EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000014801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 400 bases
Position: chrJH651522.1:18895523-18895922
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000020067	RNA_pol_L_2	PF13656.6	7.5e-20	1	1
ENSODEP00000020067	RNA_pol_L	PF01193.24	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000020318	-	360	-	ENSODEP00000020067	119 (aa)	-	-

Gene Model

Click here to download ENSODEG00000014801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000014801	-	100	85.714	ENSODEG00000005294	-	100	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014801	-	100	81.203	ENSG00000186184	POLR1D	100	81.203	Homo_sapiens
ENSODEG00000014801	-	76	57.143	ENSAPOG00000021882	polr1d	95	57.143	Acanthochromis_polyacanthus
ENSODEG00000014801	-	93	80.000	ENSAMEG00000019095	POLR1D	100	80.000	Ailuropoda_melanoleuca
ENSODEG00000014801	-	71	63.636	ENSACIG00000013328	polr1d	86	63.636	Amphilophus_citrinellus
ENSODEG00000014801	-	82	57.143	ENSAOCG00000018500	polr1d	98	57.143	Amphiprion_ocellaris
ENSODEG00000014801	-	82	56.250	ENSAPEG00000009489	polr1d	98	56.250	Amphiprion_percula
ENSODEG00000014801	-	77	57.547	ENSATEG00000019322	polr1d	93	57.547	Anabas_testudineus
ENSODEG00000014801	-	95	57.018	ENSACAG00000015753	POLR1D	98	57.018	Anolis_carolinensis
ENSODEG00000014801	-	100	81.203	ENSANAG00000024486	POLR1D	100	81.203	Aotus_nancymaae
ENSODEG00000014801	-	80	60.417	ENSACLG00000023805	polr1d	95	59.813	Astatotilapia_calliptera
ENSODEG00000014801	-	77	53.774	ENSAMXG00000036118	polr1d	92	53.774	Astyanax_mexicanus
ENSODEG00000014801	-	100	78.195	ENSBTAG00000033252	-	100	78.195	Bos_taurus
ENSODEG00000014801	-	100	78.195	ENSBTAG00000008642	POLR1D	100	78.195	Bos_taurus
ENSODEG00000014801	-	100	81.955	ENSCJAG00000044669	POLR1D	100	81.955	Callithrix_jacchus
ENSODEG00000014801	-	100	81.203	ENSCAFG00000006755	POLR1D	100	81.203	Canis_familiaris
ENSODEG00000014801	-	100	78.947	ENSCHIG00000021910	POLR1D	100	78.947	Capra_hircus
ENSODEG00000014801	-	92	76.613	ENSTSYG00000026817	-	93	76.613	Carlito_syrichta
ENSODEG00000014801	-	100	66.912	ENSTSYG00000034852	-	100	66.912	Carlito_syrichta
ENSODEG00000014801	-	96	57.895	ENSCAPG00000006058	-	99	57.895	Cavia_aperea
ENSODEG00000014801	-	96	57.895	ENSCPOG00000030450	-	99	57.895	Cavia_porcellus
ENSODEG00000014801	-	100	79.699	ENSCCAG00000021349	-	100	79.699	Cebus_capucinus
ENSODEG00000014801	-	100	81.513	ENSCCAG00000020191	-	100	81.513	Cebus_capucinus
ENSODEG00000014801	-	100	79.699	ENSCATG00000030710	-	100	79.699	Cercocebus_atys
ENSODEG00000014801	-	100	80.952	ENSCATG00000022900	-	100	80.952	Cercocebus_atys
ENSODEG00000014801	-	92	83.065	ENSCLAG00000017623	POLR1D	100	83.065	Chinchilla_lanigera
ENSODEG00000014801	-	71	65.882	ENSCPBG00000004719	POLR1D	96	64.948	Chrysemys_picta_bellii
ENSODEG00000014801	-	100	79.699	ENSCANG00000028632	-	100	79.699	Colobus_angolensis_palliatus
ENSODEG00000014801	-	100	78.947	ENSCANG00000037694	-	100	78.947	Colobus_angolensis_palliatus
ENSODEG00000014801	-	100	78.947	ENSCGRG00001021251	Polr1d	100	78.947	Cricetulus_griseus_chok1gshd
ENSODEG00000014801	-	100	78.947	ENSCGRG00000011639	Polr1d	100	78.947	Cricetulus_griseus_crigri
