EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000013934 (Gene tree)
Gene ID
101579532
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
215565 bases
Position
chrJH651547.1:12660521-12876085
Accession
101579532
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000018898RRM_1PF00076.226e-3312
ENSODEP00000018898RRM_1PF00076.226e-3322
ENSODEP00000018897RRM_1PF00076.227.2e-3312
ENSODEP00000018897RRM_1PF00076.227.2e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000019136RBMS1-2011212XM_004629886ENSODEP00000018897403 (aa)XP_004629943UPI000333BC12
ENSODET00000019137RBMS1-2021419-ENSODEP00000018898386 (aa)--
Gene Model
Click here to download ENSODEG00000013934's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000013934's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000013934RBMS17238.272ENSODEG00000014460CELF56538.272
ENSODEG00000013934RBMS15138.140ENSODEG00000002531ELAVL27537.129
ENSODEG00000013934RBMS15135.484ENSODEG00000015790ELAVL36337.356
ENSODEG00000013934RBMS15035.802ENSODEG00000015399-5535.802
ENSODEG00000013934RBMS19561.685ENSODEG00000006249RBMS28571.521
ENSODEG00000013934RBMS15039.474ENSODEG00000000887CELF25239.474
ENSODEG00000013934RBMS110071.631ENSODEG00000003651RBMS39973.585
ENSODEG00000013934RBMS15633.871ENSODEG00000006770ELAVL47535.749
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000013934RBMS110098.276ENSG00000153250RBMS110099.213Homo_sapiens
ENSODEG00000013934RBMS19573.984ENSAPOG00000024437-9471.901Acanthochromis_polyacanthus
ENSODEG00000013934RBMS19762.500ENSAPOG00000013761rbms1a8965.988Acanthochromis_polyacanthus
ENSODEG00000013934RBMS110093.846ENSAMEG00000012661RBMS110097.396Ailuropoda_melanoleuca
ENSODEG00000013934RBMS19456.787ENSACIG00000000113rbms1a8959.710Amphilophus_citrinellus
ENSODEG00000013934RBMS19675.578ENSACIG00000021498RBMS19775.578Amphilophus_citrinellus
ENSODEG00000013934RBMS19762.766ENSAOCG00000010066rbms1a8966.279Amphiprion_ocellaris
ENSODEG00000013934RBMS19377.895ENSAOCG00000014482-9577.895Amphiprion_ocellaris
ENSODEG00000013934RBMS19762.766ENSAPEG00000023563rbms1a8966.279Amphiprion_percula
ENSODEG00000013934RBMS19377.632ENSAPEG00000018371-9577.632Amphiprion_percula
ENSODEG00000013934RBMS19574.093ENSATEG00000018573RBMS18976.989Anabas_testudineus
ENSODEG00000013934RBMS19762.234ENSATEG00000015450rbms1a8965.698Anabas_testudineus
ENSODEG00000013934RBMS19592.670ENSAPLG00000007282RBMS110092.658Anas_platyrhynchos
ENSODEG00000013934RBMS110088.491ENSACAG00000011984RBMS18089.378Anolis_carolinensis
ENSODEG00000013934RBMS18793.195ENSANAG00000024424RBMS110097.826Aotus_nancymaae
ENSODEG00000013934RBMS110072.751ENSACLG00000013048RBMS19674.479Astatotilapia_calliptera
ENSODEG00000013934RBMS19462.604ENSACLG00000021512rbms1a9065.698Astatotilapia_calliptera
ENSODEG00000013934RBMS110074.359ENSAMXG00000009969RBMS110075.245Astyanax_mexicanus
