EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000013739 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: TAR DNA binding protein
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 14955 bases
Position: chrJH651628.1:7400665-7415619
Accession: 101577483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018642	RRM_1	PF00076.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000018876	-	1158	XM_004639733	ENSODEP00000018642	149 (aa)	XP_004639790	-

Gene Model

Click here to download ENSODEG00000013739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013739	-	100	100.000	ENSG00000120948	TARDBP	99	100.000	Homo_sapiens
ENSODEG00000013739	-	100	85.333	ENSAPOG00000012879	tardbpl	50	85.333	Acanthochromis_polyacanthus
ENSODEG00000013739	-	100	71.141	ENSAMEG00000008772	-	53	71.141	Ailuropoda_melanoleuca
ENSODEG00000013739	-	100	85.333	ENSAOCG00000020211	tardbpl	50	85.333	Amphiprion_ocellaris
ENSODEG00000013739	-	100	85.333	ENSAPEG00000018093	tardbpl	50	85.333	Amphiprion_percula
ENSODEG00000013739	-	100	85.333	ENSATEG00000017658	tardbpl	50	85.333	Anabas_testudineus
ENSODEG00000013739	-	77	92.105	ENSANAG00000027281	-	56	92.105	Aotus_nancymaae
ENSODEG00000013739	-	100	99.329	ENSANAG00000035249	-	54	99.329	Aotus_nancymaae
ENSODEG00000013739	-	100	81.333	ENSACLG00000025494	tardbpl	50	81.333	Astatotilapia_calliptera
ENSODEG00000013739	-	100	98.658	ENSBTAG00000003697	TARDBP	50	98.658	Bos_taurus
ENSODEG00000013739	-	100	99.329	ENSCJAG00000002381	TARDBP	54	99.329	Callithrix_jacchus
ENSODEG00000013739	-	100	75.168	ENSCAFG00020013548	-	56	75.168	Canis_lupus_dingo
ENSODEG00000013739	-	100	98.658	ENSCHIG00000026090	TARDBP	50	98.658	Capra_hircus
ENSODEG00000013739	-	100	100.000	ENSCPOG00000011619	TARDBP	50	100.000	Cavia_porcellus
ENSODEG00000013739	-	99	86.486	ENSCCAG00000010279	-	52	86.486	Cebus_capucinus
ENSODEG00000013739	-	100	86.577	ENSCATG00000029126	-	56	86.577	Cercocebus_atys
ENSODEG00000013739	-	100	100.000	ENSCATG00000031367	TARDBP	51	100.000	Cercocebus_atys
ENSODEG00000013739	-	97	95.172	ENSCHOG00000013276	-	68	95.172	Choloepus_hoffmanni
ENSODEG00000013739	-	100	100.000	ENSCANG00000030022	TARDBP	52	100.000	Colobus_angolensis_palliatus
ENSODEG00000013739	-	100	99.329	ENSCGRG00001010684	-	75	99.329	Cricetulus_griseus_chok1gshd
ENSODEG00000013739	-	100	99.329	ENSCGRG00000007923	-	50	99.329	Cricetulus_griseus_crigri
ENSODEG00000013739	-	100	81.333	ENSCSEG00000005274	tardbpl	50	81.333	Cynoglossus_semilaevis
ENSODEG00000013739	-	100	86.000	ENSCVAG00000016647	tardbpl	51	86.000	Cyprinodon_variegatus
ENSODEG00000013739	-	100	98.658	ENSDNOG00000008531	TARDBP	50	98.658	Dasypus_novemcinctus
ENSODEG00000013739	-	100	52.532	ENSEBUG00000007562	-	57	52.532	Eptatretus_burgeri
ENSODEG00000013739	-	100	99.329	ENSEASG00005019017	TARDBP	59	99.329	Equus_asinus_asinus
ENSODEG00000013739	-	100	99.329	ENSECAG00000008338	TARDBP	50	99.329	Equus_caballus
ENSODEG00000013739	-	100	99.329	ENSFCAG00000000050	TARDBP	50	99.329	Felis_catus
ENSODEG00000013739	-	100	99.329	ENSFDAG00000004675	TARDBP	50	99.329	Fukomys_damarensis
ENSODEG00000013739	-	100	86.000	ENSFHEG00000010145	tardbpl	50	86.000	Fundulus_heteroclitus