ENSODEG00000014801	-	84	56.140	ENSCSEG00000018268	polr1d	91	58.491	Cynoglossus_semilaevis
ENSODEG00000014801	-	76	60.000	ENSCVAG00000018527	polr1d	92	60.000	Cyprinodon_variegatus
ENSODEG00000014801	-	78	56.075	ENSDARG00000037570	polr1d	96	56.075	Danio_rerio
ENSODEG00000014801	-	100	79.699	ENSDNOG00000043676	-	100	79.699	Dasypus_novemcinctus
ENSODEG00000014801	-	100	78.358	ENSDNOG00000046247	-	100	78.358	Dasypus_novemcinctus
ENSODEG00000014801	-	100	79.699	ENSDORG00000029155	Polr1d	100	79.699	Dipodomys_ordii
ENSODEG00000014801	-	71	41.176	FBgn0086447	l(2)37Cg	77	41.176	Drosophila_melanogaster
ENSODEG00000014801	-	92	75.806	ENSETEG00000012797	POLR1D	100	75.806	Echinops_telfairi
ENSODEG00000014801	-	79	56.842	ENSEBUG00000011748	polr1d	66	56.842	Eptatretus_burgeri
ENSODEG00000014801	-	94	80.159	ENSEASG00005022487	POLR1D	98	80.159	Equus_asinus_asinus
ENSODEG00000014801	-	92	79.839	ENSEEUG00000013144	POLR1D	100	79.839	Erinaceus_europaeus
ENSODEG00000014801	-	77	57.547	ENSELUG00000005105	rpac2	93	57.547	Esox_lucius
ENSODEG00000014801	-	100	79.699	ENSFCAG00000030162	POLR1D	100	79.699	Felis_catus
ENSODEG00000014801	-	69	67.073	ENSFALG00000011463	POLR1D	81	67.073	Ficedula_albicollis
ENSODEG00000014801	-	100	81.203	ENSFDAG00000004463	POLR1D	100	81.203	Fukomys_damarensis
ENSODEG00000014801	-	78	62.963	ENSFHEG00000015410	polr1d	94	62.963	Fundulus_heteroclitus
ENSODEG00000014801	-	51	67.213	ENSGALG00000007470	POLR1D	60	67.213	Gallus_gallus
ENSODEG00000014801	-	81	59.794	ENSGAFG00000001693	polr1d	92	60.952	Gambusia_affinis
ENSODEG00000014801	-	87	56.780	ENSGACG00000018585	polr1d	100	56.780	Gasterosteus_aculeatus
ENSODEG00000014801	-	76	66.667	ENSGAGG00000008503	POLR1D	92	66.667	Gopherus_agassizii
ENSODEG00000014801	-	100	81.203	ENSGGOG00000004235	POLR1D	100	81.203	Gorilla_gorilla
ENSODEG00000014801	-	77	60.377	ENSHBUG00000002111	polr1d	93	60.377	Haplochromis_burtoni
ENSODEG00000014801	-	100	81.203	ENSHGLG00000003202	POLR1D	100	81.203	Heterocephalus_glaber_female
ENSODEG00000014801	-	100	81.203	ENSHGLG00100009393	POLR1D	100	81.203	Heterocephalus_glaber_male
ENSODEG00000014801	-	77	59.434	ENSHCOG00000003258	polr1d	93	59.434	Hippocampus_comes
ENSODEG00000014801	-	76	60.000	ENSIPUG00000014810	polr1d	91	60.000	Ictalurus_punctatus
ENSODEG00000014801	-	100	81.955	ENSSTOG00000013877	POLR1D	100	81.955	Ictidomys_tridecemlineatus
ENSODEG00000014801	-	94	60.317	ENSJJAG00000021667	-	75	60.317	Jaculus_jaculus
ENSODEG00000014801	-	97	72.932	ENSJJAG00000022671	-	100	74.167	Jaculus_jaculus
ENSODEG00000014801	-	76	58.095	ENSKMAG00000015256	polr1d	92	58.095	Kryptolebias_marmoratus
ENSODEG00000014801	-	76	59.048	ENSLBEG00000015919	polr1d	92	59.048	Labrus_bergylta
ENSODEG00000014801	-	86	55.172	ENSLACG00000006810	POLR1D	96	55.172	Latimeria_chalumnae
ENSODEG00000014801	-	100	72.180	ENSLAFG00000032290	POLR1D	100	72.180	Loxodonta_africana
ENSODEG00000014801	-	93	78.400	ENSMFAG00000045264	POLR1D	97	78.400	Macaca_fascicularis
ENSODEG00000014801	-	100	76.471	ENSMMUG00000041570	-	100	76.471	Macaca_mulatta
ENSODEG00000014801	-	86	77.586	ENSMMUG00000020386	POLR1D	100	77.586	Macaca_mulatta
ENSODEG00000014801	-	100	78.333	ENSMNEG00000038120	-	100	78.333	Macaca_nemestrina
