EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015373 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 59839 bases
Position: chrJH651517.1:19818362-19878200
Accession: 101587733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000020850	HRDC	PF00570.23	3e-13	1	1
ENSODEP00000020850	BDHCT	PF08072.11	1.6e-18	1	1
ENSODEP00000020850	DEAD	PF00270.29	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021107	BLM-201	3030	XM_004623471	ENSODEP00000020850	1009 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015373	BLM	52	36.449	ENSODEG00000010240	RECQL	85	36.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015373	BLM	100	79.079	ENSG00000197299	BLM	74	79.079	Homo_sapiens
ENSODEG00000015373	BLM	80	57.348	ENSAPOG00000017966	blm	62	57.348	Acanthochromis_polyacanthus
ENSODEG00000015373	BLM	100	78.128	ENSAMEG00000013843	BLM	74	78.128	Ailuropoda_melanoleuca
ENSODEG00000015373	BLM	80	57.692	ENSACIG00000023762	blm	73	50.763	Amphilophus_citrinellus
ENSODEG00000015373	BLM	99	50.281	ENSAOCG00000003318	blm	76	50.094	Amphiprion_ocellaris
ENSODEG00000015373	BLM	99	50.375	ENSAPEG00000018105	blm	74	50.140	Amphiprion_percula
ENSODEG00000015373	BLM	75	61.196	ENSATEG00000006421	blm	57	61.323	Anabas_testudineus
ENSODEG00000015373	BLM	99	56.140	ENSAPLG00000006878	BLM	90	55.907	Anas_platyrhynchos
ENSODEG00000015373	BLM	99	54.827	ENSACAG00000014275	BLM	74	54.757	Anolis_carolinensis
ENSODEG00000015373	BLM	100	78.866	ENSANAG00000038415	BLM	73	78.866	Aotus_nancymaae
ENSODEG00000015373	BLM	80	58.293	ENSACLG00000020354	blm	59	58.393	Astatotilapia_calliptera
ENSODEG00000015373	BLM	74	60.746	ENSAMXG00000016970	blm	59	58.068	Astyanax_mexicanus
ENSODEG00000015373	BLM	93	79.934	ENSBTAG00000020301	BLM	72	80.399	Bos_taurus
ENSODEG00000015373	BLM	60	38.626	WBGene00001865	him-6	66	38.626	Caenorhabditis_elegans
ENSODEG00000015373	BLM	100	78.695	ENSCJAG00000009803	BLM	74	78.695	Callithrix_jacchus
ENSODEG00000015373	BLM	100	77.255	ENSCAFG00000012385	BLM	74	77.255	Canis_familiaris
ENSODEG00000015373	BLM	100	77.255	ENSCAFG00020016111	BLM	88	83.402	Canis_lupus_dingo
ENSODEG00000015373	BLM	100	76.510	ENSCHIG00000010329	BLM	72	80.399	Capra_hircus
ENSODEG00000015373	BLM	100	78.407	ENSTSYG00000012368	BLM	74	78.407	Carlito_syrichta
ENSODEG00000015373	BLM	85	93.750	ENSCAPG00000017976	BLM	72	93.750	Cavia_aperea
ENSODEG00000015373	BLM	100	84.913	ENSCPOG00000001761	BLM	74	84.913	Cavia_porcellus
ENSODEG00000015373	BLM	100	78.311	ENSCCAG00000023069	BLM	74	78.311	Cebus_capucinus
ENSODEG00000015373	BLM	100	78.023	ENSCATG00000040609	BLM	92	85.445	Cercocebus_atys
ENSODEG00000015373	BLM	100	86.364	ENSCLAG00000012111	BLM	74	86.364	Chinchilla_lanigera
ENSODEG00000015373	BLM	100	78.215	ENSCSAG00000017040	BLM	73	78.215	Chlorocebus_sabaeus
