EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013529 (Gene tree)
Gene ID: 101588906
Gene Symbol: -
Alias: -
Full Name: ribosome production factor 2 homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 39112 bases
Position: chrJH651605.1:10171933-10211044
Accession: 101588906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018363	Brix	PF04427.18	1.3e-44	1	1
ENSODEP00000018361	Brix	PF04427.18	7.1e-37	1	1
ENSODEP00000018362	Brix	PF04427.18	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018593	-	771	-	ENSODEP00000018361	257 (aa)	-	-
ENSODET00000018595	-	931	XM_012516070	ENSODEP00000018363	306 (aa)	XP_012371524	-
ENSODET00000018594	-	615	-	ENSODEP00000018362	205 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013529	-	93	82.520	ENSODEG00000006939	-	96	82.520
ENSODEG00000013529	-	97	78.523	ENSODEG00000002442	-	97	78.523
ENSODEG00000013529	-	96	79.457	ENSODEG00000003531	-	100	80.727
ENSODEG00000013529	-	97	86.913	ENSODEG00000006584	-	97	86.913
ENSODEG00000013529	-	97	94.631	ENSODEG00000019144	-	97	94.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013529	-	97	95.973	ENSG00000197498	RPF2	100	97.664	Homo_sapiens
ENSODEG00000013529	-	100	77.043	ENSAPOG00000005714	rpf2	96	75.254	Acanthochromis_polyacanthus
ENSODEG00000013529	-	97	95.638	ENSAMEG00000015753	RPF2	97	95.638	Ailuropoda_melanoleuca
ENSODEG00000013529	-	55	76.761	ENSACIG00000006659	rpf2	97	69.753	Amphilophus_citrinellus
ENSODEG00000013529	-	96	74.915	ENSAOCG00000005173	rpf2	96	74.915	Amphiprion_ocellaris
ENSODEG00000013529	-	96	74.915	ENSAPEG00000004003	rpf2	96	74.915	Amphiprion_percula
ENSODEG00000013529	-	97	73.579	ENSATEG00000012818	rpf2	97	73.579	Anabas_testudineus
ENSODEG00000013529	-	96	77.656	ENSAPLG00000008812	RPF2	97	86.038	Anas_platyrhynchos
ENSODEG00000013529	-	96	81.570	ENSACAG00000011270	RPF2	95	81.570	Anolis_carolinensis
ENSODEG00000013529	-	100	91.209	ENSANAG00000026549	-	97	91.946	Aotus_nancymaae
ENSODEG00000013529	-	97	76.510	ENSANAG00000033736	-	97	77.517	Aotus_nancymaae
ENSODEG00000013529	-	97	87.584	ENSANAG00000034834	-	97	87.584	Aotus_nancymaae
ENSODEG00000013529	-	96	72.203	ENSANAG00000021067	-	95	71.186	Aotus_nancymaae
ENSODEG00000013529	-	95	81.600	ENSANAG00000025459	-	95	74.812	Aotus_nancymaae
ENSODEG00000013529	-	100	69.203	ENSAMXG00000035201	rpf2	91	75.269	Astyanax_mexicanus
ENSODEG00000013529	-	97	95.302	ENSBTAG00000016584	RPF2	97	95.302	Bos_taurus
ENSODEG00000013529	-	98	39.785	WBGene00021830	Y54E10A.10	95	43.060	Caenorhabditis_elegans
ENSODEG00000013529	-	100	96.887	ENSCJAG00000038330	RPF2	99	95.851	Callithrix_jacchus
ENSODEG00000013529	-	97	94.966	ENSCAFG00000003918	RPF2	97	94.966	Canis_familiaris
