus_bergylta
ENSODEG00000013457	-	100	84.286	ENSLACG00000011907	PABPC4	53	84.286	Latimeria_chalumnae
ENSODEG00000013457	-	100	84.286	ENSLOCG00000001877	pabpc4	52	84.286	Lepisosteus_oculatus
ENSODEG00000013457	-	100	85.714	ENSLAFG00000000151	PABPC4	54	85.714	Loxodonta_africana
ENSODEG00000013457	-	100	85.714	ENSMFAG00000041481	PABPC4	53	85.714	Macaca_fascicularis
ENSODEG00000013457	-	100	85.714	ENSMMUG00000007497	PABPC4	50	85.714	Macaca_mulatta
ENSODEG00000013457	-	100	85.714	ENSMNEG00000043054	PABPC4	53	85.714	Macaca_nemestrina
ENSODEG00000013457	-	100	85.714	ENSMLEG00000040716	PABPC4	53	85.714	Mandrillus_leucophaeus
ENSODEG00000013457	-	100	82.857	ENSMAMG00000010025	pabpc4	55	82.857	Mastacembelus_armatus
ENSODEG00000013457	-	100	82.857	ENSMZEG00005006141	pabpc4	56	82.857	Maylandia_zebra
ENSODEG00000013457	-	99	81.651	ENSMGAG00000005408	PABPC4	51	81.651	Meleagris_gallopavo
ENSODEG00000013457	-	100	79.200	ENSMAUG00000004089	-	74	79.200	Mesocricetus_auratus
ENSODEG00000013457	-	99	61.224	ENSMICG00000036729	-	56	61.224	Microcebus_murinus
ENSODEG00000013457	-	100	85.714	ENSMICG00000016633	-	61	85.714	Microcebus_murinus
ENSODEG00000013457	-	100	85.714	ENSMOCG00000006763	Pabpc4	54	85.714	Microtus_ochrogaster
ENSODEG00000013457	-	100	82.857	ENSMMOG00000002363	pabpc4	54	82.857	Mola_mola
ENSODEG00000013457	-	100	84.286	ENSMODG00000017657	-	51	84.286	Monodelphis_domestica
ENSODEG00000013457	-	100	82.857	ENSMALG00000011017	pabpc4	53	82.857	Monopterus_albus
ENSODEG00000013457	-	99	85.612	MGP_CAROLIEiJ_G0026435	-	95	85.075	Mus_caroli
ENSODEG00000013457	-	99	81.373	MGP_CAROLIEiJ_G0024864	-	53	81.373	Mus_caroli
ENSODEG00000013457	-	100	85.000	ENSMUSG00000011257	Pabpc4	80	84.444	Mus_musculus
ENSODEG00000013457	-	100	85.714	MGP_PahariEiJ_G0028765	Pabpc4	96	85.185	Mus_pahari
ENSODEG00000013457	-	100	85.000	MGP_SPRETEiJ_G0027415	Pabpc4	96	84.444	Mus_spretus
ENSODEG00000013457	-	100	85.714	ENSMPUG00000014414	-	50	85.714	Mustela_putorius_furo
ENSODEG00000013457	-	100	85.714	ENSMLUG00000012068	PABPC4	54	85.714	Myotis_lucifugus
ENSODEG00000013457	-	100	85.714	ENSNGAG00000018292	Pabpc4	54	85.714	Nannospalax_galili
ENSODEG00000013457	-	100	82.857	ENSNBRG00000009708	pabpc4	66	82.857	Neolamprologus_brichardi
ENSODEG00000013457	-	100	85.714	ENSNLEG00000011928	PABPC4	53	85.714	Nomascus_leucogenys
ENSODEG00000013457	-	100	85.714	ENSOPRG00000011984	PABPC4	54	85.714	Ochotona_princeps
ENSODEG00000013457	-	100	82.857	ENSONIG00000008176	pabpc4	53	82.857	Oreochromis_niloticus
ENSODEG00000013457	-	100	84.286	ENSOANG00000010001	PABPC4	53	84.286	Ornithorhynchus_anatinus
ENSODEG00000013457	-	100	82.857	ENSORLG00000017479	pabpc4	53	82.857	Oryzias_latipes
ENSODEG00000013457	-	100	82.857	ENSORLG00020018644	pabpc4	55	82.857	Oryzias_latipes_hni
ENSODEG00000013457	-	100	82.857	ENSORLG00015015042	pabpc4	53	82.857	Oryzias_latipes_hsok
ENSODEG00000013457	-	100	82.857	ENSOMEG00000014410	pabpc4	55	82.857	Oryzias_melastigma
ENSODEG00000013457	-	100	85.714	ENSOGAG00000004067	PABPC4	51	85.714	Otolemur_garnettii
ENSODEG00000013457	-	100	85.714	ENSOARG00000020060	PABPC4	50	85.714	Ovis_aries
ENSODEG00000013457	-	100	85.714	ENSPPAG00000043625	PABPC4	53	85.714	Pan_paniscus
ENSODEG00000013457	-	100	85.714	ENSPPRG00000024727	PABPC4	53	85.714	Panthera_pardus
ENSODEG00000013457	-	100	85.714	ENSPTIG00000005829	PABPC4	53	85.714	Panthera_tigris_altaica
ENSODEG00000013457	-	100	85.714	ENSPTRG00000000573	PABPC4	53	85.714	Pan_troglodytes
ENSODEG00000013457	-	100	85.714	ENSPANG00000009484	PABPC4	53	85.714	Papio_anubis
