EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000013862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 428 bases
Position: chrJH651552.1:4005441-4005868
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000018802	SRP19	PF01922.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019039	-	375	-	ENSODEP00000018802	124 (aa)	-	-

Gene Model

Click here to download ENSODEG00000013862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000013862	-	94	65.185	ENSODEG00000005033	-	89	64.122
ENSODEG00000013862	-	91	77.099	ENSODEG00000019119	-	91	77.099
ENSODEG00000013862	-	79	92.308	ENSODEG00000005538	-	91	92.308
ENSODEG00000013862	-	94	65.185	ENSODEG00000003165	-	89	64.122
ENSODEG00000013862	-	94	63.704	ENSODEG00000016828	-	89	62.595
ENSODEG00000013862	-	82	64.815	ENSODEG00000000221	-	73	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000013862	-	94	77.037	ENSG00000153037	SRP19	100	73.267	Homo_sapiens
ENSODEG00000013862	-	87	57.937	ENSAPOG00000002199	srp19	86	56.911	Acanthochromis_polyacanthus
ENSODEG00000013862	-	94	77.778	ENSAMEG00000012623	SRP19	90	77.099	Ailuropoda_melanoleuca
ENSODEG00000013862	-	87	57.937	ENSACIG00000005082	srp19	86	56.911	Amphilophus_citrinellus
ENSODEG00000013862	-	87	57.143	ENSAOCG00000002718	srp19	87	56.098	Amphiprion_ocellaris
ENSODEG00000013862	-	87	57.937	ENSAPEG00000022170	srp19	87	56.911	Amphiprion_percula
ENSODEG00000013862	-	87	59.524	ENSATEG00000012472	srp19	87	58.537	Anabas_testudineus
ENSODEG00000013862	-	82	71.296	ENSAPLG00000002624	SRP19	87	71.296	Anas_platyrhynchos
ENSODEG00000013862	-	94	62.222	ENSACAG00000007550	SRP19	92	62.222	Anolis_carolinensis
ENSODEG00000013862	-	74	77.551	ENSANAG00000029862	-	85	76.344	Aotus_nancymaae
ENSODEG00000013862	-	94	78.519	ENSANAG00000032576	-	91	77.863	Aotus_nancymaae
ENSODEG00000013862	-	96	61.832	ENSANAG00000030287	-	96	61.600	Aotus_nancymaae
ENSODEG00000013862	-	87	57.143	ENSACLG00000006259	srp19	82	64.130	Astatotilapia_calliptera
ENSODEG00000013862	-	86	60.163	ENSAMXG00000043011	srp19	86	59.504	Astyanax_mexicanus
ENSODEG00000013862	-	94	77.037	ENSBTAG00000012803	SRP19	91	76.336	Bos_taurus
ENSODEG00000013862	-	80	41.379	WBGene00018159	F37F2.2	72	45.631	Caenorhabditis_elegans
ENSODEG00000013862	-	94	77.037	ENSCJAG00000038676	-	96	67.925	Callithrix_jacchus
ENSODEG00000013862	-	91	60.800	ENSCJAG00000045531	-	83	60.800	Callithrix_jacchus
ENSODEG00000013862	-	94	77.037	ENSCAFG00000031549	SRP19	91	76.336	Canis_familiaris
ENSODEG00000013862	-	79	83.654	ENSCAFG00020022437	-	78	83.654	Canis_lupus_dingo
ENSODEG00000013862	-	69	80.435	ENSCAFG00020004285	-	82	80.435	Canis_lupus_dingo
ENSODEG00000013862	-	94	77.037	ENSCAFG00020014267	-	91	76.336	Canis_lupus_dingo
ENSODEG00000013862	-	94	77.037	ENSCHIG00000017551	SRP19	91	76.336	Capra_hircus
ENSODEG00000013862	-	94	77.778	ENSTSYG00000007875	SRP19	91	77.099	Carlito_syrichta
ENSODEG00000013862	-	75	70.270	ENSCPOG00000036806	SRP19	83	70.270	Cavia_porcellus
ENSODEG00000013862	-	92	64.567	ENSCCAG00000023426	-	86	64.286	Cebus_capucinus
ENSODEG00000013862	-	94	78.519	ENSCCAG00000035651	-	91	77.863	Cebus_capucinus
ENSODEG00000013862	-	92	61.905	ENSCCAG00000029821	-	66	61.600	Cebus_capucinus
ENSODEG00000013862	-	79	73.077	ENSCATG00000040513	-	71	66.667	Cercocebus_atys
ENSODEG00000013862	-	94	76.744	ENSCATG00000039250	-	91	76.000	Cercocebus_atys
ENSODEG00000013862	-	94	79.070	ENSCLAG00000016055	-	91	78.400	Chinchilla_lanigera
ENSODEG00000013862	-	94	80.741	ENSCLAG00000004791	-	91	80.153	Chinchilla_lanigera
ENSODEG00000013862	-	94	77.037	ENSCHOG00000013452	SRP19	91	76.336	Choloepus_hoffmanni
ENSODEG00000013862	-	93	63.910	ENSCPBG00000013903	SRP19	93	63.910	Chrysemys_picta_bellii
ENSODEG00000013862	-	94	78.519	ENSCGRG00001020510	Srp19	94	78.519	Cricetulus_griseus_chok1gshd
ENSODEG00000013862	-	79	87.500	ENSCGRG00000008542	-	81	87.500	Cricetulus_griseus_crigri
ENSODEG00000013862	-	73	81.188	ENSCGRG00000010716	-	85	80.412	Cricetulus_griseus_crigri
ENSODEG00000013862	-	87	58.730	ENSCSEG00000010039	srp19	86	57.724	Cynoglossus_semilaevis
ENSODEG00000013862	-	87	59.524	ENSCVAG00000017621	srp19	87	59.350	Cyprinodon_variegatus
ENSODEG00000013862	-	86	58.400	ENSDARG00000035699	srp19	87	57.724	Danio_rerio
ENSODEG00000013862	-	94	76.296	ENSDNOG00000013856	SRP19	91	75.573	Dasypus_novemcinctus
ENSODEG00000013862	-	94	72.951	ENSDORG00000004746	Srp19	89	72.034	Dipodomys_ordii
ENSODEG00000013862	-	75	41.818	FBgn0015298	Srp19	57	45.652	Drosophila_melanogaster
ENSODEG00000013862	-	94	73.333	ENSETEG00000017132	SRP19	94	73.333	Echinops_telfairi
ENSODEG00000013862	-	87	48.800	ENSEBUG00000006613	srp19	88	48.800	Eptatretus_burgeri
ENSODEG00000013862	-	94	77.778	ENSEASG00005015182	SRP19	91	77.099	Equus_asinus_asinus
ENSODEG00000013862	-	94	77.778	ENSEEUG00000007298	SRP19	91	77.099	Erinaceus_europaeus
ENSODEG00000013862	-	87	56.349	ENSELUG00000004594	srp19	87	56.098	Esox_lucius
ENSODEG00000013862	-	86	59.200	ENSELUG00000007958	srp19	87	58.537	Esox_lucius
ENSODEG00000013862	-	94	77.778	ENSFCAG00000025895	SRP19	91	77.099	Felis_catus
ENSODEG00000013862	-	94	79.259	ENSFDAG00000013543	SRP19	91	78.626	Fukomys_damarensis
ENSODEG00000013862	-	75	56.757	ENSFHEG00000000493	srp19	87	56.911	Fundulus_heteroclitus
ENSODEG00000013862	-	81	65.421	ENSGMOG00000003264	srp19	80	65.385	Gadus_morhua
ENSODEG00000013862	-	88	65.354	ENSGALG00000000218	SRP19	94	65.185	Gallus_gallus
ENSODEG00000013862	-	81	63.551	ENSGAFG00000015815	srp19	50	62.500	Gambusia_affinis
ENSODEG00000013862	-	87	58.730	ENSGACG00000001093	srp19	82	57.724	Gasterosteus_aculeatus
ENSODEG00000013862	-	96	64.234	ENSGAGG00000025305	SRP19	95	64.234	Gopherus_agassizii
ENSODEG00000013862	-	87	56.693	ENSHBUG00000006131	srp19	89	45.695	Haplochromis_burtoni
ENSODEG00000013862	-	94	80.741	ENSHGLG00000006075	SRP19	91	80.153	Heterocephalus_glaber_female
ENSODEG00000013862	-	94	80.741	ENSHGLG00100015859	SRP19	91	80.153	Heterocephalus_glaber_male
ENSODEG00000013862	-	87	55.556	ENSHCOG00000013231	srp19	87	56.098	Hippocampus_comes
ENSODEG00000013862	-	86	58.400	ENSIPUG00000025084	srp19	87	56.911	Ictalurus_punctatus
ENSODEG00000013862	-	94	77.037	ENSSTOG00000000348	SRP19	91	76.336	Ictidomys_tridecemlineatus
ENSODEG00000013862	-	94	76.296	ENSJJAG00000017185	Srp19	91	75.573	Jaculus_jaculus
ENSODEG00000013862	-	87	59.524	ENSKMAG00000011155	srp19	87	58.537	Kryptolebias_marmoratus
ENSODEG00000013862	-	87	58.730	ENSLBEG00000026727	srp19	87	57.724	Labrus_bergylta
ENSODEG00000013862	-	81	72.642	ENSLACG00000004459	SRP19	68	72.115	Latimeria_chalumnae
ENSODEG00000013862	-	86	61.600	ENSLOCG00000010302	srp19	87	60.976	Lepisosteus_oculatus
ENSODEG00000013862	-	94	76.296	ENSLAFG00000002564	SRP19	91	75.573	Loxodonta_africana
ENSODEG00000013862	-	94	75.194	ENSMFAG00000000554	-	84	87.356	Macaca_fascicularis
ENSODEG00000013862	-	90	57.658	ENSMFAG00000040055	-	85	57.658	Macaca_fascicularis
ENSODEG00000013862	-	94	75.194	ENSMMUG00000049186	-	90	77.500	Macaca_mulatta
ENSODEG00000013862	-	85	66.393	ENSMMUG00000032515	-	90	66.393	Macaca_mulatta
ENSODEG00000013862	-	94	76.296	ENSMNEG00000038714	SRP19	94	76.296	Macaca_nemestrina
ENSODEG00000013862	-	90	56.757	ENSMNEG00000040117	-	85	56.757	Macaca_nemestrina
ENSODEG00000013862	-	87	58.730	ENSMAMG00000018346	srp19	86	57.724	Mastacembelus_armatus
ENSODEG00000013862	-	87	57.143	ENSMZEG00005001765	srp19	87	56.098	Maylandia_zebra
ENSODEG00000013862	-	82	70.370	ENSMGAG00000006762	SRP19	82	70.370	Meleagris_gallopavo
ENSODEG00000013862	-	94	76.296	ENSMICG00000000399	SRP19	94	76.296	Microcebus_murinus
ENSODEG00000013862	-	77	77.228	ENSMICG00000049202	-	91	77.228	Microcebus_murinus
ENSODEG00000013862	-	73	86.598	ENSMOCG00000010532	-	89	86.598	Microtus_ochrogaster
ENSODEG00000013862	-	94	78.519	ENSMOCG00000006534	Srp19	94	78.519	Microtus_ochrogaster
ENSODEG00000013862	-	92	58.333	ENSMMOG00000010417	srp19	84	56.923	Mola_mola
ENSODEG00000013862	-	86	74.400	ENSMODG00000013278	SRP19	86	73.984	Monodelphis_domestica
ENSODEG00000013862	-	87	60.317	ENSMALG00000003858	srp19	87	59.350	Monopterus_albus
ENSODEG00000013862	-	94	78.519	MGP_CAROLIEiJ_G0022086	Srp19	94	78.519	Mus_caroli
ENSODEG00000013862	-	94	78.519	ENSMUSG00000014504	Srp19	94	78.519	Mus_musculus
ENSODEG00000013862	-	94	77.778	MGP_PahariEiJ_G0018820	Srp19	94	77.778	Mus_pahari
ENSODEG00000013862	-	94	78.519	MGP_SPRETEiJ_G0022998	Srp19	94	78.519	Mus_spretus
ENSODEG00000013862	-	94	78.519	ENSMPUG00000012695	SRP19	90	77.863	Mustela_putorius_furo
ENSODEG00000013862	-	94	77.778	ENSMLUG00000014793	-	94	77.778	Myotis_lucifugus
ENSODEG00000013862	-	81	80.189	ENSMLUG00000024549	-	88	73.770	Myotis_lucifugus
ENSODEG00000013862	-	94	76.296	ENSNGAG00000003440	-	94	76.296	Nannospalax_galili
ENSODEG00000013862	-	90	69.767	ENSNGAG00000014524	-	100	69.767	Nannospalax_galili
ENSODEG00000013862	-	94	67.692	ENSNLEG00000035364	-	88	76.042	Nomascus_leucogenys
ENSODEG00000013862	-	81	83.019	ENSMEUG00000012529	SRP19	80	82.692	Notamacropus_eugenii
ENSODEG00000013862	-	79	82.692	ENSOPRG00000010549	SRP19	80	82.692	Ochotona_princeps
ENSODEG00000013862	-	87	57.143	ENSONIG00000000542	srp19	87	56.098	Oreochromis_niloticus
ENSODEG00000013862	-	86	67.200	ENSOANG00000011139	SRP19	70	68.033	Ornithorhynchus_anatinus
ENSODEG00000013862	-	94	76.471	ENSOCUG00000015639	SRP19	94	76.471	Oryctolagus_cuniculus
ENSODEG00000013862	-	87	59.524	ENSORLG00000028267	srp19	83	66.304	Oryzias_latipes
ENSODEG00000013862	-	87	59.524	ENSORLG00020015201	srp19	83	66.304	Oryzias_latipes_hni
ENSODEG00000013862	-	87	59.524	ENSORLG00015007525	srp19	83	66.304	Oryzias_latipes_hsok
ENSODEG00000013862	-	81	66.355	ENSOMEG00000009178	srp19	87	59.350	Oryzias_melastigma
ENSODEG00000013862	-	94	77.037	ENSOGAG00000008579	SRP19	91	76.336	Otolemur_garnettii
ENSODEG00000013862	-	94	76.296	ENSOARG00000016066	SRP19	94	76.296	Ovis_aries
ENSODEG00000013862	-	94	77.037	ENSPPAG00000037062	SRP19	94	77.037	Pan_paniscus
ENSODEG00000013862	-	94	77.778	ENSPPRG00000015591	SRP19	91	77.099	Panthera_pardus
ENSODEG00000013862	-	94	77.778	ENSPTIG00000021474	SRP19	91	77.099	Panthera_tigris_altaica
ENSODEG00000013862	-	94	77.037	ENSPTRG00000017136	SRP19	94	77.037	Pan_troglodytes
ENSODEG00000013862	-	94	75.969	ENSPANG00000034740	-	91	75.200	Papio_anubis
ENSODEG00000013862	-	94	76.296	ENSPANG00000004370	-	94	76.296	Papio_anubis
ENSODEG00000013862	-	87	59.524	ENSPKIG00000018671	srp19	87	58.537	Paramormyrops_kingsleyae
ENSODEG00000013862	-	84	71.818	ENSPSIG00000013811	SRP19	84	71.818	Pelodiscus_sinensis
ENSODEG00000013862	-	87	57.937	ENSPMGG00000015313	srp19	86	58.197	Periophthalmus_magnuspinnatus
ENSODEG00000013862	-	94	76.866	ENSPEMG00000004412	-	93	76.866	Peromyscus_maniculatus_bairdii
ENSODEG00000013862	-	89	50.781	ENSPMAG00000002685	srp19	86	51.639	Petromyzon_marinus
ENSODEG00000013862	-	86	76.000	ENSPCIG00000010250	SRP19	85	75.610	Phascolarctos_cinereus
ENSODEG00000013862	-	87	57.937	ENSPFOG00000015887	srp19	87	57.724	Poecilia_formosa
ENSODEG00000013862	-	87	57.937	ENSPLAG00000007784	srp19	84	64.130	Poecilia_latipinna
ENSODEG00000013862	-	87	57.143	ENSPMEG00000003056	srp19	84	64.130	Poecilia_mexicana
ENSODEG00000013862	-	87	57.937	ENSPREG00000017307	srp19	86	57.724	Poecilia_reticulata
ENSODEG00000013862	-	94	77.037	ENSPPYG00000029584	SRP19	92	77.037	Pongo_abelii
ENSODEG00000013862	-	94	67.407	ENSPCAG00000000228	SRP19	91	66.412	Procavia_capensis
ENSODEG00000013862	-	94	77.037	ENSPCOG00000023239	SRP19	94	77.037	Propithecus_coquereli
ENSODEG00000013862	-	94	77.037	ENSPVAG00000004895	SRP19	91	76.336	Pteropus_vampyrus
ENSODEG00000013862	-	89	55.118	ENSPNAG00000009392	srp19	91	54.400	Pygocentrus_nattereri
ENSODEG00000013862	-	94	77.778	ENSRNOG00000020204	Srp19	94	77.778	Rattus_norvegicus
ENSODEG00000013862	-	94	76.296	ENSRBIG00000015627	-	94	76.296	Rhinopithecus_bieti
ENSODEG00000013862	-	93	77.953	ENSRBIG00000040440	-	90	77.600	Rhinopithecus_bieti
ENSODEG00000013862	-	50	67.647	ENSRBIG00000031651	-	76	67.647	Rhinopithecus_bieti
ENSODEG00000013862	-	93	77.953	ENSRROG00000037054	-	91	77.600	Rhinopithecus_roxellana
ENSODEG00000013862	-	90	61.261	ENSRROG00000037316	-	84	60.377	Rhinopithecus_roxellana
ENSODEG00000013862	-	94	78.519	ENSSBOG00000028071	-	91	77.863	Saimiri_boliviensis_boliviensis
ENSODEG00000013862	-	94	65.833	ENSSBOG00000032685	-	89	65.517	Saimiri_boliviensis_boliviensis
ENSODEG00000013862	-	87	58.730	ENSSFOG00015022139	srp19	87	57.724	Scleropages_formosus
ENSODEG00000013862	-	87	54.762	ENSSMAG00000016803	srp19	86	53.659	Scophthalmus_maximus
ENSODEG00000013862	-	72	67.368	ENSSDUG00000012930	srp19	59	66.304	Seriola_dumerili
ENSODEG00000013862	-	94	74.815	ENSSARG00000000615	SRP19	91	74.046	Sorex_araneus
ENSODEG00000013862	-	81	76.415	ENSSPUG00000015769	SRP19	89	68.217	Sphenodon_punctatus
ENSODEG00000013862	-	94	77.778	ENSSSCG00000026230	SRP19	91	77.099	Sus_scrofa
ENSODEG00000013862	-	82	71.296	ENSTGUG00000001019	SRP19	92	64.179	Taeniopygia_guttata
ENSODEG00000013862	-	87	61.240	ENSTRUG00000023119	srp19	87	60.317	Takifugu_rubripes
ENSODEG00000013862	-	87	58.730	ENSTNIG00000018880	srp19	87	57.724	Tetraodon_nigroviridis
ENSODEG00000013862	-	94	76.296	ENSTTRG00000001690	SRP19	91	75.573	Tursiops_truncatus
ENSODEG00000013862	-	91	77.863	ENSUAMG00000000111	SRP19	91	77.863	Ursus_americanus
ENSODEG00000013862	-	94	78.519	ENSUMAG00000016997	SRP19	91	77.863	Ursus_maritimus
ENSODEG00000013862	-	94	78.519	ENSVPAG00000006001	SRP19	91	77.863	Vicugna_pacos
ENSODEG00000013862	-	73	84.536	ENSVVUG00000012423	SRP19	83	84.615	Vulpes_vulpes
ENSODEG00000013862	-	81	63.551	ENSXETG00000011993	srp19	73	62.500	Xenopus_tropicalis
ENSODEG00000013862	-	65	49.020	ENSXCOG00000012530	srp19	72	49.020	Xiphophorus_couchianus
ENSODEG00000013862	-	91	56.716	ENSXMAG00000029788	srp19	87	57.724	Xiphophorus_maculatus