EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000014750 (Gene tree)
Gene ID: 101565270
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 16590 bases
Position: chrJH651519.1:34661023-34677612
Accession: 101565270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000019984	zf-C2H2	PF00096.26	1.3e-19	1	2
ENSODEP00000019984	zf-C2H2	PF00096.26	1.3e-19	2	2
ENSODEP00000019984	zf-met	PF12874.7	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000020235	PRDM4-201	2403	XM_004623933	ENSODEP00000019984	800 (aa)	XP_004623990	-

Gene Model

Click here to download ENSODEG00000014750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014750	PRDM4	99	90.375	ENSG00000110851	PRDM4	99	95.946	Homo_sapiens
ENSODEG00000014750	PRDM4	99	90.852	ENSAMEG00000016174	PRDM4	99	90.727	Ailuropoda_melanoleuca
ENSODEG00000014750	PRDM4	99	84.837	ENSAPLG00000009846	PRDM4	99	84.336	Anas_platyrhynchos
ENSODEG00000014750	PRDM4	99	90.625	ENSANAG00000024800	PRDM4	99	90.738	Aotus_nancymaae
ENSODEG00000014750	PRDM4	99	89.750	ENSBTAG00000012999	PRDM4	99	90.125	Bos_taurus
ENSODEG00000014750	PRDM4	99	90.250	ENSCJAG00000015261	PRDM4	99	90.375	Callithrix_jacchus
ENSODEG00000014750	PRDM4	99	91.000	ENSCAFG00000001788	PRDM4	99	91.125	Canis_familiaris
ENSODEG00000014750	PRDM4	99	91.000	ENSCAFG00020004916	PRDM4	99	91.125	Canis_lupus_dingo
ENSODEG00000014750	PRDM4	99	89.500	ENSCHIG00000019409	PRDM4	99	89.875	Capra_hircus
ENSODEG00000014750	PRDM4	99	90.375	ENSTSYG00000009248	PRDM4	99	90.375	Carlito_syrichta
ENSODEG00000014750	PRDM4	99	90.613	ENSCAPG00000013937	PRDM4	99	89.862	Cavia_aperea
ENSODEG00000014750	PRDM4	99	90.062	ENSCPOG00000022385	PRDM4	100	89.317	Cavia_porcellus
ENSODEG00000014750	PRDM4	99	90.750	ENSCCAG00000036033	PRDM4	99	90.875	Cebus_capucinus
ENSODEG00000014750	PRDM4	99	90.125	ENSCATG00000044797	PRDM4	99	90.250	Cercocebus_atys
ENSODEG00000014750	PRDM4	99	94.521	ENSCLAG00000007545	PRDM4	100	94.396	Chinchilla_lanigera
ENSODEG00000014750	PRDM4	99	90.250	ENSCSAG00000002896	PRDM4	99	90.375	Chlorocebus_sabaeus
ENSODEG00000014750	PRDM4	71	92.661	ENSCHOG00000001744	PRDM4	83	92.661	Choloepus_hoffmanni
ENSODEG00000014750	PRDM4	99	84.548	ENSCPBG00000023187	PRDM4	100	85.302	Chrysemys_picta_bellii
ENSODEG00000014750	PRDM4	99	90.375	ENSCANG00000021804	PRDM4	99	90.500	Colobus_angolensis_palliatus
ENSODEG00000014750	PRDM4	99	87.547	ENSCGRG00001015102	-	100	87.173	Cricetulus_griseus_chok1gshd
ENSODEG00000014750	PRDM4	96	87.468	ENSCGRG00000004044	-	100	87.080	Cricetulus_griseus_crigri
ENSODEG00000014750	PRDM4	99	89.500	ENSDNOG00000032478	PRDM4	99	90.387	Dasypus_novemcinctus
ENSODEG00000014750	PRDM4	99	77.513	ENSDORG00000015081	-	100	77.136	Dipodomys_ordii
ENSODEG00000014750	PRDM4	94	45.927	ENSEBUG00000003775	prdm4	99	45.805	Eptatretus_burgeri
