EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014185 (Gene tree)
Gene ID: 101559626
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 46645 bases
Position: chrJH651532.1:3497446-3544090
Accession: 101559626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019233	zf-CCCH	PF00642.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019476	RC3H1-201	3396	XM_004626792	ENSODEP00000019233	1131 (aa)	XP_004626849	UPI0003338044

Gene Model

Click here to download ENSODEG00000014185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014185	RC3H1	100	94.533	ENSG00000135870	RC3H1	100	94.533	Homo_sapiens
ENSODEG00000014185	RC3H1	100	94.086	ENSAMEG00000015657	RC3H1	100	94.086	Ailuropoda_melanoleuca
ENSODEG00000014185	RC3H1	100	86.736	ENSAPLG00000005341	RC3H1	100	86.736	Anas_platyrhynchos
ENSODEG00000014185	RC3H1	100	84.031	ENSACAG00000015271	RC3H1	100	84.017	Anolis_carolinensis
ENSODEG00000014185	RC3H1	100	94.533	ENSANAG00000036716	RC3H1	100	94.621	Aotus_nancymaae
ENSODEG00000014185	RC3H1	100	93.386	ENSBTAG00000052708	RC3H1	100	93.204	Bos_taurus
ENSODEG00000014185	RC3H1	100	94.180	ENSCJAG00000009106	RC3H1	100	94.268	Callithrix_jacchus
ENSODEG00000014185	RC3H1	100	94.528	ENSCAFG00000014434	RC3H1	100	94.528	Canis_familiaris
ENSODEG00000014185	RC3H1	100	94.444	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSODEG00000014185	RC3H1	100	93.557	ENSCHIG00000002873	RC3H1	100	93.557	Capra_hircus
ENSODEG00000014185	RC3H1	99	93.380	ENSTSYG00000003913	RC3H1	99	93.380	Carlito_syrichta
ENSODEG00000014185	RC3H1	100	93.563	ENSCPOG00000004349	RC3H1	100	93.563	Cavia_porcellus
ENSODEG00000014185	RC3H1	100	92.240	ENSCCAG00000025652	RC3H1	98	94.359	Cebus_capucinus
ENSODEG00000014185	RC3H1	100	94.709	ENSCATG00000033497	RC3H1	100	94.709	Cercocebus_atys
ENSODEG00000014185	RC3H1	100	97.087	ENSCLAG00000011267	RC3H1	100	97.087	Chinchilla_lanigera
ENSODEG00000014185	RC3H1	96	95.032	ENSCSAG00000011823	RC3H1	85	95.032	Chlorocebus_sabaeus
ENSODEG00000014185	RC3H1	100	87.972	ENSCPBG00000014670	RC3H1	100	87.796	Chrysemys_picta_bellii
ENSODEG00000014185	RC3H1	100	94.626	ENSCANG00000032120	RC3H1	100	94.626	Colobus_angolensis_palliatus
ENSODEG00000014185	RC3H1	100	93.198	ENSCGRG00001020812	Rc3h1	100	93.198	Cricetulus_griseus_chok1gshd
ENSODEG00000014185	RC3H1	100	93.198	ENSCGRG00000011952	Rc3h1	100	93.198	Cricetulus_griseus_crigri
ENSODEG00000014185	RC3H1	55	92.295	ENSDNOG00000011494	RC3H1	99	92.295	Dasypus_novemcinctus
ENSODEG00000014185	RC3H1	100	93.645	ENSDORG00000004855	Rc3h1	100	93.557	Dipodomys_ordii
ENSODEG00000014185	RC3H1	82	95.455	ENSETEG00000012064	RC3H1	87	95.455	Echinops_telfairi
ENSODEG00000014185	RC3H1	100	93.292	ENSEASG00005017000	RC3H1	100	93.292	Equus_asinus_asinus
ENSODEG00000014185	RC3H1	100	93.116	ENSECAG00000021208	RC3H1	100	93.116	Equus_caballus