ENSODEG00000013934RBMS19570.109ENSAMXG00000002146rbms1a8873.295Astyanax_mexicanus
ENSODEG00000013934RBMS110097.686ENSBTAG00000005180RBMS110094.313Bos_taurus
ENSODEG00000013934RBMS110091.710ENSCJAG00000012871-9995.442Callithrix_jacchus
ENSODEG00000013934RBMS19988.220ENSCJAG00000022465-9891.557Callithrix_jacchus
ENSODEG00000013934RBMS110098.030ENSCJAG00000014861-10098.030Callithrix_jacchus
ENSODEG00000013934RBMS110098.964ENSCAFG00000009922RBMS19597.917Canis_familiaris
ENSODEG00000013934RBMS110099.256ENSCAFG00020006120RBMS110099.256Canis_lupus_dingo
ENSODEG00000013934RBMS110098.759ENSCHIG00000023380RBMS110098.759Capra_hircus
ENSODEG00000013934RBMS110098.522ENSTSYG00000005584RBMS110099.189Carlito_syrichta
ENSODEG00000013934RBMS110099.752ENSCPOG00000012310RBMS110099.752Cavia_porcellus
ENSODEG00000013934RBMS110098.030ENSCCAG00000033841RBMS110098.030Cebus_capucinus
ENSODEG00000013934RBMS110098.705ENSCATG00000043032RBMS110099.189Cercocebus_atys
ENSODEG00000013934RBMS1100100.000ENSCLAG00000003031RBMS1100100.000Chinchilla_lanigera
ENSODEG00000013934RBMS110098.522ENSCSAG00000015687RBMS110098.522Chlorocebus_sabaeus
ENSODEG00000013934RBMS15497.761ENSCHOG00000001579RBMS17397.761Choloepus_hoffmanni
ENSODEG00000013934RBMS110093.103ENSCPBG00000026455RBMS110093.103Chrysemys_picta_bellii
ENSODEG00000013934RBMS110098.522ENSCANG00000042152RBMS110099.189Colobus_angolensis_palliatus
ENSODEG00000013934RBMS110098.263ENSCGRG00001022833Rbms110098.263Cricetulus_griseus_chok1gshd
ENSODEG00000013934RBMS110098.263ENSCGRG00000008824Rbms110098.263Cricetulus_griseus_crigri
ENSODEG00000013934RBMS19760.106ENSCSEG00000000889rbms1a9063.372Cynoglossus_semilaevis
ENSODEG00000013934RBMS110070.588ENSCSEG00000010652RBMS19473.295Cynoglossus_semilaevis
ENSODEG00000013934RBMS110070.951ENSCVAG00000002027RBMS19675.284Cyprinodon_variegatus
ENSODEG00000013934RBMS19762.234ENSCVAG00000014698rbms1a8965.407Cyprinodon_variegatus
ENSODEG00000013934RBMS19569.837ENSDARG00000074023rbms1a8773.011Danio_rerio
ENSODEG00000013934RBMS110097.429ENSDNOG00000040691RBMS110097.429Dasypus_novemcinctus
ENSODEG00000013934RBMS110099.256ENSDORG00000007103Rbms110099.256Dipodomys_ordii
ENSODEG00000013934RBMS19485.827ENSETEG00000012135RBMS110085.827Echinops_telfairi
ENSODEG00000013934RBMS110097.429ENSEASG00005023132RBMS110094.313Equus_asinus_asinus
ENSODEG00000013934RBMS110098.187ENSECAG00000019894RBMS110098.030Equus_caballus
ENSODEG00000013934RBMS179100.000ENSEEUG00000005628RBMS179100.000Erinaceus_europaeus
ENSODEG00000013934RBMS19370.526ENSELUG00000019328RBMS19470.526Esox_lucius
ENSODEG00000013934RBMS19963.896ENSELUG00000018923rbms1a9468.286Esox_lucius
ENSODEG00000013934RBMS110098.276ENSFCAG00000012524RBMS110098.919Felis_catus
ENSODEG00000013934RBMS19588.767ENSFALG00000004440RBMS19492.837Ficedula_albicollis