ENSODEG00000014750	PRDM4	99	90.250	ENSECAG00000015423	PRDM4	99	90.375	Equus_caballus
ENSODEG00000014750	PRDM4	94	86.667	ENSEEUG00000006569	PRDM4	99	87.067	Erinaceus_europaeus
ENSODEG00000014750	PRDM4	99	57.927	ENSELUG00000015265	prdm4	99	58.049	Esox_lucius
ENSODEG00000014750	PRDM4	99	90.625	ENSFCAG00000022478	PRDM4	99	90.750	Felis_catus
ENSODEG00000014750	PRDM4	99	84.925	ENSFALG00000013342	PRDM4	100	84.548	Ficedula_albicollis
ENSODEG00000014750	PRDM4	99	84.962	ENSGALG00000012619	PRDM4	99	84.461	Gallus_gallus
ENSODEG00000014750	PRDM4	99	84.296	ENSGAGG00000002763	PRDM4	95	85.050	Gopherus_agassizii
ENSODEG00000014750	PRDM4	99	90.500	ENSGGOG00000001244	PRDM4	99	90.625	Gorilla_gorilla
ENSODEG00000014750	PRDM4	99	91.332	ENSHGLG00000004590	PRDM4	98	90.955	Heterocephalus_glaber_female
ENSODEG00000014750	PRDM4	99	90.174	ENSHGLG00100007464	PRDM4	100	89.801	Heterocephalus_glaber_male
ENSODEG00000014750	PRDM4	95	60.492	ENSIPUG00000024162	prdm4	94	60.104	Ictalurus_punctatus
ENSODEG00000014750	PRDM4	99	90.715	ENSSTOG00000016168	PRDM4	99	90.464	Ictidomys_tridecemlineatus
ENSODEG00000014750	PRDM4	99	88.302	ENSJJAG00000022448	-	96	88.740	Jaculus_jaculus
ENSODEG00000014750	PRDM4	99	72.070	ENSLACG00000007452	PRDM4	99	71.945	Latimeria_chalumnae
ENSODEG00000014750	PRDM4	78	41.867	ENSLOCG00000017092	prdm4	100	53.478	Lepisosteus_oculatus
ENSODEG00000014750	PRDM4	97	90.482	ENSLAFG00000001483	PRDM4	100	90.609	Loxodonta_africana
ENSODEG00000014750	PRDM4	99	90.375	ENSMFAG00000041862	PRDM4	99	90.500	Macaca_fascicularis
ENSODEG00000014750	PRDM4	99	90.488	ENSMMUG00000015550	PRDM4	99	90.613	Macaca_mulatta
ENSODEG00000014750	PRDM4	99	90.375	ENSMNEG00000032319	PRDM4	99	90.500	Macaca_nemestrina
ENSODEG00000014750	PRDM4	99	90.250	ENSMLEG00000039607	PRDM4	99	90.375	Mandrillus_leucophaeus
ENSODEG00000014750	PRDM4	99	77.347	ENSMGAG00000012815	PRDM4	100	76.846	Meleagris_gallopavo
ENSODEG00000014750	PRDM4	99	89.250	ENSMICG00000007807	PRDM4	99	89.375	Microcebus_murinus
ENSODEG00000014750	PRDM4	99	89.322	ENSMOCG00000000753	Prdm4	99	88.945	Microtus_ochrogaster
ENSODEG00000014750	PRDM4	99	88.442	ENSMUSG00000035529	Prdm4	100	88.191	Mus_musculus
ENSODEG00000014750	PRDM4	99	88.708	MGP_PahariEiJ_G0031398	Prdm4	100	88.708	Mus_pahari
ENSODEG00000014750	PRDM4	99	88.457	MGP_SPRETEiJ_G0016505	Prdm4	100	88.582	Mus_spretus
ENSODEG00000014750	PRDM4	99	85.571	ENSMPUG00000012238	PRDM4	99	84.925	Mustela_putorius_furo
ENSODEG00000014750	PRDM4	99	90.464	ENSMLUG00000000767	PRDM4	99	90.590	Myotis_lucifugus
ENSODEG00000014750	PRDM4	99	88.457	ENSNGAG00000018627	Prdm4	100	89.084	Nannospalax_galili
ENSODEG00000014750	PRDM4	99	90.500	ENSNLEG00000006748	PRDM4	99	90.625	Nomascus_leucogenys
ENSODEG00000014750	PRDM4	89	87.324	ENSMEUG00000004495	PRDM4	89	86.854	Notamacropus_eugenii
