EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013469 (Gene tree)
Gene ID: 101583698
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3558 bases
Position: chrJH651522.1:12159581-12163138
Accession: 101583698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018285	RRM_1	PF00076.22	8.7e-31	1	2
ENSODEP00000018285	RRM_1	PF00076.22	8.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018517	-	807	XM_004624750	ENSODEP00000018285	268 (aa)	XP_004624807	UPI000333C665

Gene Model

Click here to download ENSODEG00000013469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013469	-	60	45.509	ENSODEG00000011481	-	65	46.988
ENSODEG00000013469	-	100	94.776	ENSODEG00000000700	-	100	94.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013469	-	100	98.162	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSODEG00000013469	-	68	82.540	ENSAPOG00000008642	srsf5b	63	85.405	Acanthochromis_polyacanthus
ENSODEG00000013469	-	100	98.162	ENSAMEG00000014574	SRSF5	100	98.162	Ailuropoda_melanoleuca
ENSODEG00000013469	-	93	71.481	ENSACIG00000010742	srsf5b	81	75.969	Amphilophus_citrinellus
ENSODEG00000013469	-	68	82.540	ENSAOCG00000005719	srsf5b	63	85.405	Amphiprion_ocellaris
ENSODEG00000013469	-	68	82.540	ENSAPEG00000007830	srsf5b	63	85.405	Amphiprion_percula
ENSODEG00000013469	-	98	95.057	ENSAPLG00000014681	SRSF5	100	93.680	Anas_platyrhynchos
ENSODEG00000013469	-	100	96.654	ENSACAG00000005143	SRSF5	100	96.654	Anolis_carolinensis
ENSODEG00000013469	-	100	97.794	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSODEG00000013469	-	93	71.747	ENSACLG00000026424	srsf5b	63	82.162	Astatotilapia_calliptera
ENSODEG00000013469	-	68	82.703	ENSAMXG00000011932	srsf5b	84	80.000	Astyanax_mexicanus
ENSODEG00000013469	-	100	98.162	ENSBTAG00000011596	SRSF5	100	98.162	Bos_taurus
ENSODEG00000013469	-	100	98.162	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSODEG00000013469	-	100	98.162	ENSCAFG00000016589	SRSF5	100	98.162	Canis_familiaris
ENSODEG00000013469	-	100	98.162	ENSCAFG00020005661	SRSF5	100	98.162	Canis_lupus_dingo
ENSODEG00000013469	-	100	97.445	ENSCHIG00000016794	SRSF5	100	97.445	Capra_hircus
ENSODEG00000013469	-	88	94.515	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSODEG00000013469	-	100	96.715	ENSCAPG00000008801	SRSF5	100	96.715	Cavia_aperea
ENSODEG00000013469	-	100	96.715	ENSCPOG00000039926	SRSF5	100	96.715	Cavia_porcellus
ENSODEG00000013469	-	100	98.162	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSODEG00000013469	-	100	97.794	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSODEG00000013469	-	100	98.889	ENSCLAG00000004755	SRSF5	100	98.889	Chinchilla_lanigera
ENSODEG00000013469	-	100	98.162	ENSCSAG00000013041	SRSF5	100	98.162	Chlorocebus_sabaeus
ENSODEG00000013469	-	100	97.388	ENSCPBG00000021653	SRSF5	100	97.388	Chrysemys_picta_bellii
ENSODEG00000013469	-	100	98.162	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000013469	-	100	97.407	ENSCGRG00001015339	Srsf5	100	97.407	Cricetulus_griseus_chok1gshd
ENSODEG00000013469	-	100	97.778	ENSCGRG00000009833	Srsf5	100	97.778	Cricetulus_griseus_crigri
ENSODEG00000013469	-	88	74.016	ENSCSEG00000003801	srsf5b	64	82.353	Cynoglossus_semilaevis
ENSODEG00000013469	-	68	82.540	ENSCVAG00000017240	srsf5b	70	75.439	Cyprinodon_variegatus
ENSODEG00000013469	-	67	82.418	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSODEG00000013469	-	100	98.889	ENSDNOG00000006160	SRSF5	100	98.889	Dasypus_novemcinctus
ENSODEG00000013469	-	100	98.519	ENSDORG00000003989	Srsf5	100	98.519	Dipodomys_ordii
ENSODEG00000013469	-	100	85.185	ENSETEG00000020396	SRSF5	100	88.148	Echinops_telfairi
ENSODEG00000013469	-	68	64.865	ENSEBUG00000006229	srsf5b	68	65.730	Eptatretus_burgeri
ENSODEG00000013469	-	100	98.162	ENSEASG00005016615	SRSF5	100	98.162	Equus_asinus_asinus
ENSODEG00000013469	-	100	97.794	ENSECAG00000026873	SRSF5	100	97.794	Equus_caballus
ENSODEG00000013469	-	68	78.866	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
