EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014154 (Gene tree)
Gene ID: 101569400
Gene Symbol: SF3B3
Alias: -
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 43519 bases
Position: chrJH651526.1:8033964-8077482
Accession: 101569400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019189	CPSF_A	PF03178.15	3.7e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019432	SF3B3-201	4175	XM_004625795	ENSODEP00000019189	1217 (aa)	XP_004625852	UPI000333935F

Gene Model

Click here to download ENSODEG00000014154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014154	SF3B3	100	99.918	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSODEG00000014154	SF3B3	96	93.510	ENSAPOG00000006172	sf3b3	98	93.510	Acanthochromis_polyacanthus
ENSODEG00000014154	SF3B3	100	99.590	ENSAMEG00000002187	SF3B3	100	99.590	Ailuropoda_melanoleuca
ENSODEG00000014154	SF3B3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
ENSODEG00000014154	SF3B3	100	93.426	ENSAOCG00000007158	sf3b3	100	93.426	Amphiprion_ocellaris
ENSODEG00000014154	SF3B3	100	93.426	ENSAPEG00000022786	sf3b3	100	93.426	Amphiprion_percula
ENSODEG00000014154	SF3B3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
ENSODEG00000014154	SF3B3	81	98.176	ENSAPLG00000004996	SF3B3	100	98.176	Anas_platyrhynchos
ENSODEG00000014154	SF3B3	100	98.521	ENSACAG00000001817	SF3B3	100	98.521	Anolis_carolinensis
ENSODEG00000014154	SF3B3	100	99.918	ENSANAG00000028001	SF3B3	100	99.918	Aotus_nancymaae
ENSODEG00000014154	SF3B3	96	93.168	ENSACLG00000022555	sf3b3	98	93.168	Astatotilapia_calliptera
ENSODEG00000014154	SF3B3	100	93.180	ENSAMXG00000003410	sf3b3	100	93.180	Astyanax_mexicanus
ENSODEG00000014154	SF3B3	100	99.918	ENSBTAG00000010627	SF3B3	100	99.918	Bos_taurus
ENSODEG00000014154	SF3B3	100	60.537	WBGene00019323	teg-4	100	60.537	Caenorhabditis_elegans
ENSODEG00000014154	SF3B3	100	99.918	ENSCJAG00000014773	SF3B3	99	99.918	Callithrix_jacchus
ENSODEG00000014154	SF3B3	100	99.836	ENSCAFG00000020151	SF3B3	100	99.836	Canis_familiaris
ENSODEG00000014154	SF3B3	100	99.836	ENSCAFG00020020912	SF3B3	100	99.836	Canis_lupus_dingo
ENSODEG00000014154	SF3B3	100	99.836	ENSCHIG00000019822	SF3B3	100	99.836	Capra_hircus
ENSODEG00000014154	SF3B3	100	99.918	ENSTSYG00000007910	SF3B3	100	99.918	Carlito_syrichta
ENSODEG00000014154	SF3B3	84	89.016	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSODEG00000014154	SF3B3	100	98.603	ENSCPOG00000000586	SF3B3	100	98.603	Cavia_porcellus
ENSODEG00000014154	SF3B3	100	99.918	ENSCCAG00000017736	SF3B3	100	99.918	Cebus_capucinus
ENSODEG00000014154	SF3B3	100	99.918	ENSCATG00000036562	SF3B3	100	99.918	Cercocebus_atys
ENSODEG00000014154	SF3B3	100	99.918	ENSCLAG00000003921	SF3B3	100	99.918	Chinchilla_lanigera
ENSODEG00000014154	SF3B3	100	100.000	ENSCSAG00000004371	SF3B3	100	100.000	Chlorocebus_sabaeus
ENSODEG00000014154	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSODEG00000014154	SF3B3	100	98.767	ENSCPBG00000015853	SF3B3	100	98.767	Chrysemys_picta_bellii
ENSODEG00000014154	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSODEG00000014154	SF3B3	99	79.475	ENSCSAVG00000011454	-	100	79.475	Ciona_savignyi
ENSODEG00000014154	SF3B3	100	96.795	ENSCANG00000042920	SF3B3	100	96.795	Colobus_angolensis_palliatus
ENSODEG00000014154	SF3B3	100	99.836	ENSCGRG00001015908	Sf3b3	100	99.836	Cricetulus_griseus_chok1gshd