ENSODEG00000013529	-	100	90.110	ENSCHIG00000022499	RPF2	97	90.268	Capra_hircus
ENSODEG00000013529	-	97	91.946	ENSTSYG00000013924	RPF2	97	91.946	Carlito_syrichta
ENSODEG00000013529	-	100	80.303	ENSCAPG00000014257	RPF2	97	76.846	Cavia_aperea
ENSODEG00000013529	-	100	98.444	ENSCPOG00000006797	RPF2	100	98.444	Cavia_porcellus
ENSODEG00000013529	-	99	66.192	ENSCCAG00000028553	-	95	72.759	Cebus_capucinus
ENSODEG00000013529	-	95	76.897	ENSCCAG00000028906	-	96	81.659	Cebus_capucinus
ENSODEG00000013529	-	97	93.960	ENSCCAG00000030365	-	97	93.960	Cebus_capucinus
ENSODEG00000013529	-	97	95.973	ENSCCAG00000030864	-	97	95.973	Cebus_capucinus
ENSODEG00000013529	-	94	70.480	ENSCATG00000029725	-	98	83.673	Cercocebus_atys
ENSODEG00000013529	-	97	75.839	ENSCATG00000034352	-	97	75.839	Cercocebus_atys
ENSODEG00000013529	-	100	98.833	ENSCLAG00000010393	-	100	98.833	Chinchilla_lanigera
ENSODEG00000013529	-	89	72.161	ENSCLAG00000013252	-	100	72.161	Chinchilla_lanigera
ENSODEG00000013529	-	97	80.858	ENSCLAG00000010874	-	100	79.538	Chinchilla_lanigera
ENSODEG00000013529	-	97	89.899	ENSCHOG00000005865	RPF2	97	89.899	Choloepus_hoffmanni
ENSODEG00000013529	-	94	86.505	ENSCPBG00000006504	RPF2	94	86.505	Chrysemys_picta_bellii
ENSODEG00000013529	-	92	59.643	ENSCING00000008090	-	95	58.163	Ciona_intestinalis
ENSODEG00000013529	-	92	58.657	ENSCSAVG00000010672	-	95	58.657	Ciona_savignyi
ENSODEG00000013529	-	97	95.973	ENSCANG00000030665	RPF2	97	95.973	Colobus_angolensis_palliatus
ENSODEG00000013529	-	99	92.384	ENSCGRG00001007331	-	97	93.624	Cricetulus_griseus_chok1gshd
ENSODEG00000013529	-	96	75.850	ENSCGRG00001005262	-	94	75.850	Cricetulus_griseus_chok1gshd
ENSODEG00000013529	-	100	94.163	ENSCGRG00000006083	Rpf2	100	94.163	Cricetulus_griseus_crigri
ENSODEG00000013529	-	95	73.793	ENSCSEG00000015725	rpf2	96	73.793	Cynoglossus_semilaevis
ENSODEG00000013529	-	100	73.180	ENSCVAG00000001072	rpf2	97	73.401	Cyprinodon_variegatus
ENSODEG00000013529	-	97	70.805	ENSDARG00000043960	rpf2	97	70.805	Danio_rerio
ENSODEG00000013529	-	70	95.580	ENSDNOG00000039270	RPF2	99	93.596	Dasypus_novemcinctus
ENSODEG00000013529	-	100	78.049	ENSDORG00000026915	Rpf2	95	95.833	Dipodomys_ordii
ENSODEG00000013529	-	99	42.908	FBgn0038585	Non3	92	47.440	Drosophila_melanogaster
ENSODEG00000013529	-	91	55.755	ENSEBUG00000003640	rpf2	84	55.755	Eptatretus_burgeri
ENSODEG00000013529	-	51	86.154	ENSEASG00005002363	-	99	83.660	Equus_asinus_asinus
ENSODEG00000013529	-	100	88.929	ENSEASG00005006927	-	97	90.604	Equus_asinus_asinus
ENSODEG00000013529	-	94	96.540	ENSECAG00000017121	RPF2	97	95.302	Equus_caballus