ENSODEG00000013469	-	100	98.162	ENSFCAG00000008848	SRSF5	99	100.000	Felis_catus
ENSODEG00000013469	-	89	94.142	ENSFALG00000004979	SRSF5	100	92.910	Ficedula_albicollis
ENSODEG00000013469	-	100	98.519	ENSFDAG00000011562	SRSF5	100	98.519	Fukomys_damarensis
ENSODEG00000013469	-	68	83.069	ENSFHEG00000009476	srsf5b	60	84.324	Fundulus_heteroclitus
ENSODEG00000013469	-	68	67.257	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
ENSODEG00000013469	-	100	95.522	ENSGALG00000009421	SRSF5	100	95.522	Gallus_gallus
ENSODEG00000013469	-	92	74.615	ENSGAFG00000002865	srsf5b	61	82.703	Gambusia_affinis
ENSODEG00000013469	-	67	61.134	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSODEG00000013469	-	100	97.388	ENSGAGG00000004447	SRSF5	100	97.388	Gopherus_agassizii
ENSODEG00000013469	-	100	98.162	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSODEG00000013469	-	68	81.481	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
ENSODEG00000013469	-	100	98.519	ENSHGLG00000010147	SRSF5	100	98.519	Heterocephalus_glaber_female
ENSODEG00000013469	-	100	98.519	ENSHGLG00100015328	SRSF5	100	98.519	Heterocephalus_glaber_male
ENSODEG00000013469	-	100	66.790	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSODEG00000013469	-	68	75.521	ENSHCOG00000005592	srsf5b	64	77.128	Hippocampus_comes
ENSODEG00000013469	-	100	98.889	ENSSTOG00000020672	SRSF5	100	98.889	Ictidomys_tridecemlineatus
ENSODEG00000013469	-	100	97.059	ENSJJAG00000001688	Srsf5	100	97.059	Jaculus_jaculus
ENSODEG00000013469	-	68	82.888	ENSKMAG00000020486	srsf5b	85	77.519	Kryptolebias_marmoratus
ENSODEG00000013469	-	68	82.723	ENSLBEG00000013647	srsf5b	63	82.353	Labrus_bergylta
ENSODEG00000013469	-	67	90.055	ENSLACG00000005874	SRSF5	67	90.608	Latimeria_chalumnae
ENSODEG00000013469	-	100	69.818	ENSLOCG00000012438	srsf5b	69	82.703	Lepisosteus_oculatus
ENSODEG00000013469	-	100	97.426	ENSLAFG00000005260	SRSF5	100	97.426	Loxodonta_africana
ENSODEG00000013469	-	100	98.162	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSODEG00000013469	-	100	98.162	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSODEG00000013469	-	100	97.794	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSODEG00000013469	-	87	75.510	ENSMAMG00000002673	srsf5b	63	80.978	Mastacembelus_armatus
ENSODEG00000013469	-	93	71.747	ENSMZEG00005003550	srsf5b	63	82.162	Maylandia_zebra
ENSODEG00000013469	-	75	81.000	ENSMGAG00000011835	SRSF5	100	90.393	Meleagris_gallopavo
ENSODEG00000013469	-	100	97.778	ENSMAUG00000009544	Srsf5	100	97.778	Mesocricetus_auratus
ENSODEG00000013469	-	100	98.519	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSODEG00000013469	-	100	97.407	ENSMOCG00000013134	Srsf5	100	97.407	Microtus_ochrogaster
ENSODEG00000013469	-	67	81.622	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
ENSODEG00000013469	-	100	97.761	ENSMODG00000011362	SRSF5	100	97.761	Monodelphis_domestica
ENSODEG00000013469	-	68	83.684	ENSMALG00000021875	srsf5b	84	75.194	Monopterus_albus
ENSODEG00000013469	-	100	97.778	ENSMUSG00000021134	Srsf5	100	97.778	Mus_musculus
ENSODEG00000013469	-	100	97.778	MGP_PahariEiJ_G0029659	Srsf5	100	97.778	Mus_pahari
ENSODEG00000013469	-	100	98.162	ENSMPUG00000007458	SRSF5	100	98.162	Mustela_putorius_furo
ENSODEG00000013469	-	67	100.000	ENSMLUG00000011939	SRSF5	64	100.000	Myotis_lucifugus
ENSODEG00000013469	-	100	98.148	ENSNGAG00000010073	-	100	98.148	Nannospalax_galili
ENSODEG00000013469	-	93	71.004	ENSNBRG00000001285	srsf5b	63	81.283	Neolamprologus_brichardi
ENSODEG00000013469	-	100	98.162	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSODEG00000013469	-	70	100.000	ENSMEUG00000001521	SRSF5	70	100.000	Notamacropus_eugenii
ENSODEG00000013469	-	67	100.000	ENSOPRG00000008286	SRSF5	64	100.000	Ochotona_princeps
ENSODEG00000013469	-	93	71.747	ENSONIG00000005759	srsf5b	63	82.162	Oreochromis_niloticus
ENSODEG00000013469	-	67	93.296	ENSOANG00000013336	SRSF5	67	93.296	Ornithorhynchus_anatinus
ENSODEG00000013469	-	100	96.377	ENSOCUG00000009274	SRSF5	100	96.377	Oryctolagus_cuniculus