ENSODEG00000013739	-	100	84.000	ENSGMOG00000000526	tardbpl	50	84.000	Gadus_morhua
ENSODEG00000013739	-	100	84.000	ENSGACG00000007124	tardbpl	50	84.000	Gasterosteus_aculeatus
ENSODEG00000013739	-	100	62.416	ENSGGOG00000042352	-	50	62.416	Gorilla_gorilla
ENSODEG00000013739	-	100	81.333	ENSHBUG00000020551	tardbpl	50	81.333	Haplochromis_burtoni
ENSODEG00000013739	-	89	87.970	ENSHGLG00000008540	-	100	87.970	Heterocephalus_glaber_female
ENSODEG00000013739	-	100	84.667	ENSHCOG00000015858	tardbpl	51	84.667	Hippocampus_comes
ENSODEG00000013739	-	100	98.658	ENSSTOG00000008406	-	50	98.658	Ictidomys_tridecemlineatus
ENSODEG00000013739	-	100	98.658	ENSJJAG00000014196	-	51	98.658	Jaculus_jaculus
ENSODEG00000013739	-	100	85.333	ENSKMAG00000015796	tardbpl	50	85.333	Kryptolebias_marmoratus
ENSODEG00000013739	-	100	82.667	ENSLBEG00000021801	tardbpl	50	82.667	Labrus_bergylta
ENSODEG00000013739	-	100	100.000	ENSMFAG00000002750	TARDBP	52	100.000	Macaca_fascicularis
ENSODEG00000013739	-	100	86.577	ENSMFAG00000000832	-	75	86.577	Macaca_fascicularis
ENSODEG00000013739	-	100	85.906	ENSMMUG00000003940	-	61	85.906	Macaca_mulatta
ENSODEG00000013739	-	100	100.000	ENSMMUG00000007456	TARDBP	56	100.000	Macaca_mulatta
ENSODEG00000013739	-	100	100.000	ENSMNEG00000030163	TARDBP	52	100.000	Macaca_nemestrina
ENSODEG00000013739	-	100	84.564	ENSMNEG00000025649	-	52	84.564	Macaca_nemestrina
ENSODEG00000013739	-	100	100.000	ENSMLEG00000041791	TARDBP	52	100.000	Mandrillus_leucophaeus
ENSODEG00000013739	-	100	85.333	ENSMAMG00000009233	tardbpl	50	85.333	Mastacembelus_armatus
ENSODEG00000013739	-	100	81.333	ENSMZEG00005013608	tardbpl	50	81.333	Maylandia_zebra
ENSODEG00000013739	-	100	99.329	ENSMAUG00000018057	Tardbp	50	99.329	Mesocricetus_auratus
ENSODEG00000013739	-	100	99.329	ENSMICG00000003838	TARDBP	51	99.329	Microcebus_murinus
ENSODEG00000013739	-	100	99.329	ENSMOCG00000003562	Tardbp	50	99.329	Microtus_ochrogaster
ENSODEG00000013739	-	100	99.329	ENSMODG00000011233	-	50	99.329	Monodelphis_domestica
ENSODEG00000013739	-	100	84.667	ENSMALG00000021161	tardbpl	50	84.667	Monopterus_albus
ENSODEG00000013739	-	100	99.329	MGP_CAROLIEiJ_G0026805	Tardbp	100	99.329	Mus_caroli
ENSODEG00000013739	-	100	99.329	ENSMUSG00000041459	Tardbp	100	99.329	Mus_musculus
ENSODEG00000013739	-	100	98.658	MGP_PahariEiJ_G0029153	Tardbp	100	98.658	Mus_pahari
ENSODEG00000013739	-	100	99.329	MGP_SPRETEiJ_G0027798	Tardbp	100	99.329	Mus_spretus
ENSODEG00000013739	-	100	99.329	ENSMPUG00000016443	TARDBP	50	99.329	Mustela_putorius_furo
ENSODEG00000013739	-	100	99.329	ENSNGAG00000023416	-	51	99.329	Nannospalax_galili
ENSODEG00000013739	-	100	81.333	ENSNBRG00000006706	tardbpl	50	81.333	Neolamprologus_brichardi
ENSODEG00000013739	-	95	95.070	ENSNLEG00000026620	-	51	95.070	Nomascus_leucogenys
ENSODEG00000013739	-	100	82.000	ENSONIG00000002332	tardbpl	50	82.000	Oreochromis_niloticus
ENSODEG00000013739	-	100	86.000	ENSORLG00000005188	tardbpl	57	86.000	Oryzias_latipes
ENSODEG00000013739	-	100	86.000	ENSORLG00020013159	tardbpl	50	86.000	Oryzias_latipes_hni
