EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014604 (Gene tree)
Gene ID: 101571143
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 24985 bases
Position: chrJH651675.1:6139639-6164623
Accession: 101571143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019777	zf-C3HC	PF07967.13	1.6e-38	1	1
ENSODEP00000019776	zf-C3HC	PF07967.13	2.1e-37	1	1
ENSODEP00000019776	Rsm1	PF08600.10	1.1e-15	1	1
ENSODEP00000019777	Rsm1	PF08600.10	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000020025	ZC3HC1-201	1503	XM_004642751	ENSODEP00000019776	500 (aa)	XP_004642808	UPI000333D57F
ENSODET00000020026	ZC3HC1-202	1290	-	ENSODEP00000019777	429 (aa)	-	-

Gene Model

Click here to download ENSODEG00000014604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014604	ZC3HC1	99	84.631	ENSG00000091732	ZC3HC1	99	84.830	Homo_sapiens
ENSODEG00000014604	ZC3HC1	94	46.224	ENSAPOG00000009078	zc3hc1	95	42.285	Acanthochromis_polyacanthus
ENSODEG00000014604	ZC3HC1	100	84.722	ENSAMEG00000005425	ZC3HC1	100	84.921	Ailuropoda_melanoleuca
ENSODEG00000014604	ZC3HC1	93	44.512	ENSACIG00000019513	zc3hc1	95	40.400	Amphilophus_citrinellus
ENSODEG00000014604	ZC3HC1	94	47.130	ENSAOCG00000024310	zc3hc1	95	43.287	Amphiprion_ocellaris
ENSODEG00000014604	ZC3HC1	94	47.130	ENSAPEG00000004907	zc3hc1	95	43.287	Amphiprion_percula
ENSODEG00000014604	ZC3HC1	79	50.519	ENSATEG00000016898	zc3hc1	86	46.065	Anabas_testudineus
ENSODEG00000014604	ZC3HC1	88	61.174	ENSAPLG00000003832	ZC3HC1	99	61.400	Anas_platyrhynchos
ENSODEG00000014604	ZC3HC1	100	60.311	ENSACAG00000001638	ZC3HC1	100	60.311	Anolis_carolinensis
ENSODEG00000014604	ZC3HC1	100	84.223	ENSANAG00000022213	ZC3HC1	100	84.223	Aotus_nancymaae
ENSODEG00000014604	ZC3HC1	83	48.070	ENSACLG00000025033	zc3hc1	94	43.046	Astatotilapia_calliptera
ENSODEG00000014604	ZC3HC1	94	42.623	ENSAMXG00000036792	zc3hc1	97	43.575	Astyanax_mexicanus
ENSODEG00000014604	ZC3HC1	100	85.294	ENSBTAG00000011247	ZC3HC1	100	83.665	Bos_taurus
ENSODEG00000014604	ZC3HC1	100	84.462	ENSCJAG00000010536	ZC3HC1	100	84.661	Callithrix_jacchus
ENSODEG00000014604	ZC3HC1	100	84.680	ENSCAFG00000001499	-	99	84.554	Canis_familiaris
ENSODEG00000014604	ZC3HC1	100	84.551	ENSCAFG00000029401	-	99	84.263	Canis_familiaris
ENSODEG00000014604	ZC3HC1	100	85.112	ENSCAFG00000031850	-	100	84.661	Canis_familiaris
ENSODEG00000014604	ZC3HC1	100	84.551	ENSCAFG00000028735	-	100	84.263	Canis_familiaris
ENSODEG00000014604	ZC3HC1	100	84.831	ENSCAFG00020006829	-	100	84.462	Canis_lupus_dingo
ENSODEG00000014604	ZC3HC1	100	83.333	ENSCAFG00020023333	-	100	83.532	Canis_lupus_dingo
ENSODEG00000014604	ZC3HC1	100	76.295	ENSCHIG00000014103	ZC3HC1	100	76.494	Capra_hircus
ENSODEG00000014604	ZC3HC1	100	83.466	ENSTSYG00000002843	ZC3HC1	100	83.665	Carlito_syrichta