ENSODEG00000013934RBMS110099.752ENSFDAG00000015692RBMS110099.752Fukomys_damarensis
ENSODEG00000013934RBMS19762.500ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSODEG00000013934RBMS19571.467ENSFHEG00000000720RBMS18974.716Fundulus_heteroclitus
ENSODEG00000013934RBMS19063.793ENSGMOG00000000525rbms1a9963.056Gadus_morhua
ENSODEG00000013934RBMS19492.876ENSGALG00000011132RBMS19592.876Gallus_gallus
ENSODEG00000013934RBMS19472.917ENSGAFG00000007708RBMS18874.432Gambusia_affinis
ENSODEG00000013934RBMS19762.234ENSGAFG00000011633rbms1a9565.698Gambusia_affinis
ENSODEG00000013934RBMS19572.629ENSGACG00000005671RBMS18976.136Gasterosteus_aculeatus
ENSODEG00000013934RBMS19762.500ENSGACG00000015174rbms1a9166.873Gasterosteus_aculeatus
ENSODEG00000013934RBMS110092.857ENSGAGG00000007866RBMS110092.857Gopherus_agassizii
ENSODEG00000013934RBMS110098.446ENSGGOG00000001264RBMS110098.919Gorilla_gorilla
ENSODEG00000013934RBMS19594.792ENSGGOG00000043756-9594.792Gorilla_gorilla
ENSODEG00000013934RBMS19462.604ENSHBUG00000004802rbms1a9065.698Haplochromis_burtoni
ENSODEG00000013934RBMS18876.880ENSHBUG00000004516RBMS19278.348Haplochromis_burtoni
ENSODEG00000013934RBMS110099.007ENSHGLG00000010387RBMS110099.007Heterocephalus_glaber_female
ENSODEG00000013934RBMS110098.705ENSHGLG00100014105RBMS19898.705Heterocephalus_glaber_male
ENSODEG00000013934RBMS19760.638ENSHCOG00000020097rbms1a8963.953Hippocampus_comes
ENSODEG00000013934RBMS19374.468ENSHCOG00000016668RBMS19474.468Hippocampus_comes
ENSODEG00000013934RBMS110077.150ENSIPUG00000014677RBMS110077.150Ictalurus_punctatus
ENSODEG00000013934RBMS19570.109ENSIPUG00000010131RBMS18873.295Ictalurus_punctatus
ENSODEG00000013934RBMS110099.504ENSSTOG00000012501RBMS110099.504Ictidomys_tridecemlineatus
ENSODEG00000013934RBMS110099.007ENSJJAG00000016543Rbms110099.007Jaculus_jaculus
ENSODEG00000013934RBMS19377.926ENSKMAG00000013911RBMS19477.926Kryptolebias_marmoratus
ENSODEG00000013934RBMS19761.273ENSKMAG00000011839-8964.638Kryptolebias_marmoratus
ENSODEG00000013934RBMS19762.500ENSLBEG00000025962rbms1a8965.988Labrus_bergylta
ENSODEG00000013934RBMS19376.862ENSLBEG00000005787RBMS19476.862Labrus_bergylta
ENSODEG00000013934RBMS110078.517ENSLACG00000004324RBMS110075.601Latimeria_chalumnae
ENSODEG00000013934RBMS19384.574ENSLOCG00000008622rbms1a9484.574Lepisosteus_oculatus
ENSODEG00000013934RBMS110094.301ENSLAFG00000017217RBMS110098.153Loxodonta_africana
ENSODEG00000013934RBMS110098.522ENSMFAG00000000274RBMS110099.189Macaca_fascicularis
ENSODEG00000013934RBMS110098.705ENSMMUG00000016825RBMS110098.522Macaca_mulatta
ENSODEG00000013934RBMS110098.522ENSMNEG00000039425RBMS110099.189Macaca_nemestrina
ENSODEG00000013934RBMS110094.819ENSMLEG00000031517RBMS110098.919Mandrillus_leucophaeus
ENSODEG00000013934RBMS19572.087ENSMAMG00000003159-9275.783Mastacembelus_armatus