ENSODEG00000014154	SF3B3	100	99.836	ENSCGRG00000010180	Sf3b3	100	99.836	Cricetulus_griseus_crigri
ENSODEG00000014154	SF3B3	82	92.515	ENSCSEG00000014192	sf3b3	99	92.515	Cynoglossus_semilaevis
ENSODEG00000014154	SF3B3	100	92.605	ENSCVAG00000010459	sf3b3	100	92.605	Cyprinodon_variegatus
ENSODEG00000014154	SF3B3	100	93.426	ENSDARG00000103553	sf3b3	100	93.426	Danio_rerio
ENSODEG00000014154	SF3B3	85	99.904	ENSDNOG00000043626	SF3B3	100	99.904	Dasypus_novemcinctus
ENSODEG00000014154	SF3B3	100	99.918	ENSDORG00000014176	Sf3b3	100	99.918	Dipodomys_ordii
ENSODEG00000014154	SF3B3	100	75.143	FBgn0035162	Sf3b3	100	75.143	Drosophila_melanogaster
ENSODEG00000014154	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSODEG00000014154	SF3B3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
ENSODEG00000014154	SF3B3	100	99.836	ENSEASG00005013376	SF3B3	100	99.836	Equus_asinus_asinus
ENSODEG00000014154	SF3B3	100	99.836	ENSECAG00000014053	SF3B3	100	99.836	Equus_caballus
ENSODEG00000014154	SF3B3	93	99.821	ENSEEUG00000015611	SF3B3	93	99.821	Erinaceus_europaeus
ENSODEG00000014154	SF3B3	100	91.393	ENSELUG00000015417	sf3b3	100	91.393	Esox_lucius
ENSODEG00000014154	SF3B3	100	99.836	ENSFCAG00000009487	SF3B3	100	99.836	Felis_catus
ENSODEG00000014154	SF3B3	100	99.014	ENSFALG00000007372	SF3B3	100	99.014	Ficedula_albicollis
ENSODEG00000014154	SF3B3	100	100.000	ENSFDAG00000002608	SF3B3	100	100.000	Fukomys_damarensis
ENSODEG00000014154	SF3B3	100	93.016	ENSFHEG00000017824	sf3b3	100	93.016	Fundulus_heteroclitus
ENSODEG00000014154	SF3B3	100	89.409	ENSGMOG00000008139	sf3b3	100	89.409	Gadus_morhua
ENSODEG00000014154	SF3B3	100	99.178	ENSGALG00000002531	SF3B3	100	99.178	Gallus_gallus
ENSODEG00000014154	SF3B3	100	92.605	ENSGAFG00000015206	sf3b3	100	92.605	Gambusia_affinis
ENSODEG00000014154	SF3B3	100	93.021	ENSGACG00000002646	sf3b3	100	93.021	Gasterosteus_aculeatus
ENSODEG00000014154	SF3B3	96	98.804	ENSGAGG00000006746	SF3B3	97	98.804	Gopherus_agassizii
ENSODEG00000014154	SF3B3	100	99.918	ENSGGOG00000003246	SF3B3	100	99.918	Gorilla_gorilla
ENSODEG00000014154	SF3B3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
ENSODEG00000014154	SF3B3	100	99.918	ENSHGLG00000010135	SF3B3	100	99.918	Heterocephalus_glaber_female
ENSODEG00000014154	SF3B3	100	97.729	ENSHGLG00100011148	SF3B3	100	97.729	Heterocephalus_glaber_male
ENSODEG00000014154	SF3B3	100	92.687	ENSHCOG00000011981	sf3b3	100	92.687	Hippocampus_comes
ENSODEG00000014154	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSODEG00000014154	SF3B3	100	99.918	ENSSTOG00000007065	SF3B3	100	99.918	Ictidomys_tridecemlineatus
ENSODEG00000014154	SF3B3	100	99.918	ENSJJAG00000003948	Sf3b3	100	99.918	Jaculus_jaculus
ENSODEG00000014154	SF3B3	100	90.797	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
ENSODEG00000014154	SF3B3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
ENSODEG00000014154	SF3B3	98	92.193	ENSLACG00000012501	SF3B3	99	92.193	Latimeria_chalumnae
ENSODEG00000014154	SF3B3	100	94.089	ENSLOCG00000007566	sf3b3	100	94.089	Lepisosteus_oculatus
ENSODEG00000014154	SF3B3	100	99.836	ENSLAFG00000012219	SF3B3	100	99.836	Loxodonta_africana
ENSODEG00000014154	SF3B3	100	99.918	ENSMFAG00000045487	SF3B3	100	99.918	Macaca_fascicularis
ENSODEG00000014154	SF3B3	100	99.918	ENSMMUG00000017812	SF3B3	100	99.918	Macaca_mulatta