ENSODEG00000014604	ZC3HC1	89	70.796	ENSCAPG00000016300	ZC3HC1	94	86.420	Cavia_aperea
ENSODEG00000014604	ZC3HC1	100	90.400	ENSCPOG00000014034	ZC3HC1	100	90.400	Cavia_porcellus
ENSODEG00000014604	ZC3HC1	100	66.733	ENSCCAG00000020384	ZC3HC1	100	81.498	Cebus_capucinus
ENSODEG00000014604	ZC3HC1	100	84.687	ENSCATG00000023130	ZC3HC1	100	84.861	Cercocebus_atys
ENSODEG00000014604	ZC3HC1	100	67.200	ENSCLAG00000008260	ZC3HC1	100	65.800	Chinchilla_lanigera
ENSODEG00000014604	ZC3HC1	73	83.607	ENSCSAG00000009881	ZC3HC1	97	83.880	Chlorocebus_sabaeus
ENSODEG00000014604	ZC3HC1	90	81.818	ENSCHOG00000011846	ZC3HC1	99	82.040	Choloepus_hoffmanni
ENSODEG00000014604	ZC3HC1	96	64.948	ENSCPBG00000017519	ZC3HC1	100	64.215	Chrysemys_picta_bellii
ENSODEG00000014604	ZC3HC1	100	84.462	ENSCANG00000029091	ZC3HC1	100	84.661	Colobus_angolensis_palliatus
ENSODEG00000014604	ZC3HC1	100	82.869	ENSCGRG00001018805	Zc3hc1	100	82.869	Cricetulus_griseus_chok1gshd
ENSODEG00000014604	ZC3HC1	100	81.673	ENSCGRG00000017114	Zc3hc1	100	81.673	Cricetulus_griseus_crigri
ENSODEG00000014604	ZC3HC1	96	43.738	ENSCSEG00000009284	zc3hc1	94	43.340	Cynoglossus_semilaevis
ENSODEG00000014604	ZC3HC1	93	43.653	ENSCVAG00000011566	zc3hc1	94	40.041	Cyprinodon_variegatus
ENSODEG00000014604	ZC3HC1	94	47.706	ENSDARG00000062651	zc3hc1	95	46.061	Danio_rerio
ENSODEG00000014604	ZC3HC1	100	80.677	ENSDNOG00000045016	ZC3HC1	100	80.876	Dasypus_novemcinctus
ENSODEG00000014604	ZC3HC1	100	73.307	ENSDORG00000008697	Zc3hc1	100	73.506	Dipodomys_ordii
ENSODEG00000014604	ZC3HC1	89	84.314	ENSEASG00005008789	ZC3HC1	97	83.407	Equus_asinus_asinus
ENSODEG00000014604	ZC3HC1	100	84.594	ENSECAG00000017886	ZC3HC1	100	84.095	Equus_caballus
ENSODEG00000014604	ZC3HC1	84	73.457	ENSEEUG00000003123	ZC3HC1	84	74.074	Erinaceus_europaeus
ENSODEG00000014604	ZC3HC1	89	49.430	ENSELUG00000023168	zc3hc1	94	44.064	Esox_lucius
ENSODEG00000014604	ZC3HC1	100	85.955	ENSFCAG00000010429	ZC3HC1	100	85.458	Felis_catus
ENSODEG00000014604	ZC3HC1	88	59.933	ENSFALG00000005006	ZC3HC1	100	57.906	Ficedula_albicollis
ENSODEG00000014604	ZC3HC1	100	88.372	ENSFDAG00000019897	ZC3HC1	100	88.372	Fukomys_damarensis
ENSODEG00000014604	ZC3HC1	95	45.783	ENSFHEG00000020149	zc3hc1	96	41.517	Fundulus_heteroclitus
ENSODEG00000014604	ZC3HC1	94	42.149	ENSGMOG00000002914	zc3hc1	95	41.458	Gadus_morhua
ENSODEG00000014604	ZC3HC1	99	61.449	ENSGALG00000008003	ZC3HC1	99	61.876	Gallus_gallus
ENSODEG00000014604	ZC3HC1	95	43.675	ENSGAFG00000016095	zc3hc1	96	40.519	Gambusia_affinis
ENSODEG00000014604	ZC3HC1	93	45.511	ENSGACG00000019706	zc3hc1	94	42.828	Gasterosteus_aculeatus
ENSODEG00000014604	ZC3HC1	78	64.962	ENSGAGG00000016106	ZC3HC1	100	65.217	Gopherus_agassizii
ENSODEG00000014604	ZC3HC1	99	84.431	ENSGGOG00000015504	ZC3HC1	99	84.631	Gorilla_gorilla
