EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014443 (Gene tree)
Gene ID: 101583148
Gene Symbol: -
Alias: -
Full Name: putative ATP-dependent RNA helicase TDRD12
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 123955 bases
Position: chrJH651598.1:5540283-5664237
Accession: 101583148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019573	TUDOR	PF00567.24	2.2e-29	1	2
ENSODEP00000019573	TUDOR	PF00567.24	2.2e-29	2	2
ENSODEP00000019574	TUDOR	PF00567.24	5.1e-10	1	1
ENSODEP00000019573	DEAD	PF00270.29	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019819	-	1065	-	ENSODEP00000019574	354 (aa)	-	-
ENSODET00000019818	-	3513	XM_004636824	ENSODEP00000019573	1170 (aa)	-	-

Gene Model

Click here to download ENSODEG00000014443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014443	-	72	42.053	ENSAPOG00000006421	tdrd12	81	42.053	Acanthochromis_polyacanthus
ENSODEG00000014443	-	62	78.505	ENSAMEG00000015440	-	100	71.261	Ailuropoda_melanoleuca
ENSODEG00000014443	-	83	42.284	ENSACIG00000021652	tdrd12	91	42.284	Amphilophus_citrinellus
ENSODEG00000014443	-	78	45.109	ENSAOCG00000016463	tdrd12	76	45.109	Amphiprion_ocellaris
ENSODEG00000014443	-	78	44.865	ENSAPEG00000015105	tdrd12	78	44.865	Amphiprion_percula
ENSODEG00000014443	-	72	42.769	ENSATEG00000011608	tdrd12	88	42.769	Anabas_testudineus
ENSODEG00000014443	-	83	57.460	ENSAPLG00000011417	-	92	57.460	Anas_platyrhynchos
ENSODEG00000014443	-	68	43.703	ENSACAG00000029615	-	95	43.716	Anolis_carolinensis
ENSODEG00000014443	-	95	68.649	ENSANAG00000023166	-	99	70.051	Aotus_nancymaae
ENSODEG00000014443	-	68	48.611	ENSAMXG00000013811	tdrd12	80	48.611	Astyanax_mexicanus
ENSODEG00000014443	-	93	75.529	ENSBTAG00000019266	TDRD12	99	75.529	Bos_taurus
ENSODEG00000014443	-	95	68.378	ENSCJAG00000000763	-	99	70.305	Callithrix_jacchus
ENSODEG00000014443	-	99	75.907	ENSCAFG00000007505	TDRD12	99	72.414	Canis_familiaris
ENSODEG00000014443	-	97	75.907	ENSCAFG00020019790	-	90	75.907	Canis_lupus_dingo
ENSODEG00000014443	-	95	68.564	ENSTSYG00000012034	-	99	71.688	Carlito_syrichta
ENSODEG00000014443	-	99	86.325	ENSCPOG00000002876	-	99	86.119	Cavia_porcellus
ENSODEG00000014443	-	86	73.729	ENSCCAG00000037592	-	88	73.729	Cebus_capucinus
ENSODEG00000014443	-	86	68.608	ENSCATG00000038627	-	92	68.608	Cercocebus_atys
ENSODEG00000014443	-	100	86.580	ENSCLAG00000012138	-	94	86.580	Chinchilla_lanigera
ENSODEG00000014443	-	95	70.699	ENSCSAG00000004794	-	92	75.253	Chlorocebus_sabaeus
ENSODEG00000014443	-	69	88.462	ENSCHOG00000009768	-	53	88.462	Choloepus_hoffmanni
ENSODEG00000014443	-	86	66.557	ENSCPBG00000000147	-	90	66.557	Chrysemys_picta_bellii
ENSODEG00000014443	-	95	70.541	ENSCANG00000040785	-	99	71.320	Colobus_angolensis_palliatus