ENSODEG00000014185	RC3H1	83	95.378	ENSEEUG00000014861	RC3H1	93	82.560	Erinaceus_europaeus
ENSODEG00000014185	RC3H1	100	94.885	ENSFCAG00000014924	RC3H1	100	94.885	Felis_catus
ENSODEG00000014185	RC3H1	100	86.101	ENSFALG00000002947	RC3H1	100	86.101	Ficedula_albicollis
ENSODEG00000014185	RC3H1	100	96.734	ENSFDAG00000013303	RC3H1	100	96.734	Fukomys_damarensis
ENSODEG00000014185	RC3H1	100	85.965	ENSGALG00000004587	RC3H1	100	85.965	Gallus_gallus
ENSODEG00000014185	RC3H1	100	86.304	ENSGAGG00000018194	RC3H1	100	86.040	Gopherus_agassizii
ENSODEG00000014185	RC3H1	100	88.039	ENSGGOG00000005735	RC3H1	100	88.039	Gorilla_gorilla
ENSODEG00000014185	RC3H1	89	90.347	ENSHGLG00000004183	-	100	90.347	Heterocephalus_glaber_female
ENSODEG00000014185	RC3H1	100	96.293	ENSHGLG00100008577	RC3H1	100	96.293	Heterocephalus_glaber_male
ENSODEG00000014185	RC3H1	100	94.004	ENSSTOG00000016033	RC3H1	100	94.092	Ictidomys_tridecemlineatus
ENSODEG00000014185	RC3H1	100	93.027	ENSJJAG00000018915	Rc3h1	100	93.027	Jaculus_jaculus
ENSODEG00000014185	RC3H1	100	73.803	ENSLACG00000016186	RC3H1	100	77.568	Latimeria_chalumnae
ENSODEG00000014185	RC3H1	97	94.900	ENSLAFG00000004367	RC3H1	100	94.900	Loxodonta_africana
ENSODEG00000014185	RC3H1	100	94.621	ENSMFAG00000033725	RC3H1	100	94.621	Macaca_fascicularis
ENSODEG00000014185	RC3H1	100	94.709	ENSMMUG00000000630	RC3H1	100	94.709	Macaca_mulatta
ENSODEG00000014185	RC3H1	100	94.709	ENSMNEG00000035968	RC3H1	100	94.709	Macaca_nemestrina
ENSODEG00000014185	RC3H1	100	94.797	ENSMLEG00000037455	RC3H1	100	94.797	Mandrillus_leucophaeus
ENSODEG00000014185	RC3H1	97	93.952	ENSMAUG00000020864	Rc3h1	100	93.952	Mesocricetus_auratus
ENSODEG00000014185	RC3H1	100	94.969	ENSMICG00000003000	RC3H1	100	94.969	Microcebus_murinus
ENSODEG00000014185	RC3H1	93	92.045	ENSMOCG00000016587	Rc3h1	98	92.045	Microtus_ochrogaster
ENSODEG00000014185	RC3H1	100	90.925	ENSMODG00000004289	RC3H1	100	90.837	Monodelphis_domestica
ENSODEG00000014185	RC3H1	100	92.586	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.586	Mus_caroli
ENSODEG00000014185	RC3H1	100	92.233	ENSMUSG00000040423	Rc3h1	100	92.233	Mus_musculus
ENSODEG00000014185	RC3H1	100	92.233	MGP_PahariEiJ_G0027992	Rc3h1	100	92.233	Mus_pahari
ENSODEG00000014185	RC3H1	100	92.233	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.233	Mus_spretus
ENSODEG00000014185	RC3H1	100	94.268	ENSMPUG00000004747	RC3H1	100	94.268	Mustela_putorius_furo
ENSODEG00000014185	RC3H1	100	93.292	ENSMLUG00000011127	RC3H1	100	93.292	Myotis_lucifugus
ENSODEG00000014185	RC3H1	100	93.822	ENSNGAG00000011135	Rc3h1	100	93.822	Nannospalax_galili
ENSODEG00000014185	RC3H1	100	94.621	ENSNLEG00000015327	RC3H1	100	94.621	Nomascus_leucogenys
ENSODEG00000014185	RC3H1	99	81.858	ENSOPRG00000013068	RC3H1	99	81.416	Ochotona_princeps
