EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000014338 (Gene tree)
Gene ID: 101592072
Gene Symbol: -
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 8578 bases
Position: chrJH651607.1:860407-868984
Accession: 101592072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019436	SYF2	PF08231.12	6.8e-47	1	1
ENSODEP00000019437	SYF2	PF08231.12	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019680	-	633	-	ENSODEP00000019436	210 (aa)	-	-
ENSODET00000019681	-	651	XM_004637725	ENSODEP00000019437	216 (aa)	-	-

Gene Model

Click here to download ENSODEG00000014338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000014338	-	99	85.957	ENSODEG00000017664	-	100	85.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014338	-	98	84.979	ENSG00000117614	SYF2	96	84.979	Homo_sapiens
ENSODEG00000014338	-	92	74.775	ENSAPOG00000001174	syf2	99	72.340	Acanthochromis_polyacanthus
ENSODEG00000014338	-	99	82.278	ENSAMEG00000010115	-	98	82.278	Ailuropoda_melanoleuca
ENSODEG00000014338	-	80	83.590	ENSAMEG00000010134	-	100	83.590	Ailuropoda_melanoleuca
ENSODEG00000014338	-	92	71.171	ENSACIG00000023688	syf2	89	71.171	Amphilophus_citrinellus
ENSODEG00000014338	-	84	73.171	ENSAOCG00000010912	syf2	68	70.642	Amphiprion_ocellaris
ENSODEG00000014338	-	98	70.082	ENSAOCG00000022046	syf2	98	73.593	Amphiprion_ocellaris
ENSODEG00000014338	-	98	70.082	ENSAPEG00000018858	syf2	94	70.082	Amphiprion_percula
ENSODEG00000014338	-	90	72.811	ENSATEG00000007745	syf2	99	69.787	Anabas_testudineus
ENSODEG00000014338	-	82	78.000	ENSAPLG00000016435	SYF2	99	78.000	Anas_platyrhynchos
ENSODEG00000014338	-	68	74.342	ENSACAG00000026777	-	92	74.342	Anolis_carolinensis
ENSODEG00000014338	-	84	75.490	ENSACAG00000013653	-	100	75.490	Anolis_carolinensis
ENSODEG00000014338	-	98	84.549	ENSANAG00000032473	SYF2	96	84.549	Aotus_nancymaae
ENSODEG00000014338	-	92	70.721	ENSACLG00000019916	syf2	99	68.511	Astatotilapia_calliptera
ENSODEG00000014338	-	100	69.672	ENSAMXG00000004051	syf2	100	69.672	Astyanax_mexicanus
ENSODEG00000014338	-	99	83.051	ENSBTAG00000001651	SYF2	100	83.051	Bos_taurus
ENSODEG00000014338	-	86	46.445	WBGene00019402	syf-2	99	43.966	Caenorhabditis_elegans
ENSODEG00000014338	-	98	84.979	ENSCJAG00000046570	SYF2	96	84.979	Callithrix_jacchus
ENSODEG00000014338	-	99	82.278	ENSCAFG00000012895	-	100	80.894	Canis_familiaris
ENSODEG00000014338	-	98	73.932	ENSCAFG00000030331	-	99	73.932	Canis_familiaris
ENSODEG00000014338	-	81	79.558	ENSCAFG00020021094	-	96	79.558	Canis_lupus_dingo
ENSODEG00000014338	-	99	82.278	ENSCAFG00020021091	-	100	80.894	Canis_lupus_dingo
ENSODEG00000014338	-	99	83.898	ENSCHIG00000020874	SYF2	100	82.041	Capra_hircus
ENSODEG00000014338	-	100	81.557	ENSTSYG00000005114	SYF2	100	81.557	Carlito_syrichta
ENSODEG00000014338	-	81	84.343	ENSCAPG00000010006	SYF2	100	84.343	Cavia_aperea