ENSODEG00000014604	ZC3HC1	93	44.753	ENSHBUG00000008347	zc3hc1	94	41.260	Haplochromis_burtoni
ENSODEG00000014604	ZC3HC1	100	88.837	ENSHGLG00000005085	ZC3HC1	100	88.837	Heterocephalus_glaber_female
ENSODEG00000014604	ZC3HC1	100	88.605	ENSHGLG00100011395	ZC3HC1	100	88.605	Heterocephalus_glaber_male
ENSODEG00000014604	ZC3HC1	95	41.068	ENSHCOG00000014309	zc3hc1	95	41.837	Hippocampus_comes
ENSODEG00000014604	ZC3HC1	100	83.865	ENSSTOG00000023599	-	100	84.064	Ictidomys_tridecemlineatus
ENSODEG00000014604	ZC3HC1	91	46.541	ENSKMAG00000015315	zc3hc1	88	42.339	Kryptolebias_marmoratus
ENSODEG00000014604	ZC3HC1	95	43.888	ENSLBEG00000017325	zc3hc1	95	43.513	Labrus_bergylta
ENSODEG00000014604	ZC3HC1	86	50.524	ENSLACG00000013032	ZC3HC1	97	52.758	Latimeria_chalumnae
ENSODEG00000014604	ZC3HC1	99	54.118	ENSLOCG00000015963	zc3hc1	99	52.071	Lepisosteus_oculatus
ENSODEG00000014604	ZC3HC1	100	82.016	ENSLAFG00000001292	ZC3HC1	100	82.213	Loxodonta_africana
ENSODEG00000014604	ZC3HC1	100	85.060	ENSMFAG00000030176	ZC3HC1	100	85.259	Macaca_fascicularis
ENSODEG00000014604	ZC3HC1	100	85.151	ENSMMUG00000006155	ZC3HC1	100	85.151	Macaca_mulatta
ENSODEG00000014604	ZC3HC1	100	85.060	ENSMNEG00000011833	ZC3HC1	100	85.259	Macaca_nemestrina
ENSODEG00000014604	ZC3HC1	100	84.919	ENSMLEG00000027328	ZC3HC1	100	85.060	Mandrillus_leucophaeus
ENSODEG00000014604	ZC3HC1	95	45.833	ENSMAMG00000010691	zc3hc1	96	42.688	Mastacembelus_armatus
ENSODEG00000014604	ZC3HC1	93	44.444	ENSMZEG00005007142	zc3hc1	94	41.057	Maylandia_zebra
ENSODEG00000014604	ZC3HC1	99	61.850	ENSMGAG00000002977	ZC3HC1	99	62.130	Meleagris_gallopavo
ENSODEG00000014604	ZC3HC1	82	75.663	ENSMAUG00000017032	Zc3hc1	92	75.663	Mesocricetus_auratus
ENSODEG00000014604	ZC3HC1	100	84.687	ENSMICG00000009167	ZC3HC1	100	84.687	Microcebus_murinus
ENSODEG00000014604	ZC3HC1	100	82.271	ENSMOCG00000015239	Zc3hc1	100	82.271	Microtus_ochrogaster
ENSODEG00000014604	ZC3HC1	87	42.544	ENSMMOG00000002204	zc3hc1	99	41.921	Mola_mola
ENSODEG00000014604	ZC3HC1	100	60.385	ENSMODG00000014630	ZC3HC1	100	60.577	Monodelphis_domestica
ENSODEG00000014604	ZC3HC1	94	45.429	ENSMALG00000014447	zc3hc1	96	42.315	Monopterus_albus
ENSODEG00000014604	ZC3HC1	100	79.814	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	80.279	Mus_caroli
ENSODEG00000014604	ZC3HC1	100	80.278	ENSMUSG00000039130	Zc3hc1	100	80.478	Mus_musculus
ENSODEG00000014604	ZC3HC1	100	74.118	MGP_PahariEiJ_G0021941	Zc3hc1	100	74.502	Mus_pahari
ENSODEG00000014604	ZC3HC1	100	80.278	MGP_SPRETEiJ_G0029183	Zc3hc1	100	80.279	Mus_spretus
ENSODEG00000014604	ZC3HC1	94	85.393	ENSMPUG00000005297	ZC3HC1	95	84.310	Mustela_putorius_furo
ENSODEG00000014604	ZC3HC1	100	82.173	ENSMLUG00000000063	-	100	82.178	Myotis_lucifugus