ENSODEG00000013934RBMS19760.372ENSMAMG00000005018rbms1a8963.663Mastacembelus_armatus
ENSODEG00000013934RBMS18873.837ENSMZEG00005007313RBMS19177.676Maylandia_zebra
ENSODEG00000013934RBMS19462.604ENSMZEG00005005661rbms1a9065.698Maylandia_zebra
ENSODEG00000013934RBMS19588.043ENSMGAG00000011054RBMS110090.881Meleagris_gallopavo
ENSODEG00000013934RBMS110097.767ENSMAUG00000008550Rbms110097.767Mesocricetus_auratus
ENSODEG00000013934RBMS110098.187ENSMICG00000008325RBMS110098.187Microcebus_murinus
ENSODEG00000013934RBMS110097.519ENSMOCG00000022617Rbms110097.519Microtus_ochrogaster
ENSODEG00000013934RBMS19475.781ENSMMOG00000003707RBMS19675.781Mola_mola
ENSODEG00000013934RBMS18565.350ENSMMOG00000018249rbms1a8169.799Mola_mola
ENSODEG00000013934RBMS110094.293ENSMODG00000005250RBMS110094.293Monodelphis_domestica
ENSODEG00000013934RBMS19761.702ENSMALG00000014235rbms1a8965.116Monopterus_albus
ENSODEG00000013934RBMS19074.359ENSMALG00000015715-8975.931Monopterus_albus
ENSODEG00000013934RBMS110097.270MGP_CAROLIEiJ_G0023586Rbms110097.270Mus_caroli
ENSODEG00000013934RBMS110097.270ENSMUSG00000026970Rbms110097.270Mus_musculus
ENSODEG00000013934RBMS110096.774MGP_PahariEiJ_G0025037Rbms110096.774Mus_pahari
ENSODEG00000013934RBMS110097.519MGP_SPRETEiJ_G0024508Rbms110097.519Mus_spretus
ENSODEG00000013934RBMS110098.446ENSMPUG00000000539RBMS110095.227Mustela_putorius_furo
ENSODEG00000013934RBMS110097.165ENSMLUG00000008762RBMS19397.165Myotis_lucifugus
ENSODEG00000013934RBMS110098.759ENSNGAG00000013636Rbms110098.759Nannospalax_galili
ENSODEG00000013934RBMS19569.377ENSNBRG00000015151RBMS19472.727Neolamprologus_brichardi
ENSODEG00000013934RBMS18264.557ENSNBRG00000020217rbms1a8568.333Neolamprologus_brichardi
ENSODEG00000013934RBMS110098.446ENSNLEG00000001667RBMS110098.919Nomascus_leucogenys
ENSODEG00000013934RBMS18775.740ENSMEUG00000000746RBMS110079.503Notamacropus_eugenii
ENSODEG00000013934RBMS110091.379ENSOPRG00000012431RBMS110091.379Ochotona_princeps
ENSODEG00000013934RBMS19462.881ENSONIG00000003329rbms1a8865.988Oreochromis_niloticus
ENSODEG00000013934RBMS19575.000ENSONIG00000008934RBMS19476.330Oreochromis_niloticus
ENSODEG00000013934RBMS15556.485ENSOANG00000004477-9957.500Ornithorhynchus_anatinus
ENSODEG00000013934RBMS19493.176ENSOANG00000006166RBMS19693.176Ornithorhynchus_anatinus
ENSODEG00000013934RBMS110094.041ENSOCUG00000017365RBMS18997.889Oryctolagus_cuniculus
ENSODEG00000013934RBMS19760.106ENSORLG00000003917rbms1a9063.372Oryzias_latipes
ENSODEG00000013934RBMS19073.011ENSORLG00000016818RBMS18974.504Oryzias_latipes
ENSODEG00000013934RBMS19072.727ENSORLG00020022335RBMS18974.221Oryzias_latipes_hni
ENSODEG00000013934RBMS19759.840ENSORLG00020018663rbms1a9063.081Oryzias_latipes_hni
ENSODEG00000013934RBMS19073.295ENSORLG00015018208RBMS18974.788Oryzias_latipes_hsok