ENSODEG00000015373	BLM	86	82.770	ENSCHOG00000006255	BLM	65	82.770	Choloepus_hoffmanni
ENSODEG00000015373	BLM	99	57.357	ENSCPBG00000025000	BLM	95	56.221	Chrysemys_picta_bellii
ENSODEG00000015373	BLM	57	34.122	ENSCSAVG00000007521	-	89	36.106	Ciona_savignyi
ENSODEG00000015373	BLM	83	73.709	ENSCANG00000034808	BLM	67	74.648	Colobus_angolensis_palliatus
ENSODEG00000015373	BLM	100	78.352	ENSCGRG00001024897	Blm	74	78.257	Cricetulus_griseus_chok1gshd
ENSODEG00000015373	BLM	56	77.969	ENSCGRG00000016261	Blm	59	77.797	Cricetulus_griseus_crigri
ENSODEG00000015373	BLM	75	60.178	ENSCSEG00000013483	blm	60	60.281	Cynoglossus_semilaevis
ENSODEG00000015373	BLM	75	61.083	ENSDARG00000077089	blm	56	61.587	Danio_rerio
ENSODEG00000015373	BLM	99	74.737	ENSDNOG00000010159	BLM	74	75.024	Dasypus_novemcinctus
ENSODEG00000015373	BLM	100	75.096	ENSDORG00000011033	Blm	100	75.192	Dipodomys_ordii
ENSODEG00000015373	BLM	68	39.891	FBgn0002906	Blm	51	38.776	Drosophila_melanogaster
ENSODEG00000015373	BLM	87	58.527	ENSETEG00000015019	BLM	63	58.527	Echinops_telfairi
ENSODEG00000015373	BLM	56	54.469	ENSEBUG00000015743	-	99	46.364	Eptatretus_burgeri
ENSODEG00000015373	BLM	100	74.952	ENSEASG00005006727	BLM	74	74.209	Equus_asinus_asinus
ENSODEG00000015373	BLM	100	77.630	ENSECAG00000011405	BLM	74	77.630	Equus_caballus
ENSODEG00000015373	BLM	99	74.760	ENSEEUG00000001434	BLM	75	74.760	Erinaceus_europaeus
ENSODEG00000015373	BLM	75	61.083	ENSELUG00000019098	blm	54	61.335	Esox_lucius
ENSODEG00000015373	BLM	100	78.236	ENSFCAG00000006087	BLM	74	78.236	Felis_catus
ENSODEG00000015373	BLM	87	61.414	ENSFALG00000010981	BLM	67	64.968	Ficedula_albicollis
ENSODEG00000015373	BLM	100	75.312	ENSFDAG00000012658	BLM	72	75.216	Fukomys_damarensis
ENSODEG00000015373	BLM	99	50.190	ENSFHEG00000002553	blm	75	51.287	Fundulus_heteroclitus
ENSODEG00000015373	BLM	100	49.623	ENSGMOG00000016431	blm	90	56.853	Gadus_morhua
ENSODEG00000015373	BLM	99	55.790	ENSGALG00000008256	BLM	77	55.678	Gallus_gallus
ENSODEG00000015373	BLM	80	56.954	ENSGAFG00000001117	blm	78	50.716	Gambusia_affinis
ENSODEG00000015373	BLM	75	60.332	ENSGACG00000010863	blm	100	67.675	Gasterosteus_aculeatus
ENSODEG00000015373	BLM	85	59.324	ENSGAGG00000005383	BLM	93	59.061	Gopherus_agassizii
ENSODEG00000015373	BLM	100	78.983	ENSGGOG00000007710	BLM	92	85.523	Gorilla_gorilla
ENSODEG00000015373	BLM	80	58.293	ENSHBUG00000015943	blm	60	58.443	Haplochromis_burtoni
ENSODEG00000015373	BLM	100	84.139	ENSHGLG00000013231	BLM	73	84.043	Heterocephalus_glaber_female
ENSODEG00000015373	BLM	99	51.916	ENSHCOG00000011455	blm	99	51.538	Hippocampus_comes
ENSODEG00000015373	BLM	99	51.538	ENSIPUG00000000529	blm	68	60.255	Ictalurus_punctatus
ENSODEG00000015373	BLM	100	77.447	ENSSTOG00000005000	BLM	73	77.447	Ictidomys_tridecemlineatus