ENSODEG00000013529	-	97	77.181	ENSEEUG00000006169	RPF2	100	77.181	Erinaceus_europaeus
ENSODEG00000013529	-	100	67.491	ENSELUG00000018518	rpf2	92	76.344	Esox_lucius
ENSODEG00000013529	-	97	94.966	ENSFCAG00000001527	RPF2	97	94.966	Felis_catus
ENSODEG00000013529	-	97	85.185	ENSFALG00000010816	RPF2	97	85.185	Ficedula_albicollis
ENSODEG00000013529	-	100	98.054	ENSFDAG00000005811	-	100	98.054	Fukomys_damarensis
ENSODEG00000013529	-	95	79.920	ENSFDAG00000016721	-	100	79.920	Fukomys_damarensis
ENSODEG00000013529	-	96	74.237	ENSFHEG00000011243	rpf2	96	74.237	Fundulus_heteroclitus
ENSODEG00000013529	-	97	63.273	ENSGMOG00000002521	rpf2	98	61.092	Gadus_morhua
ENSODEG00000013529	-	97	84.175	ENSGALG00000037087	RPF2	97	84.175	Gallus_gallus
ENSODEG00000013529	-	97	73.737	ENSGAFG00000009537	rpf2	97	73.737	Gambusia_affinis
ENSODEG00000013529	-	94	75.779	ENSGACG00000006507	rpf2	94	75.779	Gasterosteus_aculeatus
ENSODEG00000013529	-	100	81.387	ENSGAGG00000016221	RPF2	94	82.007	Gopherus_agassizii
ENSODEG00000013529	-	97	79.195	ENSGGOG00000001469	RPF2	97	78.859	Gorilla_gorilla
ENSODEG00000013529	-	100	79.152	ENSGGOG00000024187	-	97	87.770	Gorilla_gorilla
ENSODEG00000013529	-	96	74.915	ENSHBUG00000021805	rpf2	96	74.915	Haplochromis_burtoni
ENSODEG00000013529	-	92	90.357	ENSHGLG00000012697	-	97	90.357	Heterocephalus_glaber_female
ENSODEG00000013529	-	96	86.395	ENSHGLG00000012500	-	77	87.415	Heterocephalus_glaber_female
ENSODEG00000013529	-	100	96.887	ENSHGLG00000001322	RPF2	100	96.887	Heterocephalus_glaber_female
ENSODEG00000013529	-	96	86.054	ENSHGLG00100012473	-	94	87.075	Heterocephalus_glaber_male
ENSODEG00000013529	-	99	87.891	ENSHGLG00100002981	-	98	87.891	Heterocephalus_glaber_male
ENSODEG00000013529	-	92	90.357	ENSHGLG00100000462	-	97	90.357	Heterocephalus_glaber_male
ENSODEG00000013529	-	89	80.515	ENSHGLG00100009310	-	100	80.147	Heterocephalus_glaber_male
ENSODEG00000013529	-	100	96.887	ENSHGLG00100012131	RPF2	100	96.887	Heterocephalus_glaber_male
ENSODEG00000013529	-	96	74.915	ENSHCOG00000000225	rpf2	97	74.915	Hippocampus_comes
ENSODEG00000013529	-	92	67.021	ENSIPUG00000016288	rpf2	87	95.238	Ictalurus_punctatus
ENSODEG00000013529	-	100	79.048	ENSSTOG00000013114	RPF2	100	73.152	Ictidomys_tridecemlineatus
ENSODEG00000013529	-	100	96.498	ENSJJAG00000009092	Rpf2	100	96.498	Jaculus_jaculus
ENSODEG00000013529	-	100	77.043	ENSKMAG00000014609	rpf2	97	74.497	Kryptolebias_marmoratus
ENSODEG00000013529	-	100	77.432	ENSLBEG00000011907	rpf2	91	77.432	Labrus_bergylta
ENSODEG00000013529	-	96	77.258	ENSLACG00000003942	RPF2	97	77.258	Latimeria_chalumnae
ENSODEG00000013529	-	100	70.280	ENSLOCG00000016992	rpf2	92	78.014	Lepisosteus_oculatus
