EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000014838 (Gene tree)
Gene ID: 101581279
Gene Symbol: SAFB
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 36336 bases
Position: chrJH651565.1:9338502-9374837
Accession: 101581279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000020118	RRM_5	PF13893.6	1.4e-06	1	1
ENSODEP00000020116	RRM_5	PF13893.6	1.4e-06	1	1
ENSODEP00000020117	RRM_5	PF13893.6	1.4e-06	1	1
ENSODEP00000020118	RRM_1	PF00076.22	2.5e-13	1	1
ENSODEP00000020117	RRM_1	PF00076.22	2.6e-13	1	1
ENSODEP00000020116	RRM_1	PF00076.22	2.6e-13	1	1
ENSODEP00000020118	SAP	PF02037.27	8.2e-11	1	1
ENSODEP00000020117	SAP	PF02037.27	8.3e-11	1	1
ENSODEP00000020116	SAP	PF02037.27	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000020367	SAFB-201	2814	-	ENSODEP00000020116	937 (aa)	-	-
ENSODET00000020369	SAFB-203	2778	-	ENSODEP00000020118	925 (aa)	-	-
ENSODET00000020368	SAFB-202	2805	XM_004632774	ENSODEP00000020117	934 (aa)	XP_004632832	-

Gene Model

Click here to download ENSODEG00000014838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000014838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000014838	SAFB	97	62.461	ENSODEG00000014751	SAFB2	62	69.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000014838	SAFB	100	90.502	ENSG00000160633	SAFB	100	90.502	Homo_sapiens
ENSODEG00000014838	SAFB	100	89.883	ENSAMEG00000012254	SAFB	100	89.031	Ailuropoda_melanoleuca
ENSODEG00000014838	SAFB	94	39.462	ENSACIG00000006247	safb	70	42.697	Amphilophus_citrinellus
ENSODEG00000014838	SAFB	93	44.260	ENSAOCG00000006308	safb	57	56.044	Amphiprion_ocellaris
ENSODEG00000014838	SAFB	90	62.266	ENSAPLG00000006355	-	65	59.825	Anas_platyrhynchos
ENSODEG00000014838	SAFB	94	63.431	ENSAPLG00000005780	-	100	63.657	Anas_platyrhynchos
ENSODEG00000014838	SAFB	100	89.968	ENSANAG00000028821	SAFB	100	89.968	Aotus_nancymaae
ENSODEG00000014838	SAFB	91	44.596	ENSAMXG00000018154	safb	63	42.434	Astyanax_mexicanus
ENSODEG00000014838	SAFB	100	86.019	ENSBTAG00000007875	SAFB	100	86.019	Bos_taurus
ENSODEG00000014838	SAFB	94	94.811	ENSCJAG00000017081	SAFB	100	94.811	Callithrix_jacchus
ENSODEG00000014838	SAFB	100	91.142	ENSCAFG00000018803	SAFB	87	91.142	Canis_familiaris
ENSODEG00000014838	SAFB	100	91.142	ENSCAFG00020018943	SAFB	100	91.142	Canis_lupus_dingo
ENSODEG00000014838	SAFB	100	84.845	ENSCHIG00000007262	SAFB	98	91.038	Capra_hircus
ENSODEG00000014838	SAFB	57	76.966	ENSTSYG00000001851	-	53	89.259	Carlito_syrichta
ENSODEG00000014838	SAFB	93	85.930	ENSCAPG00000012121	SAFB	97	92.321	Cavia_aperea
ENSODEG00000014838	SAFB	100	94.894	ENSCPOG00000026322	SAFB	100	94.894	Cavia_porcellus
ENSODEG00000014838	SAFB	100	90.299	ENSCCAG00000020193	SAFB	100	90.192	Cebus_capucinus
ENSODEG00000014838	SAFB	100	90.395	ENSCATG00000029994	SAFB	100	90.395	Cercocebus_atys
ENSODEG00000014838	SAFB	100	98.503	ENSCLAG00000007734	SAFB	100	98.503	Chinchilla_lanigera
ENSODEG00000014838	SAFB	100	90.502	ENSCSAG00000009949	SAFB	100	90.502	Chlorocebus_sabaeus