ENSODEG00000014338	-	100	84.016	ENSCPOG00000005326	SYF2	100	84.016	Cavia_porcellus
ENSODEG00000014338	-	98	84.979	ENSCCAG00000022459	SYF2	96	84.979	Cebus_capucinus
ENSODEG00000014338	-	98	84.549	ENSCATG00000026917	SYF2	96	84.549	Cercocebus_atys
ENSODEG00000014338	-	100	85.656	ENSCLAG00000008474	SYF2	100	85.656	Chinchilla_lanigera
ENSODEG00000014338	-	98	84.549	ENSCSAG00000000948	SYF2	96	84.549	Chlorocebus_sabaeus
ENSODEG00000014338	-	70	63.793	ENSCHOG00000005273	-	96	63.793	Choloepus_hoffmanni
ENSODEG00000014338	-	93	80.357	ENSCPBG00000025073	SYF2	96	76.891	Chrysemys_picta_bellii
ENSODEG00000014338	-	87	47.418	ENSCING00000003017	-	89	46.948	Ciona_intestinalis
ENSODEG00000014338	-	87	47.418	ENSCSAVG00000006627	-	97	47.418	Ciona_savignyi
ENSODEG00000014338	-	98	78.924	ENSCANG00000037322	SYF2	95	78.924	Colobus_angolensis_palliatus
ENSODEG00000014338	-	99	80.591	ENSCGRG00001020733	Syf2	100	79.508	Cricetulus_griseus_chok1gshd
ENSODEG00000014338	-	81	82.412	ENSCGRG00000005095	Syf2	96	82.412	Cricetulus_griseus_crigri
ENSODEG00000014338	-	90	69.266	ENSCSEG00000000117	syf2	99	65.823	Cynoglossus_semilaevis
ENSODEG00000014338	-	92	71.041	ENSCVAG00000019543	syf2	99	67.227	Cyprinodon_variegatus
ENSODEG00000014338	-	92	73.874	ENSDARG00000004706	syf2	93	73.874	Danio_rerio
ENSODEG00000014338	-	99	83.898	ENSDNOG00000047605	SYF2	100	82.857	Dasypus_novemcinctus
ENSODEG00000014338	-	100	80.738	ENSDORG00000001274	Syf2	100	80.738	Dipodomys_ordii
ENSODEG00000014338	-	95	53.043	FBgn0033556	CG12343	99	53.043	Drosophila_melanogaster
ENSODEG00000014338	-	92	69.683	ENSETEG00000015729	SYF2	100	68.696	Echinops_telfairi
ENSODEG00000014338	-	80	54.497	ENSEBUG00000015402	syf2	95	54.497	Eptatretus_burgeri
ENSODEG00000014338	-	100	74.486	ENSEASG00005004232	-	100	74.486	Equus_asinus_asinus
ENSODEG00000014338	-	99	83.830	ENSEASG00005004224	-	100	82.377	Equus_asinus_asinus
ENSODEG00000014338	-	99	83.898	ENSECAG00000012023	-	100	82.449	Equus_caballus
ENSODEG00000014338	-	99	83.544	ENSECAG00000010440	-	100	82.773	Equus_caballus
ENSODEG00000014338	-	72	64.481	ENSEEUG00000015084	SYF2	100	64.481	Erinaceus_europaeus
ENSODEG00000014338	-	96	72.650	ENSELUG00000003465	syf2	98	72.650	Esox_lucius
ENSODEG00000014338	-	99	83.544	ENSFCAG00000010324	-	82	83.544	Felis_catus
ENSODEG00000014338	-	99	82.700	ENSFCAG00000043095	-	100	81.301	Felis_catus
ENSODEG00000014338	-	84	75.000	ENSFALG00000000460	SYF2	93	71.795	Ficedula_albicollis
ENSODEG00000014338	-	99	85.957	ENSFDAG00000008310	SYF2	100	84.836	Fukomys_damarensis
ENSODEG00000014338	-	93	61.435	ENSFHEG00000007238	syf2	99	61.435	Fundulus_heteroclitus
ENSODEG00000014338	-	90	75.229	ENSGMOG00000019138	syf2	97	75.229	Gadus_morhua
ENSODEG00000014338	-	93	78.571	ENSGALG00000013639	SYF2	100	72.619	Gallus_gallus