ENSODEG00000013469	-	68	78.534	ENSORLG00000029854	srsf5b	58	80.214	Oryzias_latipes
ENSODEG00000013469	-	93	70.149	ENSORLG00015001720	srsf5b	63	81.818	Oryzias_latipes_hsok
ENSODEG00000013469	-	100	98.519	ENSOGAG00000015122	SRSF5	100	98.519	Otolemur_garnettii
ENSODEG00000013469	-	100	98.162	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSODEG00000013469	-	100	98.162	ENSPPRG00000012903	SRSF5	99	100.000	Panthera_pardus
ENSODEG00000013469	-	100	98.162	ENSPTIG00000018589	SRSF5	99	100.000	Panthera_tigris_altaica
ENSODEG00000013469	-	100	98.162	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSODEG00000013469	-	100	97.794	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSODEG00000013469	-	100	97.015	ENSPSIG00000012522	SRSF5	100	97.015	Pelodiscus_sinensis
ENSODEG00000013469	-	100	97.407	ENSPEMG00000020173	Srsf5	100	97.407	Peromyscus_maniculatus_bairdii
ENSODEG00000013469	-	99	52.000	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
ENSODEG00000013469	-	100	97.761	ENSPCIG00000011877	SRSF5	100	97.761	Phascolarctos_cinereus
ENSODEG00000013469	-	92	73.180	ENSPFOG00000017700	srsf5b	61	84.865	Poecilia_formosa
ENSODEG00000013469	-	92	72.901	ENSPLAG00000006480	srsf5b	61	84.409	Poecilia_latipinna
ENSODEG00000013469	-	92	73.180	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
ENSODEG00000013469	-	92	74.615	ENSPREG00000010381	srsf5b	61	82.162	Poecilia_reticulata
ENSODEG00000013469	-	100	98.162	ENSPPYG00000005945	SRSF5	100	98.162	Pongo_abelii
ENSODEG00000013469	-	54	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSODEG00000013469	-	100	98.889	ENSPCOG00000014442	SRSF5	100	98.889	Propithecus_coquereli
ENSODEG00000013469	-	67	68.156	ENSPVAG00000009828	SRSF5	100	76.838	Pteropus_vampyrus
ENSODEG00000013469	-	93	67.557	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSODEG00000013469	-	68	82.162	ENSPNAG00000011262	srsf5b	84	79.200	Pygocentrus_nattereri
ENSODEG00000013469	-	100	97.407	ENSRNOG00000005513	Srsf5	100	97.407	Rattus_norvegicus
ENSODEG00000013469	-	100	98.162	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSODEG00000013469	-	100	98.162	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSODEG00000013469	-	100	98.162	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000013469	-	100	97.761	ENSSHAG00000002871	SRSF5	100	97.761	Sarcophilus_harrisii
ENSODEG00000013469	-	68	77.723	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
ENSODEG00000013469	-	96	72.222	ENSSDUG00000005766	srsf5b	65	82.703	Seriola_dumerili
ENSODEG00000013469	-	93	73.384	ENSSLDG00000023255	srsf5b	84	74.219	Seriola_lalandi_dorsalis
ENSODEG00000013469	-	100	85.185	ENSSARG00000001059	SRSF5	100	89.259	Sorex_araneus
ENSODEG00000013469	-	100	93.141	ENSSPUG00000002464	SRSF5	100	93.141	Sphenodon_punctatus
ENSODEG00000013469	-	68	82.011	ENSSPAG00000015325	srsf5b	63	84.865	Stegastes_partitus
ENSODEG00000013469	-	100	97.426	ENSSSCG00000032583	SRSF5	100	97.426	Sus_scrofa
ENSODEG00000013469	-	89	94.979	ENSTGUG00000011425	SRSF5	100	93.657	Taeniopygia_guttata
ENSODEG00000013469	-	68	83.333	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
ENSODEG00000013469	-	100	64.748	ENSTNIG00000016411	srsf5b	66	84.153	Tetraodon_nigroviridis
ENSODEG00000013469	-	100	88.406	ENSTBEG00000001972	SRSF5	100	92.029	Tupaia_belangeri
ENSODEG00000013469	-	99	97.436	ENSTTRG00000003318	SRSF5	100	97.436	Tursiops_truncatus
ENSODEG00000013469	-	100	98.162	ENSUAMG00000014184	SRSF5	100	98.162	Ursus_americanus
ENSODEG00000013469	-	100	97.794	ENSUMAG00000009827	SRSF5	100	97.794	Ursus_maritimus
ENSODEG00000013469	-	100	98.889	ENSVPAG00000006448	SRSF5	100	98.889	Vicugna_pacos
ENSODEG00000013469	-	100	98.162	ENSVVUG00000003790	SRSF5	100	98.162	Vulpes_vulpes
ENSODEG00000013469	-	94	81.923	ENSXETG00000002211	srsf5	67	92.308	Xenopus_tropicalis
ENSODEG00000013469	-	92	68.898	ENSXCOG00000001570	srsf5b	63	84.409	Xiphophorus_couchianus
ENSODEG00000013469	-	92	73.180	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus