EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013508 (Gene tree)
Gene ID: 101583547
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 14158 bases
Position: chrJH651516.1:7382963-7397120
Accession: 101583547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018329	eIF-3c_N	PF05470.12	3.8e-272	1	2
ENSODEP00000018329	eIF-3c_N	PF05470.12	3.8e-272	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018561	-	2990	XM_004622929	ENSODEP00000018329	913 (aa)	XP_023575091	UPI000333D3FE

Gene Model

Click here to download ENSODEG00000013508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013508	-	100	97.809	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSODEG00000013508	-	100	97.702	ENSG00000205609	EIF3CL	100	97.702	Homo_sapiens
ENSODEG00000013508	-	99	76.496	ENSAPOG00000024092	eif3c	92	84.502	Acanthochromis_polyacanthus
ENSODEG00000013508	-	100	98.357	ENSAMEG00000015454	-	100	98.357	Ailuropoda_melanoleuca
ENSODEG00000013508	-	99	73.707	ENSACIG00000015082	eif3c	93	84.053	Amphilophus_citrinellus
ENSODEG00000013508	-	94	84.323	ENSAOCG00000021466	eif3c	94	84.323	Amphiprion_ocellaris
ENSODEG00000013508	-	94	84.323	ENSAPEG00000010521	eif3c	94	84.323	Amphiprion_percula
ENSODEG00000013508	-	99	76.381	ENSATEG00000019001	eif3c	98	76.413	Anabas_testudineus
ENSODEG00000013508	-	100	86.681	ENSACAG00000005937	-	100	86.354	Anolis_carolinensis
ENSODEG00000013508	-	100	97.700	ENSANAG00000020640	-	100	97.700	Aotus_nancymaae
ENSODEG00000013508	-	84	80.782	ENSACLG00000009322	eif3c	92	80.782	Astatotilapia_calliptera
ENSODEG00000013508	-	84	83.636	ENSACLG00000009347	eif3c	90	83.142	Astatotilapia_calliptera
ENSODEG00000013508	-	99	76.264	ENSAMXG00000020949	eif3c	100	75.215	Astyanax_mexicanus
ENSODEG00000013508	-	100	97.700	ENSBTAG00000006543	EIF3CL	100	97.700	Bos_taurus
ENSODEG00000013508	-	95	42.601	WBGene00001226	eif-3.C	66	46.753	Caenorhabditis_elegans
ENSODEG00000013508	-	100	97.590	ENSCJAG00000006341	-	100	97.590	Callithrix_jacchus
ENSODEG00000013508	-	100	98.138	ENSCAFG00000017143	-	100	98.138	Canis_familiaris
ENSODEG00000013508	-	100	98.248	ENSCAFG00020017587	-	100	98.248	Canis_lupus_dingo
ENSODEG00000013508	-	100	97.809	ENSCHIG00000024795	-	100	97.809	Capra_hircus
ENSODEG00000013508	-	100	97.590	ENSTSYG00000003486	-	100	97.590	Carlito_syrichta
ENSODEG00000013508	-	96	89.354	ENSCAPG00000015887	-	100	89.241	Cavia_aperea
ENSODEG00000013508	-	100	98.795	ENSCPOG00000007533	-	100	98.795	Cavia_porcellus
ENSODEG00000013508	-	100	96.605	ENSCCAG00000034928	-	100	96.605	Cebus_capucinus
ENSODEG00000013508	-	99	82.637	ENSCCAG00000029099	-	99	81.429	Cebus_capucinus
ENSODEG00000013508	-	100	92.333	ENSCCAG00000027724	-	100	91.566	Cebus_capucinus
ENSODEG00000013508	-	100	97.700	ENSCATG00000032673	-	100	97.700	Cercocebus_atys
ENSODEG00000013508	-	100	98.357	ENSCLAG00000011094	-	100	98.357	Chinchilla_lanigera
ENSODEG00000013508	-	100	97.700	ENSCSAG00000006297	-	100	97.700	Chlorocebus_sabaeus
ENSODEG00000013508	-	55	81.853	ENSCHOG00000003120	-	88	81.853	Choloepus_hoffmanni