ENSODEG00000014750	PRDM4	88	90.179	ENSOPRG00000010192	PRDM4	89	89.583	Ochotona_princeps
ENSODEG00000014750	PRDM4	99	87.000	ENSOANG00000005526	PRDM4	99	87.000	Ornithorhynchus_anatinus
ENSODEG00000014750	PRDM4	93	91.559	ENSOCUG00000012859	PRDM4	96	91.273	Oryctolagus_cuniculus
ENSODEG00000014750	PRDM4	99	90.704	ENSOGAG00000011945	PRDM4	100	91.080	Otolemur_garnettii
ENSODEG00000014750	PRDM4	99	89.500	ENSOARG00000017955	PRDM4	99	89.875	Ovis_aries
ENSODEG00000014750	PRDM4	99	90.500	ENSPPAG00000038438	PRDM4	99	90.625	Pan_paniscus
ENSODEG00000014750	PRDM4	99	90.625	ENSPPRG00000004144	PRDM4	99	90.750	Panthera_pardus
ENSODEG00000014750	PRDM4	99	90.625	ENSPTIG00000005847	PRDM4	99	90.750	Panthera_tigris_altaica
ENSODEG00000014750	PRDM4	99	90.375	ENSPTRG00000005400	PRDM4	99	90.500	Pan_troglodytes
ENSODEG00000014750	PRDM4	99	90.375	ENSPANG00000022084	PRDM4	99	90.500	Papio_anubis
ENSODEG00000014750	PRDM4	99	59.286	ENSPKIG00000000875	prdm4	100	59.360	Paramormyrops_kingsleyae
ENSODEG00000014750	PRDM4	91	78.261	ENSPSIG00000012066	PRDM4	100	78.261	Pelodiscus_sinensis
ENSODEG00000014750	PRDM4	99	89.460	ENSPEMG00000014598	Prdm4	100	88.959	Peromyscus_maniculatus_bairdii
ENSODEG00000014750	PRDM4	99	87.422	ENSPCIG00000009471	PRDM4	99	87.049	Phascolarctos_cinereus
ENSODEG00000014750	PRDM4	99	90.500	ENSPPYG00000004913	PRDM4	99	90.625	Pongo_abelii
ENSODEG00000014750	PRDM4	83	89.968	ENSPCAG00000009987	PRDM4	83	89.806	Procavia_capensis
ENSODEG00000014750	PRDM4	99	89.000	ENSPCOG00000021060	PRDM4	99	89.125	Propithecus_coquereli
ENSODEG00000014750	PRDM4	99	88.750	ENSPVAG00000001596	PRDM4	99	89.125	Pteropus_vampyrus
ENSODEG00000014750	PRDM4	99	88.471	ENSRNOG00000004962	Prdm4	100	88.471	Rattus_norvegicus
ENSODEG00000014750	PRDM4	99	90.375	ENSRBIG00000035488	PRDM4	99	90.500	Rhinopithecus_bieti
ENSODEG00000014750	PRDM4	99	90.500	ENSRROG00000012779	PRDM4	99	90.625	Rhinopithecus_roxellana
ENSODEG00000014750	PRDM4	99	90.750	ENSSBOG00000000403	PRDM4	99	90.875	Saimiri_boliviensis_boliviensis
ENSODEG00000014750	PRDM4	99	62.546	ENSSFOG00015023358	prdm4	98	62.252	Scleropages_formosus
ENSODEG00000014750	PRDM4	99	90.250	ENSSSCG00000000160	PRDM4	99	90.375	Sus_scrofa
ENSODEG00000014750	PRDM4	99	85.088	ENSTGUG00000010962	-	99	84.712	Taeniopygia_guttata
ENSODEG00000014750	PRDM4	73	83.276	ENSTBEG00000001732	PRDM4	84	82.765	Tupaia_belangeri
ENSODEG00000014750	PRDM4	99	91.125	ENSTTRG00000011056	PRDM4	99	91.250	Tursiops_truncatus
ENSODEG00000014750	PRDM4	99	90.750	ENSUAMG00000022796	PRDM4	99	90.875	Ursus_americanus
ENSODEG00000014750	PRDM4	99	90.750	ENSUMAG00000017231	PRDM4	99	90.875	Ursus_maritimus
ENSODEG00000014750	PRDM4	99	90.841	ENSVPAG00000002215	PRDM4	100	90.715	Vicugna_pacos
ENSODEG00000014750	PRDM4	99	91.000	ENSVVUG00000023397	PRDM4	99	91.125	Vulpes_vulpes