ENSODEG00000014338	-	92	68.468	ENSGAFG00000019435	syf2	93	68.468	Gambusia_affinis
ENSODEG00000014338	-	89	73.488	ENSGACG00000007305	syf2	90	73.488	Gasterosteus_aculeatus
ENSODEG00000014338	-	93	80.357	ENSGAGG00000010670	SYF2	96	76.891	Gopherus_agassizii
ENSODEG00000014338	-	98	84.979	ENSGGOG00000012796	SYF2	96	84.979	Gorilla_gorilla
ENSODEG00000014338	-	98	68.803	ENSHBUG00000020477	syf2	99	68.803	Haplochromis_burtoni
ENSODEG00000014338	-	95	81.132	ENSHGLG00000004304	-	99	79.730	Heterocephalus_glaber_female
ENSODEG00000014338	-	99	85.532	ENSHGLG00000014393	SYF2	100	84.016	Heterocephalus_glaber_female
ENSODEG00000014338	-	99	85.532	ENSHGLG00100014722	SYF2	100	84.016	Heterocephalus_glaber_male
ENSODEG00000014338	-	100	68.443	ENSHCOG00000012904	syf2	78	68.443	Hippocampus_comes
ENSODEG00000014338	-	91	74.091	ENSIPUG00000019859	syf2	92	74.091	Ictalurus_punctatus
ENSODEG00000014338	-	56	78.767	ENSSTOG00000023984	SYF2	100	78.767	Ictidomys_tridecemlineatus
ENSODEG00000014338	-	81	84.422	ENSJJAG00000013301	Syf2	94	84.422	Jaculus_jaculus
ENSODEG00000014338	-	94	69.565	ENSKMAG00000013856	syf2	97	69.565	Kryptolebias_marmoratus
ENSODEG00000014338	-	91	73.059	ENSLBEG00000014425	syf2	98	70.815	Labrus_bergylta
ENSODEG00000014338	-	93	75.000	ENSLACG00000012064	SYF2	92	75.000	Latimeria_chalumnae
ENSODEG00000014338	-	99	71.610	ENSLOCG00000002728	syf2	94	70.954	Lepisosteus_oculatus
ENSODEG00000014338	-	74	56.522	ENSLAFG00000030814	-	100	56.522	Loxodonta_africana
ENSODEG00000014338	-	100	82.449	ENSLAFG00000023150	-	100	82.449	Loxodonta_africana
ENSODEG00000014338	-	98	84.979	ENSMFAG00000041831	SYF2	96	84.979	Macaca_fascicularis
ENSODEG00000014338	-	98	84.549	ENSMMUG00000002968	SYF2	96	84.549	Macaca_mulatta
ENSODEG00000014338	-	98	84.979	ENSMNEG00000030180	SYF2	96	84.979	Macaca_nemestrina
ENSODEG00000014338	-	98	84.549	ENSMLEG00000030248	SYF2	96	84.549	Mandrillus_leucophaeus
ENSODEG00000014338	-	90	71.889	ENSMAMG00000010403	syf2	97	68.354	Mastacembelus_armatus
ENSODEG00000014338	-	95	69.528	ENSMZEG00005006429	syf2	99	68.936	Maylandia_zebra
ENSODEG00000014338	-	81	78.392	ENSMGAG00000002019	SYF2	100	78.392	Meleagris_gallopavo
ENSODEG00000014338	-	99	80.591	ENSMAUG00000018974	Syf2	100	79.508	Mesocricetus_auratus
ENSODEG00000014338	-	91	79.208	ENSMICG00000016191	SYF2	100	84.422	Microcebus_murinus
ENSODEG00000014338	-	100	81.148	ENSMOCG00000022938	Syf2	100	81.148	Microtus_ochrogaster
ENSODEG00000014338	-	92	70.721	ENSMMOG00000002396	syf2	93	70.721	Mola_mola
ENSODEG00000014338	-	94	77.974	ENSMODG00000013951	-	99	77.974	Monodelphis_domestica
ENSODEG00000014338	-	100	67.755	ENSMALG00000010706	syf2	100	68.163	Monopterus_albus
ENSODEG00000014338	-	99	81.013	MGP_CAROLIEiJ_G0026633	Syf2	100	79.918	Mus_caroli