ENSODEG00000015373	BLM	91	81.333	ENSJJAG00000016322	Blm	95	81.333	Jaculus_jaculus
ENSODEG00000015373	BLM	84	56.335	ENSKMAG00000016608	blm	56	60.914	Kryptolebias_marmoratus
ENSODEG00000015373	BLM	67	62.446	ENSLBEG00000018729	blm	81	62.446	Labrus_bergylta
ENSODEG00000015373	BLM	80	62.924	ENSLACG00000006490	BLM	73	56.157	Latimeria_chalumnae
ENSODEG00000015373	BLM	99	50.885	ENSLOCG00000014302	blm	76	51.308	Lepisosteus_oculatus
ENSODEG00000015373	BLM	100	78.215	ENSMFAG00000042982	BLM	92	85.714	Macaca_fascicularis
ENSODEG00000015373	BLM	100	78.311	ENSMMUG00000019526	BLM	92	85.714	Macaca_mulatta
ENSODEG00000015373	BLM	100	78.215	ENSMNEG00000031251	BLM	92	85.445	Macaca_nemestrina
ENSODEG00000015373	BLM	100	74.856	ENSMLEG00000032934	BLM	73	74.856	Mandrillus_leucophaeus
ENSODEG00000015373	BLM	75	60.963	ENSMAMG00000008726	blm	76	51.643	Mastacembelus_armatus
ENSODEG00000015373	BLM	80	58.173	ENSMZEG00005022323	blm	59	58.173	Maylandia_zebra
ENSODEG00000015373	BLM	56	61.785	ENSMGAG00000010473	BLM	99	61.616	Meleagris_gallopavo
ENSODEG00000015373	BLM	100	77.682	ENSMAUG00000008953	Blm	74	77.586	Mesocricetus_auratus
ENSODEG00000015373	BLM	100	77.895	ENSMICG00000034442	BLM	74	77.799	Microcebus_murinus
ENSODEG00000015373	BLM	100	77.703	ENSMOCG00000016367	Blm	73	77.606	Microtus_ochrogaster
ENSODEG00000015373	BLM	99	51.662	ENSMMOG00000006959	blm	76	51.662	Mola_mola
ENSODEG00000015373	BLM	99	65.863	ENSMODG00000019449	BLM	74	66.141	Monodelphis_domestica
ENSODEG00000015373	BLM	75	61.090	ENSMALG00000007323	blm	57	61.090	Monopterus_albus
ENSODEG00000015373	BLM	100	76.960	MGP_CAROLIEiJ_G0029907	Blm	73	76.894	Mus_caroli
ENSODEG00000015373	BLM	100	76.527	ENSMUSG00000030528	Blm	73	76.555	Mus_musculus
ENSODEG00000015373	BLM	100	76.577	MGP_PahariEiJ_G0013129	Blm	73	76.577	Mus_pahari
ENSODEG00000015373	BLM	100	76.724	MGP_SPRETEiJ_G0031009	Blm	73	76.628	Mus_spretus
ENSODEG00000015373	BLM	78	75.663	ENSMPUG00000015657	BLM	68	75.663	Mustela_putorius_furo
ENSODEG00000015373	BLM	100	76.004	ENSMLUG00000014697	BLM	74	76.004	Myotis_lucifugus
ENSODEG00000015373	BLM	100	79.482	ENSNGAG00000001275	Blm	74	79.386	Nannospalax_galili
ENSODEG00000015373	BLM	81	57.701	ENSNBRG00000019702	blm	59	58.173	Neolamprologus_brichardi
ENSODEG00000015373	BLM	100	76.679	ENSNLEG00000012087	BLM	100	75.000	Nomascus_leucogenys
ENSODEG00000015373	BLM	99	62.149	ENSMEUG00000007253	BLM	72	62.246	Notamacropus_eugenii
ENSODEG00000015373	BLM	93	80.360	ENSOPRG00000011667	BLM	68	80.360	Ochotona_princeps
ENSODEG00000015373	BLM	80	58.038	ENSONIG00000015193	blm	59	58.392	Oreochromis_niloticus
ENSODEG00000015373	BLM	73	76.693	ENSOANG00000009316	-	99	76.693	Ornithorhynchus_anatinus
ENSODEG00000015373	BLM	99	74.302	ENSOCUG00000013969	BLM	73	74.302	Oryctolagus_cuniculus
