EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014671 (Gene tree)
Gene ID: 101580529
Gene Symbol: PLEC
Alias: EBS1|PCN|PLEC1|PLTN
Full Name: plectin
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 66222 bases
Position: chrJH651619.1:3542036-3608257
Accession: 101580529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019873	S10_plectin	PF03501.15	5.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000020121	PLEC-202	13569	XM_004638889	ENSODEP00000019872	4522 (aa)	XP_004638946	UPI000C9F02E6
ENSODET00000020120	PLEC-201	2100	-	ENSODEP00000019871	700 (aa)	-	-
ENSODET00000020123	PLEC-204	1983	-	ENSODEP00000019874	661 (aa)	-	-
ENSODET00000020122	PLEC-203	3058	-	ENSODEP00000019873	963 (aa)	-	-

Gene Model

Click here to download ENSODEG00000014671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014671	PLEC	100	93.375	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSODEG00000014671	PLEC	100	94.600	ENSCAPG00000013570	PLEC	100	94.600	Cavia_aperea
ENSODEG00000014671	PLEC	100	95.436	MGP_CAROLIEiJ_G0019913	Plec	100	95.436	Mus_caroli
ENSODEG00000014671	PLEC	100	95.643	ENSMUSG00000022565	Plec	100	95.643	Mus_musculus
ENSODEG00000014671	PLEC	100	95.643	MGP_PahariEiJ_G0019923	Plec	100	95.643	Mus_pahari
ENSODEG00000014671	PLEC	100	95.539	MGP_SPRETEiJ_G0020816	Plec	100	95.539	Mus_spretus
ENSODEG00000014671	PLEC	85	92.875	ENSOCUG00000023075	-	100	92.875	Oryctolagus_cuniculus