ENSODEG00000014838	SAFB	87	95.238	ENSCHOG00000003208	SAFB	93	95.238	Choloepus_hoffmanni
ENSODEG00000014838	SAFB	91	60.576	ENSCPBG00000010936	-	63	58.319	Chrysemys_picta_bellii
ENSODEG00000014838	SAFB	91	62.920	ENSCPBG00000010928	-	99	58.641	Chrysemys_picta_bellii
ENSODEG00000014838	SAFB	96	93.035	ENSCANG00000004774	-	99	93.035	Colobus_angolensis_palliatus
ENSODEG00000014838	SAFB	100	84.525	ENSCANG00000019754	-	100	84.525	Colobus_angolensis_palliatus
ENSODEG00000014838	SAFB	100	86.547	ENSCGRG00001002254	Safb	100	86.547	Cricetulus_griseus_chok1gshd
ENSODEG00000014838	SAFB	90	84.055	ENSCGRG00000011529	Safb	96	84.055	Cricetulus_griseus_crigri
ENSODEG00000014838	SAFB	94	40.136	ENSCSEG00000019870	safb	65	39.057	Cynoglossus_semilaevis
ENSODEG00000014838	SAFB	90	41.427	ENSDARG00000020467	safb	60	59.167	Danio_rerio
ENSODEG00000014838	SAFB	100	89.126	ENSDNOG00000015746	SAFB	95	88.856	Dasypus_novemcinctus
ENSODEG00000014838	SAFB	100	86.758	ENSDORG00000016200	Safb	100	86.575	Dipodomys_ordii
ENSODEG00000014838	SAFB	80	84.058	ENSETEG00000018679	SAFB	85	84.058	Echinops_telfairi
ENSODEG00000014838	SAFB	100	86.624	ENSEASG00005023019	SAFB	100	85.881	Equus_asinus_asinus
ENSODEG00000014838	SAFB	100	88.367	ENSECAG00000018659	SAFB	89	88.474	Equus_caballus
ENSODEG00000014838	SAFB	96	42.263	ENSELUG00000022327	safb	67	50.476	Esox_lucius
ENSODEG00000014838	SAFB	100	91.453	ENSFCAG00000011835	SAFB	100	91.453	Felis_catus
ENSODEG00000014838	SAFB	91	57.508	ENSFALG00000013881	-	64	58.204	Ficedula_albicollis
ENSODEG00000014838	SAFB	100	63.358	ENSFALG00000013882	-	92	58.571	Ficedula_albicollis
ENSODEG00000014838	SAFB	96	90.714	ENSFDAG00000020306	SAFB	100	97.302	Fukomys_damarensis
ENSODEG00000014838	SAFB	100	64.233	ENSGALG00000013365	-	100	63.492	Gallus_gallus
ENSODEG00000014838	SAFB	100	60.102	ENSGALG00000001948	-	67	58.195	Gallus_gallus
ENSODEG00000014838	SAFB	96	61.547	ENSGAGG00000008424	-	67	59.937	Gopherus_agassizii
ENSODEG00000014838	SAFB	73	58.032	ENSGAGG00000017702	-	97	53.485	Gopherus_agassizii
ENSODEG00000014838	SAFB	100	90.288	ENSGGOG00000015109	SAFB	100	90.288	Gorilla_gorilla
ENSODEG00000014838	SAFB	95	38.428	ENSHBUG00000009218	safb	67	41.294	Haplochromis_burtoni
ENSODEG00000014838	SAFB	100	98.073	ENSHGLG00000015883	SAFB	100	98.073	Heterocephalus_glaber_female
ENSODEG00000014838	SAFB	91	36.291	ENSHCOG00000001705	safb	64	36.222	Hippocampus_comes
ENSODEG00000014838	SAFB	97	42.904	ENSIPUG00000024869	safb2	63	44.901	Ictalurus_punctatus
ENSODEG00000014838	SAFB	93	94.725	ENSSTOG00000002783	SAFB	100	94.725	Ictidomys_tridecemlineatus
ENSODEG00000014838	SAFB	100	88.360	ENSJJAG00000009021	Safb	100	88.571	Jaculus_jaculus
ENSODEG00000014838	SAFB	64	50.647	ENSLACG00000018090	SAFB	66	50.786	Latimeria_chalumnae
ENSODEG00000014838	SAFB	96	45.650	ENSLOCG00000003613	safb	74	44.427	Lepisosteus_oculatus
ENSODEG00000014838	SAFB	99	87.245	ENSLAFG00000003840	SAFB	100	86.817	Loxodonta_africana