ENSODEG00000014443	-	99	75.783	ENSCGRG00001021407	-	98	77.000	Cricetulus_griseus_chok1gshd
ENSODEG00000014443	-	96	75.660	ENSCGRG00000007286	-	99	72.342	Cricetulus_griseus_crigri
ENSODEG00000014443	-	72	44.514	ENSCSEG00000001744	-	67	44.514	Cynoglossus_semilaevis
ENSODEG00000014443	-	61	39.525	ENSCVAG00000004277	tdrd12	92	39.525	Cyprinodon_variegatus
ENSODEG00000014443	-	93	45.806	ENSDARG00000075217	tdrd12	82	45.806	Danio_rerio
ENSODEG00000014443	-	99	76.778	ENSDNOG00000017244	-	93	76.778	Dasypus_novemcinctus
ENSODEG00000014443	-	98	71.141	ENSDORG00000012134	-	98	72.566	Dipodomys_ordii
ENSODEG00000014443	-	73	74.172	ENSETEG00000015088	-	71	74.689	Echinops_telfairi
ENSODEG00000014443	-	99	72.006	ENSEASG00005021053	-	99	69.918	Equus_asinus_asinus
ENSODEG00000014443	-	76	80.612	ENSEEUG00000008457	-	84	80.612	Erinaceus_europaeus
ENSODEG00000014443	-	92	49.398	ENSELUG00000017494	tdrd12	95	41.242	Esox_lucius
ENSODEG00000014443	-	99	45.633	ENSFALG00000000259	-	93	45.633	Ficedula_albicollis
ENSODEG00000014443	-	100	83.152	ENSFDAG00000014797	-	100	83.152	Fukomys_damarensis
ENSODEG00000014443	-	95	30.833	ENSFHEG00000002884	-	63	37.042	Fundulus_heteroclitus
ENSODEG00000014443	-	86	55.512	ENSGALG00000004704	-	95	55.512	Gallus_gallus
ENSODEG00000014443	-	89	42.326	ENSGAFG00000003729	tdrd12	76	42.326	Gambusia_affinis
ENSODEG00000014443	-	90	67.987	ENSGAGG00000000247	-	86	67.987	Gopherus_agassizii
ENSODEG00000014443	-	95	69.730	ENSGGOG00000011938	-	99	71.066	Gorilla_gorilla
ENSODEG00000014443	-	71	44.484	ENSHBUG00000020426	tdrd12	84	44.484	Haplochromis_burtoni
ENSODEG00000014443	-	100	87.006	ENSHGLG00000015608	-	100	87.006	Heterocephalus_glaber_female
ENSODEG00000014443	-	95	75.472	ENSHGLG00100008227	-	92	83.333	Heterocephalus_glaber_male
ENSODEG00000014443	-	95	38.048	ENSIPUG00000016825	tdrd12	90	37.817	Ictalurus_punctatus
ENSODEG00000014443	-	100	81.690	ENSSTOG00000013638	-	100	81.690	Ictidomys_tridecemlineatus
ENSODEG00000014443	-	54	43.726	ENSKMAG00000008031	tdrd12	73	43.726	Kryptolebias_marmoratus
ENSODEG00000014443	-	71	43.554	ENSLBEG00000005601	tdrd12	82	43.554	Labrus_bergylta
ENSODEG00000014443	-	95	40.000	ENSLACG00000010650	-	94	50.915	Latimeria_chalumnae
ENSODEG00000014443	-	93	47.198	ENSLOCG00000001690	tdrd12	84	47.198	Lepisosteus_oculatus
ENSODEG00000014443	-	95	71.774	ENSLAFG00000008698	-	92	78.593	Loxodonta_africana
ENSODEG00000014443	-	95	70.811	ENSMFAG00000044756	-	99	72.081	Macaca_fascicularis
ENSODEG00000014443	-	99	76.239	ENSMMUG00000015608	-	99	72.081	Macaca_mulatta
ENSODEG00000014443	-	95	70.811	ENSMNEG00000043067	-	99	72.021	Macaca_nemestrina
ENSODEG00000014443	-	95	71.081	ENSMLEG00000042036	-	99	72.280	Mandrillus_leucophaeus
ENSODEG00000014443	-	96	31.285	ENSMAMG00000013867	tdrd12	91	43.354	Mastacembelus_armatus