ENSODEG00000014604	ZC3HC1	67	74.780	ENSMLUG00000029228	-	99	75.073	Myotis_lucifugus
ENSODEG00000014604	ZC3HC1	100	80.716	ENSNGAG00000019014	Zc3hc1	100	80.716	Nannospalax_galili
ENSODEG00000014604	ZC3HC1	93	44.753	ENSNBRG00000004577	zc3hc1	94	40.937	Neolamprologus_brichardi
ENSODEG00000014604	ZC3HC1	99	83.488	ENSNLEG00000012698	ZC3HC1	99	83.633	Nomascus_leucogenys
ENSODEG00000014604	ZC3HC1	100	73.315	ENSMEUG00000011023	ZC3HC1	100	72.709	Notamacropus_eugenii
ENSODEG00000014604	ZC3HC1	75	82.558	ENSOPRG00000007867	-	68	82.558	Ochotona_princeps
ENSODEG00000014604	ZC3HC1	93	45.370	ENSONIG00000011644	zc3hc1	94	41.667	Oreochromis_niloticus
ENSODEG00000014604	ZC3HC1	90	64.009	ENSOANG00000011460	ZC3HC1	100	64.655	Ornithorhynchus_anatinus
ENSODEG00000014604	ZC3HC1	99	83.965	ENSOCUG00000017137	ZC3HC1	100	81.188	Oryctolagus_cuniculus
ENSODEG00000014604	ZC3HC1	96	42.683	ENSORLG00000014409	zc3hc1	95	41.700	Oryzias_latipes
ENSODEG00000014604	ZC3HC1	96	42.857	ENSORLG00020015874	zc3hc1	95	41.884	Oryzias_latipes_hni
ENSODEG00000014604	ZC3HC1	96	42.455	ENSORLG00015014641	zc3hc1	95	41.683	Oryzias_latipes_hsok
ENSODEG00000014604	ZC3HC1	95	48.137	ENSOMEG00000020604	zc3hc1	96	43.522	Oryzias_melastigma
ENSODEG00000014604	ZC3HC1	95	47.516	ENSOMEG00000000215	zc3hc1	96	43.522	Oryzias_melastigma
ENSODEG00000014604	ZC3HC1	100	77.888	ENSOGAG00000026193	ZC3HC1	100	78.088	Otolemur_garnettii
ENSODEG00000014604	ZC3HC1	100	86.006	ENSOARG00000004907	ZC3HC1	99	83.366	Ovis_aries
ENSODEG00000014604	ZC3HC1	99	84.631	ENSPPAG00000043172	ZC3HC1	99	84.830	Pan_paniscus
ENSODEG00000014604	ZC3HC1	100	85.393	ENSPPRG00000001004	ZC3HC1	100	84.919	Panthera_pardus
ENSODEG00000014604	ZC3HC1	100	85.955	ENSPTIG00000007823	ZC3HC1	100	85.657	Panthera_tigris_altaica
ENSODEG00000014604	ZC3HC1	99	84.631	ENSPTRG00000019685	ZC3HC1	99	84.830	Pan_troglodytes
ENSODEG00000014604	ZC3HC1	100	84.687	ENSPANG00000014229	ZC3HC1	100	84.687	Papio_anubis
ENSODEG00000014604	ZC3HC1	94	48.903	ENSPKIG00000007172	zc3hc1	95	46.791	Paramormyrops_kingsleyae
ENSODEG00000014604	ZC3HC1	92	66.779	ENSPSIG00000016646	ZC3HC1	100	58.824	Pelodiscus_sinensis
ENSODEG00000014604	ZC3HC1	95	42.155	ENSPMGG00000003548	zc3hc1	96	42.389	Periophthalmus_magnuspinnatus
ENSODEG00000014604	ZC3HC1	100	81.076	ENSPEMG00000000514	Zc3hc1	100	81.076	Peromyscus_maniculatus_bairdii
ENSODEG00000014604	ZC3HC1	97	70.760	ENSPCIG00000020619	ZC3HC1	100	72.494	Phascolarctos_cinereus
ENSODEG00000014604	ZC3HC1	95	44.179	ENSPFOG00000003466	zc3hc1	96	40.873	Poecilia_formosa
ENSODEG00000014604	ZC3HC1	95	43.373	ENSPLAG00000022211	zc3hc1	96	40.319	Poecilia_latipinna
ENSODEG00000014604	ZC3HC1	95	43.675	ENSPMEG00000001458	zc3hc1	96	40.519	Poecilia_mexicana
ENSODEG00000014604	ZC3HC1	95	43.675	ENSPREG00000004004	zc3hc1	96	40.719	Poecilia_reticulata