ENSODEG00000014838	SAFB	100	90.299	ENSMFAG00000003885	SAFB	100	90.192	Macaca_fascicularis
ENSODEG00000014838	SAFB	100	90.395	ENSMMUG00000017970	SAFB	100	90.395	Macaca_mulatta
ENSODEG00000014838	SAFB	100	86.674	ENSMNEG00000035637	SAFB	100	86.247	Macaca_nemestrina
ENSODEG00000014838	SAFB	100	84.803	ENSMLEG00000038637	SAFB	88	95.699	Mandrillus_leucophaeus
ENSODEG00000014838	SAFB	90	41.779	ENSMZEG00005009120	safb	65	41.997	Maylandia_zebra
ENSODEG00000014838	SAFB	97	61.749	ENSMGAG00000001101	-	100	60.941	Meleagris_gallopavo
ENSODEG00000014838	SAFB	89	59.364	ENSMGAG00000001051	-	100	59.600	Meleagris_gallopavo
ENSODEG00000014838	SAFB	52	92.181	ENSMAUG00000005013	Safb	100	92.181	Mesocricetus_auratus
ENSODEG00000014838	SAFB	100	86.553	ENSMICG00000008739	-	100	85.806	Microcebus_murinus
ENSODEG00000014838	SAFB	85	75.720	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSODEG00000014838	SAFB	100	86.638	ENSMOCG00000014040	Safb	100	86.638	Microtus_ochrogaster
ENSODEG00000014838	SAFB	100	73.069	ENSMODG00000001236	SAFB	100	73.069	Monodelphis_domestica
ENSODEG00000014838	SAFB	93	41.477	ENSMALG00000020330	safb	68	40.916	Monopterus_albus
ENSODEG00000014838	SAFB	100	86.943	MGP_CAROLIEiJ_G0021780	Safb	100	86.943	Mus_caroli
ENSODEG00000014838	SAFB	100	87.049	ENSMUSG00000071054	Safb	100	87.049	Mus_musculus
ENSODEG00000014838	SAFB	100	86.610	MGP_PahariEiJ_G0020769	Safb	100	86.610	Mus_pahari
ENSODEG00000014838	SAFB	100	90.608	ENSMPUG00000006123	SAFB	94	90.608	Mustela_putorius_furo
ENSODEG00000014838	SAFB	100	89.968	ENSMLUG00000001081	SAFB	100	89.968	Myotis_lucifugus
ENSODEG00000014838	SAFB	100	85.244	ENSNGAG00000019882	Safb	100	85.244	Nannospalax_galili
ENSODEG00000014838	SAFB	96	90.323	ENSNLEG00000013551	SAFB	100	90.211	Nomascus_leucogenys
ENSODEG00000014838	SAFB	89	83.654	ENSOPRG00000011561	-	100	84.375	Ochotona_princeps
ENSODEG00000014838	SAFB	94	40.841	ENSONIG00000002318	safb	64	42.763	Oreochromis_niloticus
ENSODEG00000014838	SAFB	90	81.014	ENSOCUG00000014628	SAFB	63	84.288	Oryctolagus_cuniculus
ENSODEG00000014838	SAFB	90	42.710	ENSORLG00000016989	safb	64	40.783	Oryzias_latipes
ENSODEG00000014838	SAFB	94	40.930	ENSORLG00020000404	safb	51	56.612	Oryzias_latipes_hni
ENSODEG00000014838	SAFB	100	85.016	ENSOGAG00000027769	SAFB	100	84.272	Otolemur_garnettii
ENSODEG00000014838	SAFB	100	82.284	ENSOARG00000007662	-	100	80.363	Ovis_aries
ENSODEG00000014838	SAFB	78	79.428	ENSOARG00000007856	-	100	79.155	Ovis_aries
ENSODEG00000014838	SAFB	100	90.299	ENSPPAG00000035129	SAFB	100	90.192	Pan_paniscus
ENSODEG00000014838	SAFB	100	91.453	ENSPPRG00000017197	SAFB	100	91.453	Panthera_pardus
ENSODEG00000014838	SAFB	100	90.299	ENSPTRG00000010335	SAFB	100	90.192	Pan_troglodytes
ENSODEG00000014838	SAFB	100	90.405	ENSPANG00000007770	SAFB	100	90.299	Papio_anubis
ENSODEG00000014838	SAFB	95	42.150	ENSPKIG00000009902	safb	85	41.126	Paramormyrops_kingsleyae
ENSODEG00000014838	SAFB	100	61.364	ENSPSIG00000011679	-	64	61.168	Pelodiscus_sinensis