ENSODEG00000014443	-	75	41.796	ENSMZEG00005024214	tdrd12	87	42.675	Maylandia_zebra
ENSODEG00000014443	-	68	47.795	ENSMGAG00000005627	-	100	47.795	Meleagris_gallopavo
ENSODEG00000014443	-	100	72.697	ENSMAUG00000013767	-	100	72.697	Mesocricetus_auratus
ENSODEG00000014443	-	95	68.919	ENSMICG00000003623	-	99	74.365	Microcebus_murinus
ENSODEG00000014443	-	99	73.339	ENSMOCG00000002366	-	99	73.339	Microtus_ochrogaster
ENSODEG00000014443	-	81	46.369	ENSMMOG00000018662	tdrd12	82	45.098	Mola_mola
ENSODEG00000014443	-	93	68.085	ENSMODG00000012286	-	84	68.085	Monodelphis_domestica
ENSODEG00000014443	-	77	40.598	ENSMALG00000006918	tdrd12	84	40.598	Monopterus_albus
ENSODEG00000014443	-	100	73.239	MGP_CAROLIEiJ_G0029587	-	99	80.597	Mus_caroli
ENSODEG00000014443	-	99	75.214	MGP_PahariEiJ_G0012821	-	99	82.090	Mus_pahari
ENSODEG00000014443	-	100	73.803	MGP_SPRETEiJ_G0030686	-	99	80.597	Mus_spretus
ENSODEG00000014443	-	100	74.892	ENSMPUG00000007791	-	94	74.892	Mustela_putorius_furo
ENSODEG00000014443	-	95	71.274	ENSMLUG00000010694	-	99	75.937	Myotis_lucifugus
ENSODEG00000014443	-	100	74.930	ENSNGAG00000000793	-	99	74.930	Nannospalax_galili
ENSODEG00000014443	-	54	41.155	ENSNBRG00000017878	-	81	44.186	Neolamprologus_brichardi
ENSODEG00000014443	-	87	70.173	ENSNLEG00000007635	-	92	70.173	Nomascus_leucogenys
ENSODEG00000014443	-	52	83.333	ENSMEUG00000014059	-	52	81.013	Notamacropus_eugenii
ENSODEG00000014443	-	95	54.054	ENSOPRG00000015809	-	85	67.742	Ochotona_princeps
ENSODEG00000014443	-	83	45.183	ENSONIG00000010630	tdrd12	91	45.183	Oreochromis_niloticus
ENSODEG00000014443	-	95	56.196	ENSOANG00000029442	-	99	60.708	Ornithorhynchus_anatinus
ENSODEG00000014443	-	99	72.817	ENSOCUG00000016911	-	99	72.922	Oryctolagus_cuniculus
ENSODEG00000014443	-	78	38.328	ENSORLG00000027859	tdrd12	80	38.328	Oryzias_latipes
ENSODEG00000014443	-	84	43.137	ENSORLG00015020835	tdrd12	82	43.137	Oryzias_latipes_hsok
ENSODEG00000014443	-	77	41.830	ENSOMEG00000021862	tdrd12	87	41.830	Oryzias_melastigma
ENSODEG00000014443	-	95	69.730	ENSOGAG00000001571	-	92	78.638	Otolemur_garnettii
ENSODEG00000014443	-	99	79.487	ENSOARG00000004254	-	94	79.487	Ovis_aries
ENSODEG00000014443	-	95	65.405	ENSPPAG00000042284	-	99	70.558	Pan_paniscus
ENSODEG00000014443	-	95	65.946	ENSPPRG00000002389	-	100	71.899	Panthera_pardus
ENSODEG00000014443	-	87	70.435	ENSPTRG00000010795	TDRD12	91	70.435	Pan_troglodytes
ENSODEG00000014443	-	95	75.762	ENSPANG00000001203	-	99	72.081	Papio_anubis
ENSODEG00000014443	-	82	47.756	ENSPKIG00000006407	tdrd12	67	47.756	Paramormyrops_kingsleyae
ENSODEG00000014443	-	96	53.913	ENSPSIG00000012970	-	100	66.332	Pelodiscus_sinensis
ENSODEG00000014443	-	68	44.286	ENSPMGG00000022691	tdrd12	80	44.286	Periophthalmus_magnuspinnatus