ENSODEG00000014604	ZC3HC1	99	76.143	ENSPPYG00000017998	ZC3HC1	99	76.342	Pongo_abelii
ENSODEG00000014604	ZC3HC1	92	80.000	ENSPCAG00000001182	ZC3HC1	100	80.217	Procavia_capensis
ENSODEG00000014604	ZC3HC1	100	85.458	ENSPCOG00000017354	ZC3HC1	100	85.657	Propithecus_coquereli
ENSODEG00000014604	ZC3HC1	100	79.681	ENSPVAG00000003195	ZC3HC1	100	79.880	Pteropus_vampyrus
ENSODEG00000014604	ZC3HC1	93	44.444	ENSPNYG00000020692	zc3hc1	94	41.057	Pundamilia_nyererei
ENSODEG00000014604	ZC3HC1	92	45.272	ENSPNAG00000020746	zc3hc1	95	44.986	Pygocentrus_nattereri
ENSODEG00000014604	ZC3HC1	100	79.324	ENSRNOG00000010154	Zc3hc1	100	79.920	Rattus_norvegicus
ENSODEG00000014604	ZC3HC1	90	84.327	ENSRBIG00000029409	ZC3HC1	100	84.547	Rhinopithecus_bieti
ENSODEG00000014604	ZC3HC1	100	84.462	ENSRROG00000041831	ZC3HC1	100	84.661	Rhinopithecus_roxellana
ENSODEG00000014604	ZC3HC1	100	69.323	ENSSBOG00000032787	ZC3HC1	96	83.000	Saimiri_boliviensis_boliviensis
ENSODEG00000014604	ZC3HC1	92	73.118	ENSSHAG00000002529	ZC3HC1	100	73.548	Sarcophilus_harrisii
ENSODEG00000014604	ZC3HC1	95	47.835	ENSSFOG00015003667	zc3hc1	91	47.035	Scleropages_formosus
ENSODEG00000014604	ZC3HC1	96	43.487	ENSSMAG00000000647	zc3hc1	86	43.713	Scophthalmus_maximus
ENSODEG00000014604	ZC3HC1	96	43.400	ENSSDUG00000004241	zc3hc1	94	42.430	Seriola_dumerili
ENSODEG00000014604	ZC3HC1	96	43.287	ENSSLDG00000025056	zc3hc1	94	42.315	Seriola_lalandi_dorsalis
ENSODEG00000014604	ZC3HC1	99	74.651	ENSSARG00000012013	ZC3HC1	99	74.850	Sorex_araneus
ENSODEG00000014604	ZC3HC1	85	57.737	ENSSPUG00000000778	ZC3HC1	85	57.968	Sphenodon_punctatus
ENSODEG00000014604	ZC3HC1	94	46.364	ENSSPAG00000020041	zc3hc1	95	43.173	Stegastes_partitus
ENSODEG00000014604	ZC3HC1	100	84.661	ENSSSCG00000016565	ZC3HC1	100	84.661	Sus_scrofa
ENSODEG00000014604	ZC3HC1	94	43.396	ENSTRUG00000020077	zc3hc1	95	41.237	Takifugu_rubripes
ENSODEG00000014604	ZC3HC1	94	44.377	ENSTNIG00000007585	zc3hc1	99	40.283	Tetraodon_nigroviridis
ENSODEG00000014604	ZC3HC1	99	76.829	ENSTBEG00000005216	ZC3HC1	99	73.653	Tupaia_belangeri
ENSODEG00000014604	ZC3HC1	94	85.220	ENSTTRG00000008458	ZC3HC1	100	82.917	Tursiops_truncatus
ENSODEG00000014604	ZC3HC1	100	85.458	ENSUAMG00000020249	ZC3HC1	100	85.657	Ursus_americanus
ENSODEG00000014604	ZC3HC1	100	85.393	ENSUMAG00000009268	ZC3HC1	100	85.259	Ursus_maritimus
ENSODEG00000014604	ZC3HC1	90	81.250	ENSVPAG00000010846	ZC3HC1	77	81.250	Vicugna_pacos
ENSODEG00000014604	ZC3HC1	95	85.112	ENSVVUG00000012386	ZC3HC1	99	83.958	Vulpes_vulpes
ENSODEG00000014604	ZC3HC1	90	52.183	ENSXETG00000033900	zc3hc1	94	52.183	Xenopus_tropicalis
ENSODEG00000014604	ZC3HC1	96	40.800	ENSXCOG00000013570	zc3hc1	94	42.147	Xiphophorus_couchianus
ENSODEG00000014604	ZC3HC1	83	47.857	ENSXMAG00000010979	zc3hc1	95	42.048	Xiphophorus_maculatus