ENSODEG00000014838	SAFB	99	60.950	ENSPSIG00000009367	-	63	58.900	Pelodiscus_sinensis
ENSODEG00000014838	SAFB	100	87.261	ENSPEMG00000020428	Safb	100	87.261	Peromyscus_maniculatus_bairdii
ENSODEG00000014838	SAFB	57	79.482	ENSPCIG00000009504	-	100	79.482	Phascolarctos_cinereus
ENSODEG00000014838	SAFB	88	40.047	ENSPFOG00000007745	safb	72	39.320	Poecilia_formosa
ENSODEG00000014838	SAFB	94	37.732	ENSPLAG00000001614	safb	66	39.073	Poecilia_latipinna
ENSODEG00000014838	SAFB	72	44.512	ENSPMEG00000021023	safb	51	52.869	Poecilia_mexicana
ENSODEG00000014838	SAFB	71	44.737	ENSPREG00000012496	safb	50	53.279	Poecilia_reticulata
ENSODEG00000014838	SAFB	100	90.502	ENSPPYG00000009428	SAFB	100	90.502	Pongo_abelii
ENSODEG00000014838	SAFB	100	84.295	ENSPCAG00000006475	SAFB	100	84.615	Procavia_capensis
ENSODEG00000014838	SAFB	100	82.553	ENSPCOG00000014090	SAFB	100	79.723	Propithecus_coquereli
ENSODEG00000014838	SAFB	100	82.497	ENSPVAG00000004913	SAFB	100	82.818	Pteropus_vampyrus
ENSODEG00000014838	SAFB	72	60.656	ENSPNAG00000021838	safb	64	43.109	Pygocentrus_nattereri
ENSODEG00000014838	SAFB	100	86.850	ENSRNOG00000050543	Safb	100	86.957	Rattus_norvegicus
ENSODEG00000014838	SAFB	96	82.979	ENSRBIG00000042509	SAFB	88	96.774	Rhinopithecus_bieti
ENSODEG00000014838	SAFB	100	90.405	ENSRROG00000029278	SAFB	100	90.299	Rhinopithecus_roxellana
ENSODEG00000014838	SAFB	100	90.395	ENSSBOG00000026291	SAFB	100	90.395	Saimiri_boliviensis_boliviensis
ENSODEG00000014838	SAFB	96	43.730	ENSSFOG00015008156	safb	65	44.849	Scleropages_formosus
ENSODEG00000014838	SAFB	95	40.968	ENSSDUG00000009652	safb	56	50.804	Seriola_dumerili
ENSODEG00000014838	SAFB	93	83.200	ENSSARG00000010475	SAFB	100	83.086	Sorex_araneus
ENSODEG00000014838	SAFB	58	56.044	ENSSPUG00000009747	-	67	55.963	Sphenodon_punctatus
ENSODEG00000014838	SAFB	53	54.953	ENSSPUG00000009820	-	64	56.425	Sphenodon_punctatus
ENSODEG00000014838	SAFB	64	54.291	ENSSPAG00000015682	safb	56	59.184	Stegastes_partitus
ENSODEG00000014838	SAFB	100	89.768	ENSSSCG00000013522	SAFB	99	90.464	Sus_scrofa
ENSODEG00000014838	SAFB	96	62.198	ENSTGUG00000000502	-	97	63.122	Taeniopygia_guttata
ENSODEG00000014838	SAFB	93	61.006	ENSTGUG00000000489	-	68	61.238	Taeniopygia_guttata
ENSODEG00000014838	SAFB	90	41.272	ENSTRUG00000003567	safb	64	41.071	Takifugu_rubripes
ENSODEG00000014838	SAFB	88	44.537	ENSTNIG00000015470	safb	73	40.382	Tetraodon_nigroviridis
ENSODEG00000014838	SAFB	75	86.364	ENSTBEG00000013124	-	74	90.909	Tupaia_belangeri
ENSODEG00000014838	SAFB	92	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSODEG00000014838	SAFB	80	86.675	ENSUAMG00000024543	SAFB	100	83.106	Ursus_americanus
ENSODEG00000014838	SAFB	89	88.095	ENSUMAG00000009734	SAFB	96	89.839	Ursus_maritimus
ENSODEG00000014838	SAFB	71	94.531	ENSVPAG00000012043	SAFB	79	94.531	Vicugna_pacos
ENSODEG00000014838	SAFB	100	91.035	ENSVVUG00000013720	SAFB	87	91.035	Vulpes_vulpes
ENSODEG00000014838	SAFB	66	48.636	ENSXETG00000008755	safb	64	68.182	Xenopus_tropicalis