ENSODEG00000014443	-	100	76.056	ENSPEMG00000009233	-	100	76.056	Peromyscus_maniculatus_bairdii
ENSODEG00000014443	-	98	66.319	ENSPCIG00000020993	-	94	66.319	Phascolarctos_cinereus
ENSODEG00000014443	-	86	43.721	ENSPFOG00000008184	tdrd12	72	43.721	Poecilia_formosa
ENSODEG00000014443	-	52	47.059	ENSPMEG00000006420	tdrd12	81	47.059	Poecilia_mexicana
ENSODEG00000014443	-	65	44.248	ENSPREG00000004916	tdrd12	69	44.248	Poecilia_reticulata
ENSODEG00000014443	-	95	70.270	ENSPPYG00000009821	-	91	75.648	Pongo_abelii
ENSODEG00000014443	-	95	59.459	ENSPCAG00000013510	-	78	71.429	Procavia_capensis
ENSODEG00000014443	-	95	62.703	ENSPCOG00000023600	-	99	69.543	Propithecus_coquereli
ENSODEG00000014443	-	79	87.629	ENSPVAG00000014599	-	83	87.629	Pteropus_vampyrus
ENSODEG00000014443	-	71	43.772	ENSPNYG00000022866	tdrd12	82	43.772	Pundamilia_nyererei
ENSODEG00000014443	-	68	45.862	ENSPNAG00000003413	tdrd12	76	45.862	Pygocentrus_nattereri
ENSODEG00000014443	-	100	76.623	ENSRNOG00000012719	Tdrd12	94	76.623	Rattus_norvegicus
ENSODEG00000014443	-	95	65.230	ENSRBIG00000019899	-	92	70.465	Rhinopithecus_bieti
ENSODEG00000014443	-	95	70.270	ENSRROG00000036351	-	99	70.812	Rhinopithecus_roxellana
ENSODEG00000014443	-	95	69.459	ENSSBOG00000034916	-	99	70.812	Saimiri_boliviensis_boliviensis
ENSODEG00000014443	-	96	60.743	ENSSHAG00000002599	-	91	66.770	Sarcophilus_harrisii
ENSODEG00000014443	-	67	46.862	ENSSFOG00015000297	tdrd12	73	46.862	Scleropages_formosus
ENSODEG00000014443	-	83	42.715	ENSSMAG00000002870	tdrd12	90	42.715	Scophthalmus_maximus
ENSODEG00000014443	-	69	46.689	ENSSDUG00000017304	tdrd12	79	46.689	Seriola_dumerili
ENSODEG00000014443	-	69	46.179	ENSSLDG00000004415	tdrd12	79	46.179	Seriola_lalandi_dorsalis
ENSODEG00000014443	-	95	69.022	ENSSARG00000005357	-	91	78.413	Sorex_araneus
ENSODEG00000014443	-	80	56.380	ENSSPUG00000013174	-	90	56.380	Sphenodon_punctatus
ENSODEG00000014443	-	63	60.870	ENSSPAG00000005706	tdrd12	77	60.870	Stegastes_partitus
ENSODEG00000014443	-	73	72.727	ENSSSCG00000002857	-	88	72.727	Sus_scrofa
ENSODEG00000014443	-	74	41.509	ENSTRUG00000021888	tdrd12	91	41.758	Takifugu_rubripes
ENSODEG00000014443	-	63	81.250	ENSTBEG00000007609	-	67	81.250	Tupaia_belangeri
ENSODEG00000014443	-	84	78.593	ENSTTRG00000012206	-	92	78.593	Tursiops_truncatus
ENSODEG00000014443	-	95	65.952	ENSUAMG00000007298	-	89	73.032	Ursus_americanus
ENSODEG00000014443	-	95	65.416	ENSUMAG00000014314	-	89	72.886	Ursus_maritimus
ENSODEG00000014443	-	95	59.892	ENSVPAG00000012051	-	85	77.157	Vicugna_pacos
ENSODEG00000014443	-	99	75.652	ENSVVUG00000016637	-	93	75.038	Vulpes_vulpes
ENSODEG00000014443	-	69	42.014	ENSXETG00000031945	-	100	41.582	Xenopus_tropicalis
ENSODEG00000014443	-	72	42.947	ENSXMAG00000020908	tdrd12	86	42.947	Xiphophorus_maculatus