ENSODEG00000014338	-	99	81.013	ENSMUSG00000028821	Syf2	100	79.918	Mus_musculus
ENSODEG00000014338	-	99	81.013	MGP_PahariEiJ_G0028966	Syf2	100	79.918	Mus_pahari
ENSODEG00000014338	-	99	81.013	MGP_SPRETEiJ_G0027613	Syf2	100	79.918	Mus_spretus
ENSODEG00000014338	-	99	82.278	ENSMPUG00000015802	-	100	80.894	Mustela_putorius_furo
ENSODEG00000014338	-	99	81.857	ENSMPUG00000015801	-	100	79.675	Mustela_putorius_furo
ENSODEG00000014338	-	96	83.406	ENSMLUG00000001885	SYF2	94	83.406	Myotis_lucifugus
ENSODEG00000014338	-	99	83.122	ENSNGAG00000007912	Syf2	100	80.894	Nannospalax_galili
ENSODEG00000014338	-	97	64.159	ENSNBRG00000010720	syf2	99	64.159	Neolamprologus_brichardi
ENSODEG00000014338	-	98	84.979	ENSNLEG00000035185	SYF2	96	84.979	Nomascus_leucogenys
ENSODEG00000014338	-	99	82.979	ENSOPRG00000012870	SYF2	100	81.557	Ochotona_princeps
ENSODEG00000014338	-	92	70.721	ENSONIG00000008213	syf2	99	67.932	Oreochromis_niloticus
ENSODEG00000014338	-	83	80.198	ENSOANG00000009552	SYF2	100	80.198	Ornithorhynchus_anatinus
ENSODEG00000014338	-	99	85.106	ENSOCUG00000013050	SYF2	100	83.197	Oryctolagus_cuniculus
ENSODEG00000014338	-	96	69.565	ENSORLG00000028820	syf2	99	69.565	Oryzias_latipes
ENSODEG00000014338	-	92	71.171	ENSORLG00020018333	syf2	94	71.171	Oryzias_latipes_hni
ENSODEG00000014338	-	90	72.018	ENSORLG00015014665	syf2	92	72.018	Oryzias_latipes_hsok
ENSODEG00000014338	-	99	69.167	ENSOMEG00000013911	syf2	99	69.456	Oryzias_melastigma
ENSODEG00000014338	-	99	84.255	ENSOGAG00000009962	SYF2	100	83.197	Otolemur_garnettii
ENSODEG00000014338	-	99	82.773	ENSOARG00000006348	-	100	81.377	Ovis_aries
ENSODEG00000014338	-	80	59.585	ENSOARG00000006269	-	100	59.585	Ovis_aries
ENSODEG00000014338	-	98	84.979	ENSPPAG00000036579	SYF2	96	84.979	Pan_paniscus
ENSODEG00000014338	-	99	83.966	ENSPPRG00000001638	-	97	83.613	Panthera_pardus
ENSODEG00000014338	-	99	82.700	ENSPPRG00000001651	-	100	81.301	Panthera_pardus
ENSODEG00000014338	-	99	82.700	ENSPTIG00000007036	-	100	81.301	Panthera_tigris_altaica
ENSODEG00000014338	-	90	86.574	ENSPTIG00000005711	-	82	84.513	Panthera_tigris_altaica
ENSODEG00000014338	-	98	84.979	ENSPTRG00000000352	SYF2	96	84.979	Pan_troglodytes
ENSODEG00000014338	-	98	84.979	ENSPANG00000008139	SYF2	96	84.979	Papio_anubis
ENSODEG00000014338	-	96	71.983	ENSPKIG00000008130	syf2	99	71.983	Paramormyrops_kingsleyae
ENSODEG00000014338	-	99	76.596	ENSPSIG00000011816	SYF2	91	76.596	Pelodiscus_sinensis
ENSODEG00000014338	-	97	70.690	ENSPMGG00000008755	syf2	94	68.050	Periophthalmus_magnuspinnatus
ENSODEG00000014338	-	100	80.738	ENSPEMG00000008283	Syf2	100	80.738	Peromyscus_maniculatus_bairdii
ENSODEG00000014338	-	94	82.222	ENSPCIG00000014235	SYF2	92	81.659	Phascolarctos_cinereus
ENSODEG00000014338	-	98	67.521	ENSPFOG00000004116	syf2	95	67.521	Poecilia_formosa