ENSODEG00000014185	RC3H1	100	89.607	ENSOANG00000000924	RC3H1	100	89.607	Ornithorhynchus_anatinus
ENSODEG00000014185	RC3H1	99	93.733	ENSOCUG00000004930	RC3H1	98	93.733	Oryctolagus_cuniculus
ENSODEG00000014185	RC3H1	100	87.841	ENSOGAG00000004044	RC3H1	100	87.841	Otolemur_garnettii
ENSODEG00000014185	RC3H1	100	93.690	ENSOARG00000013011	RC3H1	100	93.690	Ovis_aries
ENSODEG00000014185	RC3H1	100	94.537	ENSPPAG00000039253	RC3H1	100	94.537	Pan_paniscus
ENSODEG00000014185	RC3H1	100	94.351	ENSPPRG00000009007	RC3H1	100	94.351	Panthera_pardus
ENSODEG00000014185	RC3H1	100	94.728	ENSPTIG00000015326	RC3H1	100	94.728	Panthera_tigris_altaica
ENSODEG00000014185	RC3H1	100	94.537	ENSPTRG00000001702	RC3H1	100	94.537	Pan_troglodytes
ENSODEG00000014185	RC3H1	100	94.621	ENSPANG00000008886	RC3H1	100	94.621	Papio_anubis
ENSODEG00000014185	RC3H1	100	87.281	ENSPSIG00000016181	RC3H1	100	87.544	Pelodiscus_sinensis
ENSODEG00000014185	RC3H1	100	92.403	ENSPEMG00000011966	Rc3h1	100	92.491	Peromyscus_maniculatus_bairdii
ENSODEG00000014185	RC3H1	70	93.300	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSODEG00000014185	RC3H1	100	91.358	ENSPPYG00000000490	RC3H1	98	93.876	Pongo_abelii
ENSODEG00000014185	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSODEG00000014185	RC3H1	83	93.803	ENSPCOG00000021795	RC3H1	96	93.803	Propithecus_coquereli
ENSODEG00000014185	RC3H1	100	86.143	ENSPVAG00000007593	RC3H1	100	86.143	Pteropus_vampyrus
ENSODEG00000014185	RC3H1	97	60.686	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSODEG00000014185	RC3H1	100	94.626	ENSRBIG00000037743	RC3H1	100	94.626	Rhinopithecus_bieti
ENSODEG00000014185	RC3H1	100	94.621	ENSRROG00000036546	RC3H1	100	94.621	Rhinopithecus_roxellana
ENSODEG00000014185	RC3H1	93	84.543	ENSSBOG00000010664	RC3H1	100	88.553	Saimiri_boliviensis_boliviensis
ENSODEG00000014185	RC3H1	100	89.789	ENSSHAG00000007589	RC3H1	100	89.701	Sarcophilus_harrisii
ENSODEG00000014185	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSODEG00000014185	RC3H1	100	82.982	ENSSPUG00000018472	RC3H1	100	83.158	Sphenodon_punctatus
ENSODEG00000014185	RC3H1	100	94.793	ENSSSCG00000015498	RC3H1	100	94.793	Sus_scrofa
ENSODEG00000014185	RC3H1	100	86.567	ENSTGUG00000004090	RC3H1	100	86.567	Taeniopygia_guttata
ENSODEG00000014185	RC3H1	89	95.918	ENSTBEG00000005015	RC3H1	89	95.918	Tupaia_belangeri
ENSODEG00000014185	RC3H1	100	94.190	ENSTTRG00000008572	RC3H1	100	94.190	Tursiops_truncatus
ENSODEG00000014185	RC3H1	100	93.469	ENSUAMG00000019525	RC3H1	100	93.469	Ursus_americanus
ENSODEG00000014185	RC3H1	100	94.004	ENSUMAG00000020087	RC3H1	100	94.004	Ursus_maritimus
ENSODEG00000014185	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSODEG00000014185	RC3H1	100	94.019	ENSVVUG00000014201	RC3H1	100	94.019	Vulpes_vulpes
ENSODEG00000014185	RC3H1	100	77.652	ENSXETG00000020030	rc3h1	100	77.459	Xenopus_tropicalis