ENSODEG00000014154	SF3B3	100	99.918	ENSMNEG00000033385	SF3B3	100	99.918	Macaca_nemestrina
ENSODEG00000014154	SF3B3	100	96.385	ENSMLEG00000043891	SF3B3	97	99.682	Mandrillus_leucophaeus
ENSODEG00000014154	SF3B3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
ENSODEG00000014154	SF3B3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
ENSODEG00000014154	SF3B3	89	90.194	ENSMZEG00005026015	sf3b3	99	90.194	Maylandia_zebra
ENSODEG00000014154	SF3B3	100	99.178	ENSMGAG00000001597	SF3B3	100	99.178	Meleagris_gallopavo
ENSODEG00000014154	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSODEG00000014154	SF3B3	100	98.769	ENSMICG00000001363	SF3B3	100	98.769	Microcebus_murinus
ENSODEG00000014154	SF3B3	100	99.836	ENSMOCG00000006108	Sf3b3	100	99.836	Microtus_ochrogaster
ENSODEG00000014154	SF3B3	89	90.564	ENSMMOG00000002598	sf3b3	97	90.564	Mola_mola
ENSODEG00000014154	SF3B3	100	95.402	ENSMODG00000014363	SF3B3	100	95.402	Monodelphis_domestica
ENSODEG00000014154	SF3B3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
ENSODEG00000014154	SF3B3	100	99.753	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	Mus_caroli
ENSODEG00000014154	SF3B3	100	99.836	ENSMUSG00000033732	Sf3b3	100	99.836	Mus_musculus
ENSODEG00000014154	SF3B3	100	99.753	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.753	Mus_spretus
ENSODEG00000014154	SF3B3	100	99.836	ENSMPUG00000010277	SF3B3	100	99.836	Mustela_putorius_furo
ENSODEG00000014154	SF3B3	100	99.753	ENSMLUG00000014607	SF3B3	100	99.753	Myotis_lucifugus
ENSODEG00000014154	SF3B3	100	99.918	ENSNGAG00000021903	Sf3b3	100	99.918	Nannospalax_galili
ENSODEG00000014154	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSODEG00000014154	SF3B3	100	98.440	ENSNLEG00000016127	SF3B3	99	99.682	Nomascus_leucogenys
ENSODEG00000014154	SF3B3	92	99.208	ENSMEUG00000004479	SF3B3	94	99.208	Notamacropus_eugenii
ENSODEG00000014154	SF3B3	98	96.647	ENSOPRG00000009847	SF3B3	100	96.647	Ochotona_princeps
ENSODEG00000014154	SF3B3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
ENSODEG00000014154	SF3B3	100	99.753	ENSOANG00000001161	-	100	99.753	Ornithorhynchus_anatinus
ENSODEG00000014154	SF3B3	100	97.535	ENSOCUG00000004139	SF3B3	100	97.535	Oryctolagus_cuniculus
ENSODEG00000014154	SF3B3	100	93.180	ENSORLG00000013472	sf3b3	100	93.180	Oryzias_latipes
ENSODEG00000014154	SF3B3	100	93.180	ENSORLG00020017473	sf3b3	100	93.180	Oryzias_latipes_hni
ENSODEG00000014154	SF3B3	100	93.180	ENSORLG00015007710	sf3b3	100	93.180	Oryzias_latipes_hsok
ENSODEG00000014154	SF3B3	100	92.851	ENSOMEG00000014483	sf3b3	100	92.851	Oryzias_melastigma
ENSODEG00000014154	SF3B3	100	99.508	ENSOGAG00000016051	SF3B3	100	99.508	Otolemur_garnettii
ENSODEG00000014154	SF3B3	100	99.590	ENSOARG00000004816	SF3B3	100	99.590	Ovis_aries
ENSODEG00000014154	SF3B3	100	99.918	ENSPPAG00000026807	SF3B3	100	99.918	Pan_paniscus
ENSODEG00000014154	SF3B3	100	99.836	ENSPPRG00000001686	SF3B3	100	99.836	Panthera_pardus
ENSODEG00000014154	SF3B3	89	96.780	ENSPTIG00000020382	SF3B3	100	96.780	Panthera_tigris_altaica
ENSODEG00000014154	SF3B3	100	99.918	ENSPTRG00000008308	SF3B3	100	99.918	Pan_troglodytes
ENSODEG00000014154	SF3B3	100	99.918	ENSPANG00000024075	SF3B3	100	99.918	Papio_anubis
ENSODEG00000014154	SF3B3	100	92.769	ENSPKIG00000002712	sf3b3	100	92.769	Paramormyrops_kingsleyae
