EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014018 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9590 bases
Position: chrJH651634.1:2772486-2782075
Accession: 101591707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019011	Exo_endo_phos	PF03372.23	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019251	TDP2-201	885	XM_004640145	ENSODEP00000019011	294 (aa)	XP_004640202	-

Gene Model

Click here to download ENSODEG00000014018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014018	TDP2	95	91.039	ENSG00000111802	TDP2	92	91.039	Homo_sapiens
ENSODEG00000014018	TDP2	89	53.008	ENSAPOG00000018379	-	91	53.008	Acanthochromis_polyacanthus
ENSODEG00000014018	TDP2	95	87.143	ENSAMEG00000010230	TDP2	100	87.143	Ailuropoda_melanoleuca
ENSODEG00000014018	TDP2	62	53.261	ENSAOCG00000010081	-	81	53.261	Amphiprion_ocellaris
ENSODEG00000014018	TDP2	86	52.734	ENSAPEG00000004208	-	91	52.734	Amphiprion_percula
ENSODEG00000014018	TDP2	95	47.703	ENSATEG00000010663	-	92	46.996	Anabas_testudineus
ENSODEG00000014018	TDP2	95	68.929	ENSACAG00000002332	TDP2	77	68.929	Anolis_carolinensis
ENSODEG00000014018	TDP2	95	89.928	ENSANAG00000020033	TDP2	77	89.928	Aotus_nancymaae
ENSODEG00000014018	TDP2	91	54.074	ENSACLG00000016148	tdp2b	95	54.074	Astatotilapia_calliptera
ENSODEG00000014018	TDP2	93	48.188	ENSACLG00000016174	tdp2b	93	48.188	Astatotilapia_calliptera
ENSODEG00000014018	TDP2	93	48.551	ENSACLG00000016132	tdp2b	93	48.551	Astatotilapia_calliptera
ENSODEG00000014018	TDP2	93	58.182	ENSAMXG00000011775	tdp2b	72	58.182	Astyanax_mexicanus
ENSODEG00000014018	TDP2	96	48.070	ENSAMXG00000036549	tdp2a	93	48.070	Astyanax_mexicanus
ENSODEG00000014018	TDP2	95	85.106	ENSBTAG00000000365	TDP2	77	85.106	Bos_taurus
ENSODEG00000014018	TDP2	83	33.333	WBGene00013405	tdpt-1	75	30.851	Caenorhabditis_elegans
ENSODEG00000014018	TDP2	99	88.014	ENSCJAG00000006074	TDP2	96	88.014	Callithrix_jacchus
ENSODEG00000014018	TDP2	95	89.568	ENSCJAG00000021963	-	77	89.568	Callithrix_jacchus
ENSODEG00000014018	TDP2	97	88.462	ENSCAFG00000010428	TDP2	98	88.462	Canis_familiaris
ENSODEG00000014018	TDP2	97	88.462	ENSCAFG00020009994	TDP2	98	88.462	Canis_lupus_dingo
ENSODEG00000014018	TDP2	98	86.159	ENSCHIG00000015294	-	98	86.159	Capra_hircus
ENSODEG00000014018	TDP2	95	89.286	ENSTSYG00000037199	TDP2	91	89.286	Carlito_syrichta
ENSODEG00000014018	TDP2	95	95.683	ENSCPOG00000006390	TDP2	78	95.683	Cavia_porcellus
ENSODEG00000014018	TDP2	99	88.014	ENSCCAG00000022734	TDP2	96	88.014	Cebus_capucinus
ENSODEG00000014018	TDP2	99	88.014	ENSCATG00000022076	TDP2	96	88.014	Cercocebus_atys
ENSODEG00000014018	TDP2	95	95.683	ENSCLAG00000002072	TDP2	78	95.683	Chinchilla_lanigera
ENSODEG00000014018	TDP2	95	90.714	ENSCSAG00000007769	TDP2	78	90.714	Chlorocebus_sabaeus
ENSODEG00000014018	TDP2	95	73.571	ENSCPBG00000006551	TDP2	71	73.571	Chrysemys_picta_bellii
ENSODEG00000014018	TDP2	98	88.581	ENSCANG00000040122	TDP2	95	88.581	Colobus_angolensis_palliatus