ENSODEG00000013508	-	71	92.038	ENSCPBG00000012407	-	94	79.271	Chrysemys_picta_bellii
ENSODEG00000013508	-	79	56.164	ENSCSAVG00000006744	-	90	57.391	Ciona_savignyi
ENSODEG00000013508	-	100	97.700	ENSCANG00000033626	-	100	97.700	Colobus_angolensis_palliatus
ENSODEG00000013508	-	100	97.262	ENSCGRG00001015265	EIF3C	100	97.262	Cricetulus_griseus_chok1gshd
ENSODEG00000013508	-	100	74.782	ENSCSEG00000017770	eif3c	100	74.429	Cynoglossus_semilaevis
ENSODEG00000013508	-	99	75.599	ENSCVAG00000005402	eif3c	98	75.926	Cyprinodon_variegatus
ENSODEG00000013508	-	99	76.035	ENSDARG00000016443	eif3c	98	75.843	Danio_rerio
ENSODEG00000013508	-	100	97.919	ENSDNOG00000031497	-	100	97.919	Dasypus_novemcinctus
ENSODEG00000013508	-	100	98.795	ENSDORG00000016471	Eif3c	100	98.795	Dipodomys_ordii
ENSODEG00000013508	-	66	57.355	FBgn0034258	eIF3c	63	57.458	Drosophila_melanogaster
ENSODEG00000013508	-	92	97.706	ENSETEG00000013527	-	92	97.706	Echinops_telfairi
ENSODEG00000013508	-	99	62.983	ENSEBUG00000001629	eif3c	99	63.294	Eptatretus_burgeri
ENSODEG00000013508	-	100	98.138	ENSECAG00000008746	-	100	98.138	Equus_caballus
ENSODEG00000013508	-	64	64.286	ENSEEUG00000000726	-	64	64.286	Erinaceus_europaeus
ENSODEG00000013508	-	87	97.368	ENSEEUG00000006148	-	100	97.368	Erinaceus_europaeus
ENSODEG00000013508	-	99	75.517	ENSELUG00000022257	eif3c	92	83.582	Esox_lucius
ENSODEG00000013508	-	100	98.138	ENSFCAG00000015782	-	100	98.138	Felis_catus
ENSODEG00000013508	-	100	98.467	ENSFDAG00000003588	-	100	98.467	Fukomys_damarensis
ENSODEG00000013508	-	99	76.439	ENSFHEG00000014154	EIF3C	93	83.824	Fundulus_heteroclitus
ENSODEG00000013508	-	97	74.552	ENSGMOG00000016885	eif3c	99	74.776	Gadus_morhua
ENSODEG00000013508	-	96	76.644	ENSGACG00000007652	eif3c	100	75.354	Gasterosteus_aculeatus
ENSODEG00000013508	-	92	84.179	ENSGAGG00000006666	-	100	83.353	Gopherus_agassizii
ENSODEG00000013508	-	99	95.270	ENSGGOG00000026919	EIF3C	100	97.497	Gorilla_gorilla
ENSODEG00000013508	-	54	97.297	ENSGGOG00000022677	-	100	97.297	Gorilla_gorilla
ENSODEG00000013508	-	100	98.357	ENSHGLG00000011445	EIF3C	100	98.357	Heterocephalus_glaber_female
ENSODEG00000013508	-	100	98.357	ENSHGLG00100000217	EIF3C	100	98.357	Heterocephalus_glaber_male
ENSODEG00000013508	-	99	76.113	ENSHCOG00000019694	eif3c	99	75.952	Hippocampus_comes
ENSODEG00000013508	-	99	75.599	ENSIPUG00000016878	eif3c	98	75.926	Ictalurus_punctatus
ENSODEG00000013508	-	100	98.357	ENSSTOG00000021278	-	100	98.357	Ictidomys_tridecemlineatus
ENSODEG00000013508	-	100	97.371	ENSJJAG00000012722	Eif3c	100	97.371	Jaculus_jaculus
ENSODEG00000013508	-	99	76.619	ENSKMAG00000021662	eif3c	98	75.297	Kryptolebias_marmoratus
ENSODEG00000013508	-	99	75.249	ENSLBEG00000023370	eif3c	99	75.000	Labrus_bergylta
ENSODEG00000013508	-	100	78.626	ENSLACG00000000770	eif3c	100	80.087	Latimeria_chalumnae
ENSODEG00000013508	-	100	97.371	ENSLAFG00000027426	-	100	97.371	Loxodonta_africana
ENSODEG00000013508	-	100	97.700	ENSMFAG00000041930	-	100	97.700	Macaca_fascicularis