ENSODEG00000014154	SF3B3	89	99.080	ENSPSIG00000002232	SF3B3	100	99.080	Pelodiscus_sinensis
ENSODEG00000014154	SF3B3	100	99.836	ENSPEMG00000008603	Sf3b3	100	99.836	Peromyscus_maniculatus_bairdii
ENSODEG00000014154	SF3B3	100	91.865	ENSPMAG00000001793	sf3b3	100	91.865	Petromyzon_marinus
ENSODEG00000014154	SF3B3	100	99.753	ENSPCIG00000014927	SF3B3	100	99.753	Phascolarctos_cinereus
ENSODEG00000014154	SF3B3	100	92.687	ENSPFOG00000015516	sf3b3	100	92.687	Poecilia_formosa
ENSODEG00000014154	SF3B3	100	92.687	ENSPLAG00000014330	sf3b3	100	92.687	Poecilia_latipinna
ENSODEG00000014154	SF3B3	100	92.769	ENSPMEG00000019856	sf3b3	100	92.769	Poecilia_mexicana
ENSODEG00000014154	SF3B3	81	93.598	ENSPREG00000019669	sf3b3	97	93.598	Poecilia_reticulata
ENSODEG00000014154	SF3B3	95	99.805	ENSPPYG00000007539	SF3B3	100	99.805	Pongo_abelii
ENSODEG00000014154	SF3B3	100	78.143	ENSPCAG00000002623	SF3B3	100	78.143	Procavia_capensis
ENSODEG00000014154	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSODEG00000014154	SF3B3	100	99.753	ENSPVAG00000000684	SF3B3	100	99.753	Pteropus_vampyrus
ENSODEG00000014154	SF3B3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
ENSODEG00000014154	SF3B3	100	93.509	ENSPNAG00000015419	sf3b3	100	93.509	Pygocentrus_nattereri
ENSODEG00000014154	SF3B3	100	99.836	ENSRNOG00000017724	Sf3b3	100	99.836	Rattus_norvegicus
ENSODEG00000014154	SF3B3	100	99.918	ENSRBIG00000021904	SF3B3	100	99.918	Rhinopithecus_bieti
ENSODEG00000014154	SF3B3	100	99.918	ENSRROG00000045703	SF3B3	100	99.918	Rhinopithecus_roxellana
ENSODEG00000014154	SF3B3	100	99.918	ENSSBOG00000029156	SF3B3	100	99.918	Saimiri_boliviensis_boliviensis
ENSODEG00000014154	SF3B3	100	99.753	ENSSHAG00000000372	SF3B3	100	99.753	Sarcophilus_harrisii
ENSODEG00000014154	SF3B3	100	93.755	ENSSFOG00015012877	sf3b3	100	93.755	Scleropages_formosus
ENSODEG00000014154	SF3B3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
ENSODEG00000014154	SF3B3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
ENSODEG00000014154	SF3B3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
ENSODEG00000014154	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSODEG00000014154	SF3B3	100	99.014	ENSSPUG00000006253	SF3B3	100	99.014	Sphenodon_punctatus
ENSODEG00000014154	SF3B3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
ENSODEG00000014154	SF3B3	100	99.836	ENSSSCG00000025323	SF3B3	100	99.836	Sus_scrofa
ENSODEG00000014154	SF3B3	100	99.179	ENSTGUG00000006082	SF3B3	100	99.179	Taeniopygia_guttata
ENSODEG00000014154	SF3B3	89	93.107	ENSTNIG00000004857	sf3b3	100	93.107	Tetraodon_nigroviridis
ENSODEG00000014154	SF3B3	93	84.771	ENSTBEG00000002946	SF3B3	100	84.771	Tupaia_belangeri
ENSODEG00000014154	SF3B3	100	99.014	ENSTTRG00000005855	SF3B3	100	99.014	Tursiops_truncatus
ENSODEG00000014154	SF3B3	100	99.836	ENSUAMG00000006780	SF3B3	100	99.836	Ursus_americanus
ENSODEG00000014154	SF3B3	100	99.836	ENSUMAG00000017757	SF3B3	100	99.836	Ursus_maritimus
ENSODEG00000014154	SF3B3	100	83.648	ENSVPAG00000003202	SF3B3	100	83.648	Vicugna_pacos
ENSODEG00000014154	SF3B3	100	99.753	ENSVVUG00000017922	SF3B3	100	99.753	Vulpes_vulpes
ENSODEG00000014154	SF3B3	100	96.631	ENSXETG00000032869	SF3B3	100	96.631	Xenopus_tropicalis
ENSODEG00000014154	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSODEG00000014154	SF3B3	100	92.687	ENSXMAG00000006334	sf3b3	99	93.801	Xiphophorus_maculatus