EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000014531 (Gene tree)
Gene ID: 101564224
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 4036 bases
Position: chrJH651516.1:8134042-8138077
Accession: 101564224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019691	MMR_HSR1	PF01926.23	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000019938	SEPT1-201	1167	XM_004622969	ENSODEP00000019691	368 (aa)	XP_004623026	UPI000333A152

Gene Model

Click here to download ENSODEG00000014531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000014531	SEPT1	92	42.151	ENSODEG00000000877	SEPT11	81	40.833
ENSODEG00000014531	SEPT1	96	40.223	ENSODEG00000006542	-	83	40.223
ENSODEG00000014531	SEPT1	68	39.683	ENSODEG00000008812	SEPT10	63	39.683
ENSODEG00000014531	SEPT1	92	40.816	ENSODEG00000009083	SEPT8	85	38.378
ENSODEG00000014531	SEPT1	80	43.243	ENSODEG00000014211	SEPT14	69	43.243
ENSODEG00000014531	SEPT1	94	54.624	ENSODEG00000019855	-	94	54.396
ENSODEG00000014531	SEPT1	97	63.158	ENSODEG00000011244	SEPT4	99	63.462
ENSODEG00000014531	SEPT1	78	45.675	ENSODEG00000013145	SEPT12	79	45.675
ENSODEG00000014531	SEPT1	79	45.578	ENSODEG00000012406	SEPT3	83	45.578
ENSODEG00000014531	SEPT1	95	62.356	ENSODEG00000016498	-	94	63.889
ENSODEG00000014531	SEPT1	80	43.243	ENSODEG00000012340	SEPT9	87	43.243
ENSODEG00000014531	SEPT1	88	52.484	ENSODEG00000018677	-	97	52.537
ENSODEG00000014531	SEPT1	94	54.624	ENSODEG00000010316	-	97	52.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014531	SEPT1	100	92.663	ENSG00000180096	SEPT1	87	96.721	Homo_sapiens
ENSODEG00000014531	SEPT1	99	91.304	ENSAMEG00000007865	SEPT1	99	91.304	Ailuropoda_melanoleuca
ENSODEG00000014531	SEPT1	100	91.848	ENSANAG00000029084	SEPT1	100	91.848	Aotus_nancymaae
ENSODEG00000014531	SEPT1	100	92.935	ENSBTAG00000021219	SEPT1	100	92.935	Bos_taurus
ENSODEG00000014531	SEPT1	100	91.033	ENSCJAG00000002577	SEPT1	89	91.033	Callithrix_jacchus
ENSODEG00000014531	SEPT1	99	93.188	ENSCAFG00000016576	SEPT1	99	93.188	Canis_familiaris
ENSODEG00000014531	SEPT1	99	93.188	ENSCAFG00020017813	SEPT1	99	93.188	Canis_lupus_dingo
ENSODEG00000014531	SEPT1	100	90.160	ENSCHIG00000017447	SEPT1	100	90.160	Capra_hircus
ENSODEG00000014531	SEPT1	100	91.576	ENSTSYG00000035596	SEPT1	100	91.576	Carlito_syrichta
ENSODEG00000014531	SEPT1	100	76.359	ENSCAPG00000001347	SEPT1	100	76.359	Cavia_aperea
ENSODEG00000014531	SEPT1	99	95.368	ENSCPOG00000003088	SEPT1	99	95.368	Cavia_porcellus
ENSODEG00000014531	SEPT1	100	79.076	ENSCCAG00000030164	SEPT1	90	79.076	Cebus_capucinus
ENSODEG00000014531	SEPT1	100	92.935	ENSCATG00000037250	SEPT1	99	92.935	Cercocebus_atys
ENSODEG00000014531	SEPT1	99	96.185	ENSCLAG00000010486	SEPT1	100	95.882	Chinchilla_lanigera
ENSODEG00000014531	SEPT1	100	92.935	ENSCSAG00000006056	SEPT1	99	92.935	Chlorocebus_sabaeus
ENSODEG00000014531	SEPT1	100	93.207	ENSCANG00000035786	SEPT1	89	93.207	Colobus_angolensis_palliatus
ENSODEG00000014531	SEPT1	100	92.120	ENSCGRG00001003374	Sept1	100	92.120	Cricetulus_griseus_chok1gshd
ENSODEG00000014531	SEPT1	100	91.304	ENSCGRG00000004919	Sept1	100	91.304	Cricetulus_griseus_crigri
ENSODEG00000014531	SEPT1	100	92.391	ENSDNOG00000014680	SEPT1	85	92.391	Dasypus_novemcinctus
ENSODEG00000014531	SEPT1	100	92.391	ENSDORG00000011443	Sept1	100	92.391	Dipodomys_ordii
ENSODEG00000014531	SEPT1	92	92.647	ENSEASG00005013153	SEPT1	100	92.647	Equus_asinus_asinus
ENSODEG00000014531	SEPT1	100	92.663	ENSECAG00000009390	SEPT1	96	92.663	Equus_caballus
ENSODEG00000014531	SEPT1	100	91.576	ENSEEUG00000007661	SEPT1	100	91.576	Erinaceus_europaeus
ENSODEG00000014531	SEPT1	100	92.663	ENSFCAG00000013541	SEPT1	94	92.663	Felis_catus
ENSODEG00000014531	SEPT1	100	72.000	ENSGGOG00000017024	SEPT1	88	72.000	Gorilla_gorilla