ENSODEG00000013508	-	100	97.700	ENSMMUG00000011798	-	100	97.700	Macaca_mulatta
ENSODEG00000013508	-	100	97.700	ENSMNEG00000023915	-	100	97.700	Macaca_nemestrina
ENSODEG00000013508	-	100	97.700	ENSMLEG00000027529	-	100	97.700	Mandrillus_leucophaeus
ENSODEG00000013508	-	99	76.319	ENSMAMG00000012512	eif3c	95	84.833	Mastacembelus_armatus
ENSODEG00000013508	-	84	83.636	ENSMZEG00005013699	eif3c	90	83.142	Maylandia_zebra
ENSODEG00000013508	-	84	80.945	ENSMZEG00005013685	eif3c	92	80.945	Maylandia_zebra
ENSODEG00000013508	-	100	97.152	ENSMAUG00000010621	Eif3c	100	97.152	Mesocricetus_auratus
ENSODEG00000013508	-	100	98.138	ENSMICG00000036748	-	100	98.138	Microcebus_murinus
ENSODEG00000013508	-	100	95.071	ENSMOCG00000004204	Eif3c	100	95.071	Microtus_ochrogaster
ENSODEG00000013508	-	100	72.210	ENSMMOG00000001572	eif3c	72	82.838	Mola_mola
ENSODEG00000013508	-	100	94.639	ENSMODG00000015579	-	100	94.639	Monodelphis_domestica
ENSODEG00000013508	-	84	84.743	ENSMALG00000008907	eif3c	92	84.603	Monopterus_albus
ENSODEG00000013508	-	100	96.824	MGP_CAROLIEiJ_G0030451	Eif3c	100	96.824	Mus_caroli
ENSODEG00000013508	-	100	96.824	ENSMUSG00000030738	Eif3c	100	96.824	Mus_musculus
ENSODEG00000013508	-	100	96.386	MGP_PahariEiJ_G0013661	Eif3c	100	96.386	Mus_pahari
ENSODEG00000013508	-	100	96.824	MGP_SPRETEiJ_G0031565	Eif3c	100	96.824	Mus_spretus
ENSODEG00000013508	-	96	97.614	ENSMPUG00000012732	-	100	97.614	Mustela_putorius_furo
ENSODEG00000013508	-	100	97.590	ENSMLUG00000015558	-	100	97.590	Myotis_lucifugus
ENSODEG00000013508	-	100	98.248	ENSNGAG00000007177	-	100	98.248	Nannospalax_galili
ENSODEG00000013508	-	93	87.273	ENSNGAG00000010901	-	89	87.273	Nannospalax_galili
ENSODEG00000013508	-	100	82.524	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSODEG00000013508	-	100	77.377	ENSMEUG00000009939	-	99	77.620	Notamacropus_eugenii
ENSODEG00000013508	-	88	62.420	ENSMEUG00000005317	-	94	72.414	Notamacropus_eugenii
ENSODEG00000013508	-	100	97.809	ENSOPRG00000000931	-	100	97.809	Ochotona_princeps
ENSODEG00000013508	-	66	63.366	ENSONIG00000011434	eif3c	99	63.366	Oreochromis_niloticus
ENSODEG00000013508	-	100	90.948	ENSOANG00000011410	-	100	90.948	Ornithorhynchus_anatinus
ENSODEG00000013508	-	100	98.467	ENSOCUG00000022489	-	100	98.467	Oryctolagus_cuniculus
ENSODEG00000013508	-	99	75.055	ENSORLG00000006318	eif3c	96	73.965	Oryzias_latipes
ENSODEG00000013508	-	99	75.055	ENSORLG00020015713	eif3c	92	82.441	Oryzias_latipes_hni
ENSODEG00000013508	-	99	75.166	ENSORLG00015013772	eif3c	98	74.179	Oryzias_latipes_hsok
ENSODEG00000013508	-	100	74.651	ENSOMEG00000020450	eif3c	100	74.114	Oryzias_melastigma
ENSODEG00000013508	-	100	98.028	ENSOGAG00000012737	-	100	98.028	Otolemur_garnettii
ENSODEG00000013508	-	100	97.809	ENSOARG00000002892	-	100	97.809	Ovis_aries
ENSODEG00000013508	-	100	98.138	ENSPPRG00000012336	-	100	98.138	Panthera_pardus
ENSODEG00000013508	-	100	98.138	ENSPTIG00000011712	-	100	98.138	Panthera_tigris_altaica