ENSODEG00000014018	TDP2	95	73.381	ENSCGRG00001000384	Tdp2	75	73.381	Cricetulus_griseus_chok1gshd
ENSODEG00000014018	TDP2	95	73.381	ENSCGRG00000010250	Tdp2	81	71.678	Cricetulus_griseus_crigri
ENSODEG00000014018	TDP2	93	56.159	ENSCVAG00000003114	tdp2b	74	56.159	Cyprinodon_variegatus
ENSODEG00000014018	TDP2	94	56.338	ENSDARG00000035954	tdp2b	73	56.338	Danio_rerio
ENSODEG00000014018	TDP2	98	44.983	ENSDARG00000069941	tdp2a	63	44.983	Danio_rerio
ENSODEG00000014018	TDP2	95	90.288	ENSDNOG00000044082	TDP2	76	90.288	Dasypus_novemcinctus
ENSODEG00000014018	TDP2	95	87.050	ENSETEG00000019096	TDP2	100	87.050	Echinops_telfairi
ENSODEG00000014018	TDP2	88	53.435	ENSEBUG00000006535	tdp2a	61	53.435	Eptatretus_burgeri
ENSODEG00000014018	TDP2	95	88.929	ENSEASG00005007656	TDP2	77	88.929	Equus_asinus_asinus
ENSODEG00000014018	TDP2	95	88.214	ENSECAG00000014264	TDP2	77	88.849	Equus_caballus
ENSODEG00000014018	TDP2	95	83.571	ENSEEUG00000010776	TDP2	77	83.571	Erinaceus_europaeus
ENSODEG00000014018	TDP2	98	45.051	ENSELUG00000009321	tdp2a	91	45.051	Esox_lucius
ENSODEG00000014018	TDP2	93	57.840	ENSELUG00000016449	tdp2b	76	57.840	Esox_lucius
ENSODEG00000014018	TDP2	95	88.214	ENSFCAG00000025612	TDP2	77	88.214	Felis_catus
ENSODEG00000014018	TDP2	95	65.827	ENSFALG00000004710	TDP2	77	65.827	Ficedula_albicollis
ENSODEG00000014018	TDP2	98	90.244	ENSFDAG00000006512	TDP2	99	90.244	Fukomys_damarensis
ENSODEG00000014018	TDP2	86	50.781	ENSFHEG00000013560	-	87	50.781	Fundulus_heteroclitus
ENSODEG00000014018	TDP2	95	70.504	ENSGALG00000013637	TDP2	75	70.504	Gallus_gallus
ENSODEG00000014018	TDP2	95	73.929	ENSGAGG00000002853	TDP2	71	73.929	Gopherus_agassizii
ENSODEG00000014018	TDP2	99	88.014	ENSGGOG00000014237	TDP2	96	88.014	Gorilla_gorilla
ENSODEG00000014018	TDP2	69	58.128	ENSHBUG00000005421	-	84	58.128	Haplochromis_burtoni
ENSODEG00000014018	TDP2	87	57.915	ENSHBUG00000002714	tdp2b	71	57.915	Haplochromis_burtoni
ENSODEG00000014018	TDP2	95	91.727	ENSHGLG00000008655	TDP2	77	91.727	Heterocephalus_glaber_female
ENSODEG00000014018	TDP2	95	91.727	ENSHGLG00100019087	TDP2	77	91.727	Heterocephalus_glaber_male
ENSODEG00000014018	TDP2	93	59.489	ENSIPUG00000013691	tdp2b	72	59.489	Ictalurus_punctatus
ENSODEG00000014018	TDP2	95	71.583	ENSJJAG00000021685	Tdp2	79	71.583	Jaculus_jaculus
ENSODEG00000014018	TDP2	88	51.341	ENSKMAG00000015485	-	84	51.341	Kryptolebias_marmoratus
ENSODEG00000014018	TDP2	95	64.748	ENSLACG00000008852	TDP2	76	64.748	Latimeria_chalumnae
ENSODEG00000014018	TDP2	94	59.783	ENSLOCG00000005817	tdp2b	98	59.783	Lepisosteus_oculatus
ENSODEG00000014018	TDP2	97	87.368	ENSLAFG00000002567	TDP2	81	87.368	Loxodonta_africana
ENSODEG00000014018	TDP2	99	88.699	ENSMFAG00000045296	TDP2	96	88.699	Macaca_fascicularis
ENSODEG00000014018	TDP2	95	91.071	ENSMMUG00000009803	TDP2	78	91.071	Macaca_mulatta
ENSODEG00000014018	TDP2	99	88.699	ENSMNEG00000038003	TDP2	96	88.699	Macaca_nemestrina
ENSODEG00000014018	TDP2	99	88.356	ENSMLEG00000028883	TDP2	96	88.356	Mandrillus_leucophaeus
ENSODEG00000014018	TDP2	90	58.427	ENSMAMG00000013654	tdp2b	73	58.427	Mastacembelus_armatus
ENSODEG00000014018	TDP2	87	57.143	ENSMZEG00005003950	tdp2b	71	57.143	Maylandia_zebra
ENSODEG00000014018	TDP2	98	47.423	ENSMZEG00005004126	tdp2b	95	47.423	Maylandia_zebra
ENSODEG00000014018	TDP2	85	51.984	ENSMZEG00005004055	tdp2b	83	51.984	Maylandia_zebra
ENSODEG00000014018	TDP2	95	51.786	ENSMZEG00005004153	tdp2b	97	51.786	Maylandia_zebra
ENSODEG00000014018	TDP2	87	48.649	ENSMZEG00005004103	tdp2b	86	48.649	Maylandia_zebra
ENSODEG00000014018	TDP2	87	55.598	ENSMZEG00005004077	tdp2b	87	55.598	Maylandia_zebra
ENSODEG00000014018	TDP2	84	46.774	ENSMZEG00005003980	-	80	46.774	Maylandia_zebra
ENSODEG00000014018	TDP2	95	71.583	ENSMGAG00000008014	TDP2	75	71.583	Meleagris_gallopavo
ENSODEG00000014018	TDP2	95	73.381	ENSMAUG00000014451	Tdp2	75	73.381	Mesocricetus_auratus
ENSODEG00000014018	TDP2	97	89.236	ENSMICG00000000039	TDP2	98	89.236	Microcebus_murinus
ENSODEG00000014018	TDP2	95	74.820	ENSMOCG00000002823	Tdp2	75	74.820	Microtus_ochrogaster
ENSODEG00000014018	TDP2	82	75.000	ENSMODG00000011653	TDP2	73	75.000	Monodelphis_domestica
ENSODEG00000014018	TDP2	83	53.659	ENSMALG00000005368	-	83	53.659	Monopterus_albus
ENSODEG00000014018	TDP2	95	75.899	MGP_CAROLIEiJ_G0018354	Tdp2	74	75.899	Mus_caroli
ENSODEG00000014018	TDP2	95	76.259	ENSMUSG00000035958	Tdp2	74	76.259	Mus_musculus
ENSODEG00000014018	TDP2	95	74.460	MGP_PahariEiJ_G0019417	Tdp2	74	74.460	Mus_pahari
ENSODEG00000014018	TDP2	95	75.899	MGP_SPRETEiJ_G0019220	Tdp2	74	75.899	Mus_spretus
ENSODEG00000014018	TDP2	95	88.214	ENSMPUG00000004516	TDP2	78	88.214	Mustela_putorius_furo
ENSODEG00000014018	TDP2	95	81.495	ENSMLUG00000013506	TDP2	78	81.495	Myotis_lucifugus
ENSODEG00000014018	TDP2	97	69.366	ENSNGAG00000001375	Tdp2	77	69.366	Nannospalax_galili
ENSODEG00000014018	TDP2	99	88.356	ENSNLEG00000002447	TDP2	93	88.356	Nomascus_leucogenys
ENSODEG00000014018	TDP2	95	88.129	ENSOPRG00000016299	TDP2	80	88.129	Ochotona_princeps
ENSODEG00000014018	TDP2	95	89.643	ENSOCUG00000013773	TDP2	78	89.643	Oryctolagus_cuniculus
ENSODEG00000014018	TDP2	88	48.855	ENSORLG00000001661	-	96	48.855	Oryzias_latipes
ENSODEG00000014018	TDP2	88	48.855	ENSORLG00020004634	-	96	48.855	Oryzias_latipes_hni
ENSODEG00000014018	TDP2	89	43.939	ENSORLG00015008190	-	96	43.939	Oryzias_latipes_hsok
ENSODEG00000014018	TDP2	88	48.276	ENSOMEG00000015899	-	92	49.194	Oryzias_melastigma
ENSODEG00000014018	TDP2	95	86.691	ENSOGAG00000025303	TDP2	76	86.691	Otolemur_garnettii
ENSODEG00000014018	TDP2	99	88.356	ENSPPAG00000029023	TDP2	97	88.356	Pan_paniscus
ENSODEG00000014018	TDP2	95	87.500	ENSPPRG00000015398	TDP2	77	87.500	Panthera_pardus
ENSODEG00000014018	TDP2	95	88.489	ENSPTIG00000018574	TDP2	95	88.489	Panthera_tigris_altaica
ENSODEG00000014018	TDP2	99	88.699	ENSPTRG00000017778	TDP2	96	88.699	Pan_troglodytes
ENSODEG00000014018	TDP2	99	87.671	ENSPANG00000017590	TDP2	96	87.671	Papio_anubis
ENSODEG00000014018	TDP2	95	56.184	ENSPKIG00000006483	tdp2b	76	56.184	Paramormyrops_kingsleyae
ENSODEG00000014018	TDP2	95	72.760	ENSPSIG00000004948	TDP2	96	72.760	Pelodiscus_sinensis
ENSODEG00000014018	TDP2	95	76.259	ENSPEMG00000001788	Tdp2	74	76.259	Peromyscus_maniculatus_bairdii
ENSODEG00000014018	TDP2	85	46.816	ENSPMAG00000001570	tdp2b	97	46.816	Petromyzon_marinus
ENSODEG00000014018	TDP2	96	74.113	ENSPCIG00000007316	TDP2	74	74.113	Phascolarctos_cinereus
ENSODEG00000014018	TDP2	84	50.000	ENSPFOG00000017990	-	90	50.000	Poecilia_formosa
ENSODEG00000014018	TDP2	84	49.600	ENSPLAG00000019439	-	79	49.600	Poecilia_latipinna
ENSODEG00000014018	TDP2	84	50.400	ENSPMEG00000010824	-	84	50.400	Poecilia_mexicana
ENSODEG00000014018	TDP2	95	90.000	ENSPPYG00000016282	TDP2	71	90.000	Pongo_abelii
ENSODEG00000014018	TDP2	95	91.367	ENSPCOG00000021415	TDP2	98	91.367	Propithecus_coquereli
ENSODEG00000014018	TDP2	95	48.311	ENSPNYG00000011504	tdp2b	95	48.311	Pundamilia_nyererei
ENSODEG00000014018	TDP2	59	51.163	ENSPNYG00000001944	-	72	50.867	Pundamilia_nyererei
ENSODEG00000014018	TDP2	87	55.985	ENSPNYG00000011532	tdp2b	71	55.985	Pundamilia_nyererei
ENSODEG00000014018	TDP2	86	52.381	ENSPNAG00000022162	tdp2a	64	52.381	Pygocentrus_nattereri
ENSODEG00000014018	TDP2	95	74.460	ENSRNOG00000018246	Tdp2	75	74.460	Rattus_norvegicus
ENSODEG00000014018	TDP2	98	88.581	ENSRBIG00000037119	TDP2	95	88.581	Rhinopithecus_bieti
ENSODEG00000014018	TDP2	98	88.235	ENSRROG00000005025	TDP2	95	88.235	Rhinopithecus_roxellana
ENSODEG00000014018	TDP2	95	91.007	ENSSBOG00000028734	TDP2	91	91.007	Saimiri_boliviensis_boliviensis
ENSODEG00000014018	TDP2	96	73.852	ENSSHAG00000002506	TDP2	76	73.852	Sarcophilus_harrisii
ENSODEG00000014018	TDP2	86	52.362	ENSSFOG00015011322	-	71	52.362	Scleropages_formosus
ENSODEG00000014018	TDP2	95	79.211	ENSSARG00000013547	TDP2	100	79.211	Sorex_araneus
ENSODEG00000014018	TDP2	95	69.097	ENSSPUG00000008288	TDP2	78	69.097	Sphenodon_punctatus
ENSODEG00000014018	TDP2	95	88.929	ENSSSCG00000001092	TDP2	77	88.929	Sus_scrofa
ENSODEG00000014018	TDP2	89	68.966	ENSTGUG00000009035	TDP2	100	68.966	Taeniopygia_guttata
ENSODEG00000014018	TDP2	88	58.238	ENSTRUG00000014347	tdp2b	72	58.238	Takifugu_rubripes
ENSODEG00000014018	TDP2	88	52.490	ENSTRUG00000012218	-	91	52.490	Takifugu_rubripes
ENSODEG00000014018	TDP2	89	58.935	ENSTNIG00000017792	tdp2b	73	58.935	Tetraodon_nigroviridis
ENSODEG00000014018	TDP2	86	53.640	ENSTNIG00000010260	TDP2	99	53.640	Tetraodon_nigroviridis
ENSODEG00000014018	TDP2	95	88.849	ENSTTRG00000016376	TDP2	77	88.849	Tursiops_truncatus
ENSODEG00000014018	TDP2	95	87.455	ENSUAMG00000025939	TDP2	80	87.455	Ursus_americanus
ENSODEG00000014018	TDP2	99	84.589	ENSUMAG00000020111	TDP2	97	84.589	Ursus_maritimus
ENSODEG00000014018	TDP2	95	67.143	ENSXETG00000014826	tdp2	75	67.143	Xenopus_tropicalis
ENSODEG00000014018	TDP2	84	50.598	ENSXCOG00000010778	-	69	50.598	Xiphophorus_couchianus
ENSODEG00000014018	TDP2	84	50.598	ENSXMAG00000022252	-	72	50.598	Xiphophorus_maculatus