ENSODEG00000014801	-	100	80.451	ENSMNEG00000008630	-	100	80.451	Macaca_nemestrina
ENSODEG00000014801	-	100	80.451	ENSMLEG00000041048	-	100	80.451	Mandrillus_leucophaeus
ENSODEG00000014801	-	100	80.159	ENSMLEG00000032251	-	100	80.159	Mandrillus_leucophaeus
ENSODEG00000014801	-	71	60.606	ENSMAMG00000014834	polr1d	93	60.606	Mastacembelus_armatus
ENSODEG00000014801	-	78	59.813	ENSMZEG00005006638	polr1d	95	59.813	Maylandia_zebra
ENSODEG00000014801	-	71	64.706	ENSMGAG00000005322	POLR1D	78	64.706	Meleagris_gallopavo
ENSODEG00000014801	-	100	78.947	ENSMAUG00000001946	Polr1d	100	78.947	Mesocricetus_auratus
ENSODEG00000014801	-	100	80.451	ENSMICG00000016883	-	100	80.451	Microcebus_murinus
ENSODEG00000014801	-	99	69.697	ENSMICG00000007349	-	100	69.697	Microcebus_murinus
ENSODEG00000014801	-	99	78.030	ENSMOCG00000021288	Polr1d	99	78.030	Microtus_ochrogaster
ENSODEG00000014801	-	77	56.604	ENSMMOG00000009605	polr1d	93	56.604	Mola_mola
ENSODEG00000014801	-	76	68.571	ENSMODG00000023881	POLR1D	92	68.571	Monodelphis_domestica
ENSODEG00000014801	-	76	57.692	ENSMALG00000010652	polr1d	91	57.692	Monopterus_albus
ENSODEG00000014801	-	100	75.188	MGP_CAROLIEiJ_G0028034	Polr1d	100	75.188	Mus_caroli
ENSODEG00000014801	-	100	75.188	ENSMUSG00000029642	Polr1d	100	75.188	Mus_musculus
ENSODEG00000014801	-	100	74.436	MGP_PahariEiJ_G0024600	Polr1d	100	74.436	Mus_pahari
ENSODEG00000014801	-	100	75.940	MGP_SPRETEiJ_G0029032	Polr1d	100	75.940	Mus_spretus
ENSODEG00000014801	-	100	78.947	ENSMLUG00000027169	-	100	78.947	Myotis_lucifugus
ENSODEG00000014801	-	99	71.212	ENSMLUG00000004118	-	99	71.212	Myotis_lucifugus
ENSODEG00000014801	-	86	76.724	ENSNGAG00000006014	Polr1d	100	76.724	Nannospalax_galili
ENSODEG00000014801	-	77	60.377	ENSNBRG00000020327	polr1d	93	60.377	Neolamprologus_brichardi
ENSODEG00000014801	-	100	81.203	ENSNLEG00000000358	POLR1D	100	81.203	Nomascus_leucogenys
ENSODEG00000014801	-	87	61.165	ENSOANG00000008708	-	97	66.667	Ornithorhynchus_anatinus
ENSODEG00000014801	-	100	78.947	ENSOCUG00000015706	POLR1D	82	78.947	Oryctolagus_cuniculus
ENSODEG00000014801	-	77	60.377	ENSORLG00000010257	polr1d	93	60.377	Oryzias_latipes
ENSODEG00000014801	-	82	58.559	ENSORLG00020000533	polr1d	75	58.559	Oryzias_latipes_hni
ENSODEG00000014801	-	83	59.292	ENSORLG00015013267	polr1d	75	59.292	Oryzias_latipes_hsok
ENSODEG00000014801	-	87	57.627	ENSOMEG00000014912	polr1d	79	57.627	Oryzias_melastigma
ENSODEG00000014801	-	100	80.451	ENSOGAG00000014601	POLR1D	100	80.451	Otolemur_garnettii
ENSODEG00000014801	-	93	77.600	ENSOARG00000017005	POLR1D	96	77.600	Ovis_aries
ENSODEG00000014801	-	100	80.451	ENSPPAG00000028138	POLR1D	100	80.451	Pan_paniscus
ENSODEG00000014801	-	99	79.545	ENSPPRG00000003381	POLR1D	99	79.545	Panthera_pardus
ENSODEG00000014801	-	92	78.226	ENSPTIG00000018137	POLR1D	93	78.226	Panthera_tigris_altaica
ENSODEG00000014801	-	100	81.203	ENSPTRG00000005734	POLR1D	100	81.203	Pan_troglodytes
ENSODEG00000014801	-	100	80.159	ENSPANG00000035051	-	100	80.159	Papio_anubis
ENSODEG00000014801	-	100	80.451	ENSPANG00000020259	-	100	80.451	Papio_anubis
ENSODEG00000014801	-	78	59.574	ENSPKIG00000021891	polr1d	90	44.737	Paramormyrops_kingsleyae
ENSODEG00000014801	-	81	63.063	ENSPSIG00000011822	POLR1D	86	63.063	Pelodiscus_sinensis