ENSODEG00000013508	-	100	97.700	ENSPANG00000021151	-	100	97.700	Papio_anubis
ENSODEG00000013508	-	99	76.580	ENSPKIG00000002049	eif3c	98	76.797	Paramormyrops_kingsleyae
ENSODEG00000013508	-	89	84.909	ENSPMGG00000005409	eif3c	94	84.909	Periophthalmus_magnuspinnatus
ENSODEG00000013508	-	100	95.947	ENSPEMG00000010899	Eif3c	100	95.947	Peromyscus_maniculatus_bairdii
ENSODEG00000013508	-	100	94.748	ENSPCIG00000025206	-	100	94.748	Phascolarctos_cinereus
ENSODEG00000013508	-	99	75.761	ENSPFOG00000004476	eif3c	98	75.217	Poecilia_formosa
ENSODEG00000013508	-	100	71.444	ENSPLAG00000017480	eif3c	98	75.294	Poecilia_latipinna
ENSODEG00000013508	-	99	76.387	ENSPMEG00000019512	eif3c	98	75.517	Poecilia_mexicana
ENSODEG00000013508	-	100	94.414	ENSPPYG00000007227	-	100	94.524	Pongo_abelii
ENSODEG00000013508	-	66	98.170	ENSPCAG00000012710	-	100	98.170	Procavia_capensis
ENSODEG00000013508	-	100	98.357	ENSPCOG00000019289	-	100	98.357	Propithecus_coquereli
ENSODEG00000013508	-	100	97.809	ENSPVAG00000005804	-	100	97.809	Pteropus_vampyrus
ENSODEG00000013508	-	50	81.212	ENSPNYG00000016530	eif3c	82	81.212	Pundamilia_nyererei
ENSODEG00000013508	-	99	76.477	ENSPNAG00000024040	eif3c	99	76.721	Pygocentrus_nattereri
ENSODEG00000013508	-	100	96.714	ENSRNOG00000018761	Eif3c	100	96.714	Rattus_norvegicus
ENSODEG00000013508	-	97	97.735	ENSRBIG00000044009	-	98	95.312	Rhinopithecus_bieti
ENSODEG00000013508	-	100	97.700	ENSRROG00000043626	-	100	97.700	Rhinopithecus_roxellana
ENSODEG00000013508	-	75	31.365	YMR309C	-	81	30.699	Saccharomyces_cerevisiae
ENSODEG00000013508	-	100	97.481	ENSSBOG00000032155	-	100	97.481	Saimiri_boliviensis_boliviensis
ENSODEG00000013508	-	96	94.337	ENSSHAG00000011808	-	100	94.337	Sarcophilus_harrisii
ENSODEG00000013508	-	99	75.847	ENSSFOG00015021823	eif3c	98	76.451	Scleropages_formosus
ENSODEG00000013508	-	97	76.966	ENSSMAG00000016638	eif3c	97	76.629	Scophthalmus_maximus
ENSODEG00000013508	-	97	79.416	ENSSDUG00000023117	eif3c	98	76.253	Seriola_dumerili
ENSODEG00000013508	-	99	76.471	ENSSLDG00000009706	eif3c	93	83.824	Seriola_lalandi_dorsalis
ENSODEG00000013508	-	100	83.825	ENSSPUG00000016470	-	100	84.481	Sphenodon_punctatus
ENSODEG00000013508	-	100	76.304	ENSSPAG00000000426	eif3c	100	75.761	Stegastes_partitus
ENSODEG00000013508	-	100	98.357	ENSSSCG00000034927	-	100	98.357	Sus_scrofa
ENSODEG00000013508	-	100	74.332	ENSTRUG00000008951	eif3c	99	74.011	Takifugu_rubripes
ENSODEG00000013508	-	100	74.239	ENSTNIG00000015210	eif3c	100	74.022	Tetraodon_nigroviridis
ENSODEG00000013508	-	100	98.028	ENSTTRG00000005880	-	100	98.028	Tursiops_truncatus
ENSODEG00000013508	-	72	98.626	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSODEG00000013508	-	100	98.248	ENSUMAG00000010927	-	100	98.248	Ursus_maritimus
ENSODEG00000013508	-	100	96.714	ENSVVUG00000025970	-	100	96.714	Vulpes_vulpes
ENSODEG00000013508	-	100	78.294	ENSXETG00000002941	eif3c	100	78.402	Xenopus_tropicalis
ENSODEG00000013508	-	100	75.676	ENSXMAG00000013796	eif3c	100	74.946	Xiphophorus_maculatus