ENSODEG00000013529	-	97	94.649	ENSLAFG00000018219	RPF2	97	94.649	Loxodonta_africana
ENSODEG00000013529	-	94	69.485	ENSMFAG00000036119	-	97	77.652	Macaca_fascicularis
ENSODEG00000013529	-	97	95.973	ENSMFAG00000000417	RPF2	100	94.545	Macaca_fascicularis
ENSODEG00000013529	-	98	95.987	ENSMMUG00000021532	RPF2	100	97.664	Macaca_mulatta
ENSODEG00000013529	-	96	77.000	ENSMMUG00000042376	-	97	77.000	Macaca_mulatta
ENSODEG00000013529	-	97	79.530	ENSMNEG00000031683	RPF2	97	79.195	Macaca_nemestrina
ENSODEG00000013529	-	96	79.322	ENSMLEG00000042472	-	97	79.322	Mandrillus_leucophaeus
ENSODEG00000013529	-	96	72.203	ENSMAMG00000004267	rpf2	96	72.203	Mastacembelus_armatus
ENSODEG00000013529	-	96	74.915	ENSMZEG00005015632	rpf2	96	74.915	Maylandia_zebra
ENSODEG00000013529	-	97	83.838	ENSMGAG00000013429	RPF2	97	83.838	Meleagris_gallopavo
ENSODEG00000013529	-	96	87.817	ENSMAUG00000005049	Rpf2	100	96.429	Mesocricetus_auratus
ENSODEG00000013529	-	97	94.631	ENSMICG00000032086	-	100	92.727	Microcebus_murinus
ENSODEG00000013529	-	100	80.913	ENSMICG00000038169	-	96	85.135	Microcebus_murinus
ENSODEG00000013529	-	96	77.966	ENSMICG00000028979	-	96	77.966	Microcebus_murinus
ENSODEG00000013529	-	100	95.331	ENSMOCG00000005634	Rpf2	100	95.331	Microtus_ochrogaster
ENSODEG00000013529	-	97	67.450	ENSMMOG00000014844	rpf2	98	67.450	Mola_mola
ENSODEG00000013529	-	98	90.301	ENSMODG00000017919	RPF2	98	90.301	Monodelphis_domestica
ENSODEG00000013529	-	94	75.087	ENSMALG00000019046	rpf2	94	75.087	Monopterus_albus
ENSODEG00000013529	-	100	94.553	MGP_CAROLIEiJ_G0015254	Rpf2	100	94.553	Mus_caroli
ENSODEG00000013529	-	100	93.774	ENSMUSG00000038510	Rpf2	100	93.774	Mus_musculus
ENSODEG00000013529	-	100	94.553	MGP_PahariEiJ_G0030671	Rpf2	100	94.553	Mus_pahari
ENSODEG00000013529	-	100	93.774	MGP_SPRETEiJ_G0016063	Rpf2	100	93.774	Mus_spretus
ENSODEG00000013529	-	97	97.315	ENSMPUG00000010183	RPF2	85	97.315	Mustela_putorius_furo
ENSODEG00000013529	-	83	95.669	ENSMLUG00000005676	RPF2	99	95.669	Myotis_lucifugus
ENSODEG00000013529	-	100	95.331	ENSNGAG00000009701	Rpf2	100	95.331	Nannospalax_galili
ENSODEG00000013529	-	96	74.576	ENSNBRG00000011087	rpf2	96	74.576	Neolamprologus_brichardi
ENSODEG00000013529	-	97	95.638	ENSNLEG00000027819	RPF2	97	95.638	Nomascus_leucogenys
ENSODEG00000013529	-	77	94.068	ENSNLEG00000011848	-	95	93.886	Nomascus_leucogenys
ENSODEG00000013529	-	96	82.886	ENSNLEG00000033597	-	95	82.886	Nomascus_leucogenys
ENSODEG00000013529	-	80	90.323	ENSMEUG00000006421	RPF2	100	70.470	Notamacropus_eugenii
ENSODEG00000013529	-	96	73.898	ENSONIG00000011383	rpf2	96	73.898	Oreochromis_niloticus
ENSODEG00000013529	-	97	94.631	ENSOCUG00000016028	RPF2	97	94.631	Oryctolagus_cuniculus