ENSODEG00000014531	SEPT1	100	94.022	ENSSTOG00000002782	SEPT1	100	94.118	Ictidomys_tridecemlineatus
ENSODEG00000014531	SEPT1	100	91.848	ENSJJAG00000023131	Sept1	100	91.848	Jaculus_jaculus
ENSODEG00000014531	SEPT1	99	93.188	ENSLAFG00000027789	SEPT1	99	93.188	Loxodonta_africana
ENSODEG00000014531	SEPT1	100	92.935	ENSMFAG00000031504	SEPT1	89	92.935	Macaca_fascicularis
ENSODEG00000014531	SEPT1	100	87.228	ENSMMUG00000021842	SEPT1	97	92.941	Macaca_mulatta
ENSODEG00000014531	SEPT1	100	82.656	ENSMNEG00000041695	SEPT1	89	82.656	Macaca_nemestrina
ENSODEG00000014531	SEPT1	100	84.511	ENSMLEG00000039481	SEPT1	88	84.511	Mandrillus_leucophaeus
ENSODEG00000014531	SEPT1	100	92.935	ENSMAUG00000009531	Sept1	100	92.935	Mesocricetus_auratus
ENSODEG00000014531	SEPT1	99	93.733	ENSMICG00000011817	SEPT1	94	93.733	Microcebus_murinus
ENSODEG00000014531	SEPT1	100	92.391	ENSMOCG00000017518	Sept1	100	92.391	Microtus_ochrogaster
ENSODEG00000014531	SEPT1	100	91.848	MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	Mus_caroli
ENSODEG00000014531	SEPT1	100	92.391	ENSMUSG00000000486	Sept1	100	94.483	Mus_musculus
ENSODEG00000014531	SEPT1	100	92.391	MGP_PahariEiJ_G0013702	Sept1	100	95.172	Mus_pahari
ENSODEG00000014531	SEPT1	100	92.120	MGP_SPRETEiJ_G0031606	Sept1	100	93.793	Mus_spretus
ENSODEG00000014531	SEPT1	99	92.371	ENSMLUG00000006749	SEPT1	99	92.371	Myotis_lucifugus
ENSODEG00000014531	SEPT1	100	92.663	ENSNGAG00000021368	Sept1	100	92.663	Nannospalax_galili
ENSODEG00000014531	SEPT1	99	87.193	ENSMEUG00000000492	SEPT1	100	87.193	Notamacropus_eugenii
ENSODEG00000014531	SEPT1	100	91.576	ENSOPRG00000007981	SEPT1	100	91.576	Ochotona_princeps
ENSODEG00000014531	SEPT1	100	85.326	ENSOANG00000005331	SEPT1	100	85.326	Ornithorhynchus_anatinus
ENSODEG00000014531	SEPT1	99	94.550	ENSOGAG00000013350	SEPT1	99	94.550	Otolemur_garnettii
ENSODEG00000014531	SEPT1	99	92.141	ENSOARG00000006135	SEPT1	99	92.141	Ovis_aries
ENSODEG00000014531	SEPT1	100	74.185	ENSPPAG00000032680	SEPT1	87	74.185	Pan_paniscus
ENSODEG00000014531	SEPT1	99	92.643	ENSPPRG00000008648	-	100	92.643	Panthera_pardus
ENSODEG00000014531	SEPT1	84	92.557	ENSPTIG00000006718	SEPT1	87	92.557	Panthera_tigris_altaica
ENSODEG00000014531	SEPT1	100	92.663	ENSPTRG00000007998	SEPT1	89	92.663	Pan_troglodytes
ENSODEG00000014531	SEPT1	100	84.511	ENSPANG00000032364	SEPT1	99	84.511	Papio_anubis
ENSODEG00000014531	SEPT1	100	92.663	ENSPEMG00000023616	Sept1	100	92.663	Peromyscus_maniculatus_bairdii
ENSODEG00000014531	SEPT1	100	87.500	ENSPCIG00000001537	SEPT1	100	87.500	Phascolarctos_cinereus
ENSODEG00000014531	SEPT1	84	92.557	ENSPPYG00000007270	-	100	92.557	Pongo_abelii
ENSODEG00000014531	SEPT1	100	91.304	ENSPCAG00000009042	SEPT1	100	91.304	Procavia_capensis
ENSODEG00000014531	SEPT1	100	93.750	ENSPCOG00000028121	SEPT1	90	93.750	Propithecus_coquereli
ENSODEG00000014531	SEPT1	100	94.293	ENSPVAG00000008655	SEPT1	100	94.293	Pteropus_vampyrus
ENSODEG00000014531	SEPT1	100	92.120	ENSRNOG00000017804	Sept1	100	92.120	Rattus_norvegicus
ENSODEG00000014531	SEPT1	100	92.935	ENSRBIG00000036580	SEPT1	89	92.935	Rhinopithecus_bieti
ENSODEG00000014531	SEPT1	100	92.935	ENSRROG00000038708	SEPT1	99	92.935	Rhinopithecus_roxellana
ENSODEG00000014531	SEPT1	100	91.304	ENSSBOG00000021733	SEPT1	89	91.304	Saimiri_boliviensis_boliviensis
ENSODEG00000014531	SEPT1	99	86.921	ENSSHAG00000006478	SEPT1	99	86.921	Sarcophilus_harrisii
ENSODEG00000014531	SEPT1	95	93.429	ENSSSCG00000007800	SEPT1	100	92.663	Sus_scrofa
ENSODEG00000014531	SEPT1	100	93.207	ENSTTRG00000017272	SEPT1	100	93.207	Tursiops_truncatus
ENSODEG00000014531	SEPT1	100	93.478	ENSUAMG00000027438	SEPT1	99	93.207	Ursus_americanus
ENSODEG00000014531	SEPT1	100	93.478	ENSUMAG00000011345	SEPT1	100	93.478	Ursus_maritimus
ENSODEG00000014531	SEPT1	92	92.878	ENSVVUG00000026116	SEPT1	90	92.878	Vulpes_vulpes