ENSODEG00000014338	-	100	65.966	ENSPLAG00000006691	syf2	99	67.521	Poecilia_latipinna
ENSODEG00000014338	-	100	63.333	ENSPMEG00000011684	syf2	100	63.115	Poecilia_mexicana
ENSODEG00000014338	-	90	70.833	ENSPREG00000003009	syf2	100	66.393	Poecilia_reticulata
ENSODEG00000014338	-	98	84.979	ENSPPYG00000001713	SYF2	96	84.979	Pongo_abelii
ENSODEG00000014338	-	100	69.444	ENSPCOG00000027011	SYF2	100	69.444	Propithecus_coquereli
ENSODEG00000014338	-	100	73.061	ENSPVAG00000005841	SYF2	100	73.061	Pteropus_vampyrus
ENSODEG00000014338	-	92	70.721	ENSPNYG00000004979	syf2	99	68.511	Pundamilia_nyererei
ENSODEG00000014338	-	100	72.269	ENSPNAG00000015570	syf2	100	71.311	Pygocentrus_nattereri
ENSODEG00000014338	-	99	81.013	ENSRNOG00000060597	Syf2	100	79.918	Rattus_norvegicus
ENSODEG00000014338	-	98	82.403	ENSRBIG00000042970	SYF2	96	82.403	Rhinopithecus_bieti
ENSODEG00000014338	-	98	84.979	ENSRROG00000001347	SYF2	96	84.979	Rhinopithecus_roxellana
ENSODEG00000014338	-	98	84.120	ENSSBOG00000020184	SYF2	96	84.120	Saimiri_boliviensis_boliviensis
ENSODEG00000014338	-	84	81.068	ENSSHAG00000007152	-	100	81.068	Sarcophilus_harrisii
ENSODEG00000014338	-	100	75.904	ENSSHAG00000015630	-	100	75.904	Sarcophilus_harrisii
ENSODEG00000014338	-	99	70.763	ENSSFOG00015023647	syf2	99	70.763	Scleropages_formosus
ENSODEG00000014338	-	99	67.635	ENSSMAG00000009867	syf2	98	69.099	Scophthalmus_maximus
ENSODEG00000014338	-	90	73.394	ENSSDUG00000013072	syf2	99	68.465	Seriola_dumerili
ENSODEG00000014338	-	90	73.394	ENSSLDG00000012677	syf2	99	68.465	Seriola_lalandi_dorsalis
ENSODEG00000014338	-	100	67.347	ENSSARG00000012889	SYF2	100	67.347	Sorex_araneus
ENSODEG00000014338	-	96	77.293	ENSSPUG00000005251	SYF2	91	77.293	Sphenodon_punctatus
ENSODEG00000014338	-	98	70.042	ENSSPAG00000009626	syf2	99	70.042	Stegastes_partitus
ENSODEG00000014338	-	99	83.051	ENSSSCG00000037481	SYF2	100	82.041	Sus_scrofa
ENSODEG00000014338	-	99	68.936	ENSTRUG00000001499	syf2	96	66.667	Takifugu_rubripes
ENSODEG00000014338	-	93	69.955	ENSTNIG00000016912	syf2	100	69.955	Tetraodon_nigroviridis
ENSODEG00000014338	-	100	63.090	ENSTBEG00000017370	SYF2	99	63.090	Tupaia_belangeri
ENSODEG00000014338	-	99	84.034	ENSTTRG00000003550	SYF2	100	83.265	Tursiops_truncatus
ENSODEG00000014338	-	99	81.013	ENSUAMG00000002897	SYF2	100	79.675	Ursus_americanus
ENSODEG00000014338	-	99	81.435	ENSUMAG00000013108	SYF2	100	80.081	Ursus_maritimus
ENSODEG00000014338	-	99	82.773	ENSVPAG00000005705	SYF2	99	81.818	Vicugna_pacos
ENSODEG00000014338	-	84	84.390	ENSVVUG00000027181	-	96	80.591	Vulpes_vulpes
ENSODEG00000014338	-	99	82.278	ENSVVUG00000027175	-	100	80.894	Vulpes_vulpes
ENSODEG00000014338	-	99	73.305	ENSXETG00000022797	syf2	95	73.840	Xenopus_tropicalis
ENSODEG00000014338	-	89	70.698	ENSXMAG00000022698	syf2	100	65.984	Xiphophorus_maculatus