ENSODEG00000013529	-	96	72.881	ENSORLG00000015183	rpf2	96	72.881	Oryzias_latipes
ENSODEG00000013529	-	96	72.542	ENSORLG00020008756	rpf2	95	69.492	Oryzias_latipes_hni
ENSODEG00000013529	-	96	72.881	ENSORLG00015003841	RPF2	96	72.881	Oryzias_latipes_hsok
ENSODEG00000013529	-	96	74.576	ENSOMEG00000011508	rpf2	96	74.576	Oryzias_melastigma
ENSODEG00000013529	-	97	94.295	ENSOGAG00000007438	RPF2	97	94.295	Otolemur_garnettii
ENSODEG00000013529	-	97	95.302	ENSOARG00000015548	-	97	95.302	Ovis_aries
ENSODEG00000013529	-	97	95.302	ENSOARG00000009886	-	97	95.302	Ovis_aries
ENSODEG00000013529	-	97	95.973	ENSPPAG00000035622	RPF2	97	95.973	Pan_paniscus
ENSODEG00000013529	-	96	83.729	ENSPPAG00000032089	-	97	83.729	Pan_paniscus
ENSODEG00000013529	-	96	80.952	ENSPPRG00000008363	-	97	80.952	Panthera_pardus
ENSODEG00000013529	-	97	95.302	ENSPPRG00000000320	-	97	95.302	Panthera_pardus
ENSODEG00000013529	-	97	95.302	ENSPTIG00000002060	RPF2	97	95.302	Panthera_tigris_altaica
ENSODEG00000013529	-	97	95.973	ENSPTRG00000018503	RPF2	97	95.973	Pan_troglodytes
ENSODEG00000013529	-	97	95.973	ENSPANG00000018834	RPF2	97	95.973	Papio_anubis
ENSODEG00000013529	-	100	77.132	ENSPKIG00000019506	rpf2	92	77.132	Paramormyrops_kingsleyae
ENSODEG00000013529	-	96	84.281	ENSPSIG00000014887	RPF2	97	84.281	Pelodiscus_sinensis
ENSODEG00000013529	-	100	94.553	ENSPEMG00000011413	Rpf2	100	94.553	Peromyscus_maniculatus_bairdii
ENSODEG00000013529	-	94	91.349	ENSPCIG00000028172	RPF2	95	90.541	Phascolarctos_cinereus
ENSODEG00000013529	-	97	74.747	ENSPFOG00000003396	rpf2	97	74.747	Poecilia_formosa
ENSODEG00000013529	-	97	74.074	ENSPLAG00000001226	rpf2	97	74.074	Poecilia_latipinna
ENSODEG00000013529	-	97	74.747	ENSPMEG00000007781	rpf2	97	74.747	Poecilia_mexicana
ENSODEG00000013529	-	97	73.737	ENSPREG00000020525	rpf2	97	73.737	Poecilia_reticulata
ENSODEG00000013529	-	97	95.973	ENSPPYG00000016925	RPF2	97	95.973	Pongo_abelii
ENSODEG00000013529	-	66	92.353	ENSPCAG00000002562	RPF2	76	94.149	Procavia_capensis
ENSODEG00000013529	-	100	80.065	ENSPCOG00000012785	RPF2	100	80.065	Propithecus_coquereli
ENSODEG00000013529	-	80	96.327	ENSPVAG00000003446	RPF2	82	96.429	Pteropus_vampyrus
ENSODEG00000013529	-	94	73.356	ENSPNAG00000000082	rpf2	94	73.356	Pygocentrus_nattereri
ENSODEG00000013529	-	97	94.257	ENSRNOG00000000587	Rpf2	97	93.624	Rattus_norvegicus
ENSODEG00000013529	-	100	87.814	ENSRBIG00000038389	RPF2	100	93.333	Rhinopithecus_bieti
ENSODEG00000013529	-	79	91.701	ENSRROG00000036685	-	89	92.241	Rhinopithecus_roxellana
ENSODEG00000013529	-	97	94.631	ENSRROG00000036457	RPF2	97	94.631	Rhinopithecus_roxellana
ENSODEG00000013529	-	85	85.878	ENSRROG00000039510	-	97	85.878	Rhinopithecus_roxellana
ENSODEG00000013529	-	82	83.730	ENSRROG00000028992	-	84	83.730	Rhinopithecus_roxellana
ENSODEG00000013529	-	98	42.268	YKR081C	-	85	46.233	Saccharomyces_cerevisiae
ENSODEG00000013529	-	96	72.441	ENSSBOG00000034420	-	97	66.443	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	100	74.708	ENSSBOG00000022486	-	93	83.026	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	80	72.951	ENSSBOG00000030264	-	84	72.845	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	96	74.915	ENSSBOG00000025434	-	99	74.237	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	51	87.786	ENSSBOG00000003975	-	98	87.013	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	93	60.000	ENSSBOG00000029182	-	88	73.276	Saimiri_boliviensis_boliviensis
ENSODEG00000013529	-	97	89.527	ENSSHAG00000002212	RPF2	96	89.527	Sarcophilus_harrisii
ENSODEG00000013529	-	100	70.397	ENSSFOG00015020916	rpf2	97	71.622	Scleropages_formosus
ENSODEG00000013529	-	96	73.220	ENSSMAG00000017499	rpf2	96	73.220	Scophthalmus_maximus
ENSODEG00000013529	-	99	70.144	ENSSDUG00000010383	rpf2	96	68.771	Seriola_dumerili
ENSODEG00000013529	-	100	74.046	ENSSLDG00000022111	rpf2	96	73.559	Seriola_lalandi_dorsalis
ENSODEG00000013529	-	77	92.188	ENSSARG00000012063	RPF2	97	67.785	Sorex_araneus
ENSODEG00000013529	-	99	78.986	ENSSPUG00000005108	RPF2	95	79.932	Sphenodon_punctatus
ENSODEG00000013529	-	96	74.576	ENSSPAG00000008035	rpf2	96	74.576	Stegastes_partitus
ENSODEG00000013529	-	100	96.109	ENSSSCG00000004394	RPF2	97	95.302	Sus_scrofa
ENSODEG00000013529	-	97	84.512	ENSTGUG00000012034	RPF2	97	84.512	Taeniopygia_guttata
ENSODEG00000013529	-	94	73.958	ENSTRUG00000018264	rpf2	94	73.958	Takifugu_rubripes
ENSODEG00000013529	-	95	70.205	ENSTNIG00000002749	rpf2	95	70.205	Tetraodon_nigroviridis
ENSODEG00000013529	-	80	94.634	ENSTBEG00000017151	RPF2	83	87.402	Tupaia_belangeri
ENSODEG00000013529	-	97	94.966	ENSTTRG00000012357	RPF2	97	94.966	Tursiops_truncatus
ENSODEG00000013529	-	97	96.644	ENSUAMG00000013497	RPF2	97	96.644	Ursus_americanus
ENSODEG00000013529	-	97	96.309	ENSUMAG00000025488	RPF2	97	96.309	Ursus_maritimus
ENSODEG00000013529	-	97	94.631	ENSVPAG00000009562	RPF2	97	94.631	Vicugna_pacos
ENSODEG00000013529	-	100	91.985	ENSVVUG00000006593	-	92	91.985	Vulpes_vulpes
ENSODEG00000013529	-	91	90.598	ENSVVUG00000021231	-	100	83.039	Vulpes_vulpes
ENSODEG00000013529	-	97	79.000	ENSXETG00000021335	rpf2	97	79.000	Xenopus_tropicalis
ENSODEG00000013529	-	100	69.784	ENSXCOG00000001590	rpf2	97	70.707	Xiphophorus_couchianus
ENSODEG00000013529	-	100	75.097	ENSXMAG00000021706	rpf2	92	75.097	Xiphophorus_maculatus