ENSODEG00000013739	-	100	86.000	ENSORLG00015005048	tardbpl	57	86.000	Oryzias_latipes_hsok
ENSODEG00000013739	-	100	85.333	ENSOMEG00000003102	tardbpl	50	85.333	Oryzias_melastigma
ENSODEG00000013739	-	100	100.000	ENSPPAG00000039086	TARDBP	52	100.000	Pan_paniscus
ENSODEG00000013739	-	100	78.523	ENSPTIG00000014945	-	50	78.523	Panthera_tigris_altaica
ENSODEG00000013739	-	100	99.329	ENSPTIG00000011396	TARDBP	51	99.329	Panthera_tigris_altaica
ENSODEG00000013739	-	100	100.000	ENSPTRG00000048576	-	52	100.000	Pan_troglodytes
ENSODEG00000013739	-	100	100.000	ENSPTRG00000000136	TARDBP	52	100.000	Pan_troglodytes
ENSODEG00000013739	-	100	100.000	ENSPANG00000017459	TARDBP	52	100.000	Papio_anubis
ENSODEG00000013739	-	100	86.667	ENSPKIG00000013415	tardbpl	50	86.667	Paramormyrops_kingsleyae
ENSODEG00000013739	-	100	99.329	ENSPEMG00000015154	Tardbp	51	99.329	Peromyscus_maniculatus_bairdii
ENSODEG00000013739	-	100	99.329	ENSPCIG00000007956	TARDBP	61	99.329	Phascolarctos_cinereus
ENSODEG00000013739	-	100	85.333	ENSPFOG00000004365	tardbpl	50	85.333	Poecilia_formosa
ENSODEG00000013739	-	100	85.333	ENSPLAG00000014550	-	50	85.333	Poecilia_latipinna
ENSODEG00000013739	-	100	85.333	ENSPLAG00000007292	tardbpl	50	85.333	Poecilia_latipinna
ENSODEG00000013739	-	100	85.333	ENSPMEG00000016541	tardbpl	50	85.333	Poecilia_mexicana
ENSODEG00000013739	-	100	85.333	ENSPREG00000016071	tardbpl	50	85.333	Poecilia_reticulata
ENSODEG00000013739	-	93	88.406	ENSPPYG00000013322	-	55	88.406	Pongo_abelii
ENSODEG00000013739	-	100	77.852	ENSPPYG00000016872	-	50	77.852	Pongo_abelii
ENSODEG00000013739	-	93	97.826	ENSPCOG00000016073	TARDBP	54	97.826	Propithecus_coquereli
ENSODEG00000013739	-	100	81.333	ENSPNYG00000007072	tardbpl	50	81.333	Pundamilia_nyererei
ENSODEG00000013739	-	100	86.000	ENSPNAG00000022439	tardbpl	50	86.000	Pygocentrus_nattereri
ENSODEG00000013739	-	100	98.658	ENSRNOG00000012455	Tardbp	52	98.658	Rattus_norvegicus
ENSODEG00000013739	-	100	100.000	ENSRBIG00000034783	TARDBP	54	100.000	Rhinopithecus_bieti
ENSODEG00000013739	-	100	100.000	ENSRROG00000039927	TARDBP	54	100.000	Rhinopithecus_roxellana
ENSODEG00000013739	-	100	99.329	ENSSBOG00000028814	-	54	99.329	Saimiri_boliviensis_boliviensis
ENSODEG00000013739	-	100	85.906	ENSSBOG00000022837	-	58	85.906	Saimiri_boliviensis_boliviensis
ENSODEG00000013739	-	100	84.000	ENSSMAG00000017715	tardbpl	50	84.000	Scophthalmus_maximus
ENSODEG00000013739	-	100	86.667	ENSSDUG00000006852	tardbpl	50	86.667	Seriola_dumerili
ENSODEG00000013739	-	100	86.667	ENSSLDG00000000280	tardbpl	50	86.667	Seriola_lalandi_dorsalis
ENSODEG00000013739	-	100	86.000	ENSSPAG00000009970	tardbpl	50	86.000	Stegastes_partitus
ENSODEG00000013739	-	98	84.932	ENSSPAG00000005946	tardbp	58	84.932	Stegastes_partitus
ENSODEG00000013739	-	100	99.329	ENSSSCG00000023126	-	50	99.329	Sus_scrofa
ENSODEG00000013739	-	98	75.309	ENSTRUG00000012070	tardbpl	52	75.309	Takifugu_rubripes
ENSODEG00000013739	-	100	99.329	ENSUMAG00000023737	-	51	99.329	Ursus_maritimus
ENSODEG00000013739	-	100	99.329	ENSVVUG00000027110	TARDBP	50	99.329	Vulpes_vulpes
ENSODEG00000013739	-	100	85.333	ENSXMAG00000011345	tardbpl	50	85.333	Xiphophorus_maculatus