ENSODEG00000014801	-	87	50.000	ENSPMGG00000012998	POLR1D	87	50.000	Periophthalmus_magnuspinnatus
ENSODEG00000014801	-	76	58.095	ENSPMGG00000010359	polr1d	91	58.095	Periophthalmus_magnuspinnatus
ENSODEG00000014801	-	100	75.940	ENSPEMG00000006336	-	100	75.940	Peromyscus_maniculatus_bairdii
ENSODEG00000014801	-	75	59.551	ENSPMAG00000004228	polr1d	75	59.551	Petromyzon_marinus
ENSODEG00000014801	-	76	68.571	ENSPCIG00000001673	POLR1D	92	68.571	Phascolarctos_cinereus
ENSODEG00000014801	-	76	60.952	ENSPFOG00000023343	polr1d	89	70.130	Poecilia_formosa
ENSODEG00000014801	-	76	60.952	ENSPLAG00000009675	polr1d	92	60.952	Poecilia_latipinna
ENSODEG00000014801	-	76	60.952	ENSPMEG00000004628	polr1d	92	60.952	Poecilia_mexicana
ENSODEG00000014801	-	76	60.952	ENSPREG00000022032	polr1d	92	60.952	Poecilia_reticulata
ENSODEG00000014801	-	100	80.451	ENSPCOG00000028175	POLR1D	100	80.451	Propithecus_coquereli
ENSODEG00000014801	-	77	60.377	ENSPNYG00000000107	polr1d	93	60.377	Pundamilia_nyererei
ENSODEG00000014801	-	73	54.455	ENSPNAG00000001512	polr1d	87	53.846	Pygocentrus_nattereri
ENSODEG00000014801	-	100	77.444	ENSRBIG00000000336	-	100	77.444	Rhinopithecus_bieti
ENSODEG00000014801	-	100	80.451	ENSRBIG00000036378	-	100	80.451	Rhinopithecus_bieti
ENSODEG00000014801	-	100	77.444	ENSRROG00000026751	-	100	77.444	Rhinopithecus_roxellana
ENSODEG00000014801	-	100	80.451	ENSRROG00000042232	-	100	80.451	Rhinopithecus_roxellana
ENSODEG00000014801	-	76	47.253	YNL113W	RPC19	70	46.000	Saccharomyces_cerevisiae
ENSODEG00000014801	-	100	81.203	ENSSBOG00000028482	-	100	81.203	Saimiri_boliviensis_boliviensis
ENSODEG00000014801	-	88	76.471	ENSSBOG00000030146	-	88	76.471	Saimiri_boliviensis_boliviensis
ENSODEG00000014801	-	84	62.281	ENSSHAG00000001190	POLR1D	88	62.281	Sarcophilus_harrisii
ENSODEG00000014801	-	82	56.757	ENSSFOG00015011375	polr1d	97	56.757	Scleropages_formosus
ENSODEG00000014801	-	77	57.547	ENSSMAG00000011861	polr1d	93	57.547	Scophthalmus_maximus
ENSODEG00000014801	-	77	56.604	ENSSDUG00000011930	polr1d	93	56.604	Seriola_dumerili
ENSODEG00000014801	-	85	51.304	ENSSLDG00000023871	polr1d	97	51.304	Seriola_lalandi_dorsalis
ENSODEG00000014801	-	100	79.699	ENSSARG00000007840	POLR1D	100	79.699	Sorex_araneus
ENSODEG00000014801	-	82	63.636	ENSSPUG00000005786	POLR1D	100	57.265	Sphenodon_punctatus
ENSODEG00000014801	-	76	60.952	ENSSPAG00000011764	polr1d	92	60.952	Stegastes_partitus
ENSODEG00000014801	-	100	78.947	ENSSSCG00000009310	POLR1D	100	78.947	Sus_scrofa
ENSODEG00000014801	-	77	63.441	ENSTGUG00000005450	POLR1D	97	63.441	Taeniopygia_guttata
ENSODEG00000014801	-	76	56.731	ENSTRUG00000019741	polr1d	91	56.731	Takifugu_rubripes
ENSODEG00000014801	-	92	77.419	ENSTBEG00000007006	POLR1D	100	77.419	Tupaia_belangeri
ENSODEG00000014801	-	100	81.203	ENSUAMG00000011413	POLR1D	100	81.203	Ursus_americanus
ENSODEG00000014801	-	92	79.839	ENSUMAG00000016968	POLR1D	97	79.839	Ursus_maritimus
ENSODEG00000014801	-	100	81.203	ENSVVUG00000009216	POLR1D	100	81.203	Vulpes_vulpes
ENSODEG00000014801	-	71	62.245	ENSXCOG00000011731	polr1d	75	62.245	Xiphophorus_couchianus
ENSODEG00000014801	-	71	62.245	ENSXMAG00000017538	polr1d	75	62.245	Xiphophorus_maculatus