ENSODEG00000013457	-	100	83.571	ENSPKIG00000025356	pabpc4	54	83.571	Paramormyrops_kingsleyae
ENSODEG00000013457	-	100	84.286	ENSPSIG00000016892	PABPC4	53	84.286	Pelodiscus_sinensis
ENSODEG00000013457	-	100	82.857	ENSPMGG00000009073	pabpc4	55	82.857	Periophthalmus_magnuspinnatus
ENSODEG00000013457	-	100	85.714	ENSPEMG00000023569	-	53	85.714	Peromyscus_maniculatus_bairdii
ENSODEG00000013457	-	100	85.000	ENSPEMG00000024193	-	52	85.000	Peromyscus_maniculatus_bairdii
ENSODEG00000013457	-	100	80.420	ENSPMAG00000002836	pabpc4	59	80.420	Petromyzon_marinus
ENSODEG00000013457	-	100	84.286	ENSPCIG00000020674	PABPC4	64	84.286	Phascolarctos_cinereus
ENSODEG00000013457	-	100	82.143	ENSPFOG00000002682	pabpc4	53	82.143	Poecilia_formosa
ENSODEG00000013457	-	100	82.143	ENSPLAG00000010112	pabpc4	53	82.143	Poecilia_latipinna
ENSODEG00000013457	-	100	82.143	ENSPMEG00000019739	pabpc4	53	82.143	Poecilia_mexicana
ENSODEG00000013457	-	100	82.143	ENSPREG00000001589	pabpc4	55	82.143	Poecilia_reticulata
ENSODEG00000013457	-	100	85.714	ENSPPYG00000001506	PABPC4	50	85.714	Pongo_abelii
ENSODEG00000013457	-	100	85.714	ENSPCOG00000023725	-	53	85.714	Propithecus_coquereli
ENSODEG00000013457	-	99	48.673	ENSPCOG00000025882	-	50	48.673	Propithecus_coquereli
ENSODEG00000013457	-	99	83.333	ENSPVAG00000002187	PABPC4	51	83.333	Pteropus_vampyrus
ENSODEG00000013457	-	100	82.857	ENSPNYG00000006134	pabpc4	53	82.857	Pundamilia_nyererei
ENSODEG00000013457	-	100	82.857	ENSPNAG00000024355	pabpc4	53	82.857	Pygocentrus_nattereri
ENSODEG00000013457	-	99	82.734	ENSRNOG00000028592	AABR07035074.1	51	82.734	Rattus_norvegicus
ENSODEG00000013457	-	100	85.000	ENSRNOG00000015642	Pabpc4	52	85.000	Rattus_norvegicus
ENSODEG00000013457	-	100	85.714	ENSRBIG00000039761	PABPC4	53	85.714	Rhinopithecus_bieti
ENSODEG00000013457	-	100	85.714	ENSRROG00000033355	PABPC4	53	85.714	Rhinopithecus_roxellana
ENSODEG00000013457	-	100	85.714	ENSSBOG00000026193	PABPC4	53	85.714	Saimiri_boliviensis_boliviensis
ENSODEG00000013457	-	100	84.286	ENSSHAG00000018139	PABPC4	53	84.286	Sarcophilus_harrisii
ENSODEG00000013457	-	100	82.857	ENSSFOG00015023514	pabpc4	54	82.857	Scleropages_formosus
ENSODEG00000013457	-	100	82.857	ENSSMAG00000009007	pabpc4	53	82.857	Scophthalmus_maximus
ENSODEG00000013457	-	100	82.857	ENSSDUG00000012683	pabpc4	58	82.857	Seriola_dumerili
ENSODEG00000013457	-	100	82.857	ENSSLDG00000013025	pabpc4	57	82.857	Seriola_lalandi_dorsalis
ENSODEG00000013457	-	100	83.571	ENSSPUG00000003204	PABPC4	53	83.571	Sphenodon_punctatus
ENSODEG00000013457	-	100	82.857	ENSSPAG00000009252	pabpc4	58	82.857	Stegastes_partitus
ENSODEG00000013457	-	100	85.714	ENSSSCG00000003660	-	53	85.714	Sus_scrofa
ENSODEG00000013457	-	100	84.286	ENSTGUG00000001266	PABPC4	50	84.286	Taeniopygia_guttata
ENSODEG00000013457	-	100	82.857	ENSTRUG00000005907	pabpc4	53	82.857	Takifugu_rubripes
ENSODEG00000013457	-	100	82.857	ENSTNIG00000016902	pabpc4	54	82.857	Tetraodon_nigroviridis
ENSODEG00000013457	-	100	85.714	ENSUAMG00000000303	PABPC4	53	85.714	Ursus_americanus
ENSODEG00000013457	-	100	85.714	ENSUMAG00000019585	PABPC4	63	85.714	Ursus_maritimus
ENSODEG00000013457	-	100	85.714	ENSVVUG00000005215	PABPC4	53	85.714	Vulpes_vulpes
ENSODEG00000013457	-	100	72.857	ENSXETG00000010946	pabpc4	53	72.857	Xenopus_tropicalis
ENSODEG00000013457	-	96	83.704	ENSXETG00000027221	-	80	83.704	Xenopus_tropicalis
ENSODEG00000013457	-	99	79.817	ENSXCOG00000013190	pabpc4	58	79.817	Xiphophorus_couchianus
ENSODEG00000013457	-	100	82.143	ENSXMAG00000019007	pabpc4	53	82.143	Xiphophorus_maculatus