ENSODEG00000013934RBMS19760.106ENSORLG00015016556rbms1a9063.478Oryzias_latipes_hsok
ENSODEG00000013934RBMS19073.504ENSOMEG00000002394RBMS19471.958Oryzias_melastigma
ENSODEG00000013934RBMS110093.606ENSOGAG00000002900RBMS110097.600Otolemur_garnettii
ENSODEG00000013934RBMS110098.759ENSOARG00000006870RBMS110098.759Ovis_aries
ENSODEG00000013934RBMS110098.446ENSPPAG00000040083RBMS110097.906Pan_paniscus
ENSODEG00000013934RBMS19394.149ENSPPAG00000036520-9994.149Pan_paniscus
ENSODEG00000013934RBMS110098.276ENSPPRG00000005040RBMS110098.919Panthera_pardus
ENSODEG00000013934RBMS110094.819ENSPTIG00000021240RBMS110098.919Panthera_tigris_altaica
ENSODEG00000013934RBMS19594.560ENSPTRG00000039358-10094.301Pan_troglodytes
ENSODEG00000013934RBMS110098.446ENSPTRG00000052304RBMS110098.276Pan_troglodytes
ENSODEG00000013934RBMS110099.256ENSPANG00000001383RBMS110099.256Papio_anubis
ENSODEG00000013934RBMS19574.457ENSPKIG00000012818rbms1a10075.062Paramormyrops_kingsleyae
ENSODEG00000013934RBMS110077.751ENSPKIG00000001498rbms1a10076.773Paramormyrops_kingsleyae
ENSODEG00000013934RBMS110094.045ENSPSIG00000010240RBMS110094.045Pelodiscus_sinensis
ENSODEG00000013934RBMS19458.287ENSPMGG00000004341rbms1a9061.159Periophthalmus_magnuspinnatus
ENSODEG00000013934RBMS18973.199ENSPMGG00000006310RBMS19568.421Periophthalmus_magnuspinnatus
ENSODEG00000013934RBMS110098.511ENSPEMG00000009449Rbms110098.511Peromyscus_maniculatus_bairdii
ENSODEG00000013934RBMS110094.293ENSPCIG00000018405RBMS110094.293Phascolarctos_cinereus
ENSODEG00000013934RBMS19871.930ENSPFOG00000017483RBMS19871.930Poecilia_formosa
ENSODEG00000013934RBMS19762.234ENSPFOG00000016116rbms1a8965.698Poecilia_formosa
ENSODEG00000013934RBMS19571.467ENSPLAG00000000920RBMS18874.716Poecilia_latipinna
ENSODEG00000013934RBMS19762.234ENSPLAG00000013864rbms1a8965.698Poecilia_latipinna
ENSODEG00000013934RBMS19762.234ENSPMEG00000016185rbms1a8965.698Poecilia_mexicana
ENSODEG00000013934RBMS19375.266ENSPMEG00000015838RBMS19475.266Poecilia_mexicana
ENSODEG00000013934RBMS19375.000ENSPREG00000008146RBMS19475.000Poecilia_reticulata
ENSODEG00000013934RBMS19762.234ENSPREG00000020161rbms1a8965.698Poecilia_reticulata
ENSODEG00000013934RBMS110097.429ENSPPYG00000012879-10094.313Pongo_abelii
ENSODEG00000013934RBMS110091.379ENSPCAG00000009673RBMS110091.379Procavia_capensis
ENSODEG00000013934RBMS110098.276ENSPCOG00000027294RBMS110098.919Propithecus_coquereli
ENSODEG00000013934RBMS18898.618ENSPVAG00000010429RBMS18798.618Pteropus_vampyrus
ENSODEG00000013934RBMS19575.000ENSPNYG00000002643RBMS19675.000Pundamilia_nyererei
ENSODEG00000013934RBMS110075.385ENSPNAG00000023479RBMS110075.980Pygocentrus_nattereri
ENSODEG00000013934RBMS19569.837ENSPNAG00000010225rbms1a8873.011Pygocentrus_nattereri
ENSODEG00000013934RBMS110097.519ENSRNOG00000008482Rbms110097.519Rattus_norvegicus
ENSODEG00000013934RBMS110098.276ENSRBIG00000044262RBMS110098.276Rhinopithecus_bieti
ENSODEG00000013934RBMS110097.943ENSRROG00000043108RBMS19998.429Rhinopithecus_roxellana
ENSODEG00000013934RBMS110097.429ENSSBOG00000034705RBMS110097.855Saimiri_boliviensis_boliviensis
ENSODEG00000013934RBMS110094.541ENSSHAG00000012271RBMS110094.541Sarcophilus_harrisii
ENSODEG00000013934RBMS19575.272ENSSFOG00015014493rbms1a9578.693Scleropages_formosus
ENSODEG00000013934RBMS19979.950ENSSFOG00015022929rbms19979.950Scleropages_formosus
ENSODEG00000013934RBMS19572.629ENSSMAG00000012152RBMS18778.593Scophthalmus_maximus
ENSODEG00000013934RBMS19462.327ENSSMAG00000012722rbms1a9565.407Scophthalmus_maximus
ENSODEG00000013934RBMS19762.500ENSSDUG00000020602rbms1a9565.988Seriola_dumerili
ENSODEG00000013934RBMS19377.926ENSSDUG00000018803RBMS19477.926Seriola_dumerili
ENSODEG00000013934RBMS19377.660ENSSLDG00000016556RBMS19477.660Seriola_lalandi_dorsalis
ENSODEG00000013934RBMS19762.500ENSSLDG00000009495rbms1a8965.988Seriola_lalandi_dorsalis
ENSODEG00000013934RBMS110068.719ENSSARG00000011085RBMS110068.719Sorex_araneus
ENSODEG00000013934RBMS19588.315ENSSPUG00000017163RBMS19492.330Sphenodon_punctatus
ENSODEG00000013934RBMS19762.234ENSSPAG00000005371rbms1a8965.698Stegastes_partitus
ENSODEG00000013934RBMS19378.191ENSSPAG00000000059RBMS19478.191Stegastes_partitus
ENSODEG00000013934RBMS110098.187ENSSSCG00000015888RBMS110094.988Sus_scrofa
ENSODEG00000013934RBMS110093.300ENSTGUG00000006606RBMS110093.300Taeniopygia_guttata
ENSODEG00000013934RBMS19571.274ENSTRUG00000005466-9672.280Takifugu_rubripes
ENSODEG00000013934RBMS19361.453ENSTRUG00000017155rbms1a8964.244Takifugu_rubripes
ENSODEG00000013934RBMS110070.951ENSTNIG00000016496RBMS19776.136Tetraodon_nigroviridis
ENSODEG00000013934RBMS19559.946ENSTNIG00000009477rbms1a9962.963Tetraodon_nigroviridis
ENSODEG00000013934RBMS110083.805ENSTBEG00000016156RBMS110087.402Tupaia_belangeri
ENSODEG00000013934RBMS110093.573ENSTTRG00000011058RBMS110097.638Tursiops_truncatus
ENSODEG00000013934RBMS110098.759ENSUAMG00000022331RBMS110098.759Ursus_americanus
ENSODEG00000013934RBMS110098.446ENSUMAG00000008605RBMS19898.421Ursus_maritimus
ENSODEG00000013934RBMS19496.063ENSVPAG00000002716RBMS110096.063Vicugna_pacos
ENSODEG00000013934RBMS110098.964ENSVVUG00000018682RBMS110099.459Vulpes_vulpes
ENSODEG00000013934RBMS110079.487ENSXETG00000016204rbms110081.723Xenopus_tropicalis
ENSODEG00000013934RBMS19571.467ENSXCOG00000000211RBMS19574.716Xiphophorus_couchianus
ENSODEG00000013934RBMS19759.043ENSXCOG00000001659rbms1a8962.209Xiphophorus_couchianus
ENSODEG00000013934RBMS19762.234ENSXMAG00000001802rbms1a8965.698Xiphophorus_maculatus
ENSODEG00000013934RBMS19374.734ENSXMAG00000011405RBMS19474.734Xiphophorus_maculatus

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