ENSODEG00000015373	BLM	99	51.848	ENSORLG00000008110	blm	57	61.421	Oryzias_latipes
ENSODEG00000015373	BLM	99	51.607	ENSORLG00020004812	blm	57	61.168	Oryzias_latipes_hni
ENSODEG00000015373	BLM	99	51.887	ENSORLG00015018640	blm	78	60.969	Oryzias_latipes_hsok
ENSODEG00000015373	BLM	75	60.026	ENSOMEG00000023545	blm	57	60.433	Oryzias_melastigma
ENSODEG00000015373	BLM	100	72.291	ENSOGAG00000005708	BLM	74	72.291	Otolemur_garnettii
ENSODEG00000015373	BLM	100	75.781	ENSOARG00000012875	BLM	74	76.443	Ovis_aries
ENSODEG00000015373	BLM	100	78.599	ENSPPAG00000032173	BLM	74	78.599	Pan_paniscus
ENSODEG00000015373	BLM	100	78.332	ENSPPRG00000002471	BLM	74	78.332	Panthera_pardus
ENSODEG00000015373	BLM	100	77.895	ENSPTIG00000016168	BLM	74	77.895	Panthera_tigris_altaica
ENSODEG00000015373	BLM	100	78.407	ENSPTRG00000007460	BLM	74	78.407	Pan_troglodytes
ENSODEG00000015373	BLM	100	78.311	ENSPANG00000018572	BLM	92	85.714	Papio_anubis
ENSODEG00000015373	BLM	80	59.524	ENSPKIG00000008954	blm	59	59.689	Paramormyrops_kingsleyae
ENSODEG00000015373	BLM	53	70.714	ENSPSIG00000009792	BLM	99	70.714	Pelodiscus_sinensis
ENSODEG00000015373	BLM	70	62.759	ENSPMGG00000006629	blm	80	62.759	Periophthalmus_magnuspinnatus
ENSODEG00000015373	BLM	100	77.416	ENSPEMG00000017348	Blm	74	77.703	Peromyscus_maniculatus_bairdii
ENSODEG00000015373	BLM	63	57.508	ENSPMAG00000000445	blm	88	58.689	Petromyzon_marinus
ENSODEG00000015373	BLM	99	64.815	ENSPCIG00000006609	BLM	74	65.217	Phascolarctos_cinereus
ENSODEG00000015373	BLM	80	57.024	ENSPFOG00000005059	blm	74	50.812	Poecilia_formosa
ENSODEG00000015373	BLM	80	56.954	ENSPLAG00000017344	blm	74	50.956	Poecilia_latipinna
ENSODEG00000015373	BLM	80	56.835	ENSPMEG00000000321	blm	74	50.812	Poecilia_mexicana
ENSODEG00000015373	BLM	80	56.611	ENSPREG00000007715	blm	74	50.571	Poecilia_reticulata
ENSODEG00000015373	BLM	100	76.527	ENSPPYG00000006784	BLM	73	76.527	Pongo_abelii
ENSODEG00000015373	BLM	86	75.793	ENSPCAG00000008960	BLM	63	75.825	Procavia_capensis
ENSODEG00000015373	BLM	100	73.463	ENSPCOG00000000439	BLM	69	79.641	Propithecus_coquereli
ENSODEG00000015373	BLM	82	93.226	ENSPVAG00000011642	BLM	59	93.226	Pteropus_vampyrus
ENSODEG00000015373	BLM	80	46.514	ENSPNYG00000010956	blm	57	47.312	Pundamilia_nyererei
ENSODEG00000015373	BLM	82	58.782	ENSPNAG00000011714	blm	59	59.762	Pygocentrus_nattereri
ENSODEG00000015373	BLM	100	76.268	ENSRNOG00000011213	Blm	74	76.172	Rattus_norvegicus
ENSODEG00000015373	BLM	100	78.023	ENSRBIG00000029656	BLM	100	78.023	Rhinopithecus_bieti
ENSODEG00000015373	BLM	100	78.119	ENSRROG00000037871	BLM	92	84.906	Rhinopithecus_roxellana
ENSODEG00000015373	BLM	88	76.647	ENSSBOG00000030957	BLM	71	76.647	Saimiri_boliviensis_boliviensis
ENSODEG00000015373	BLM	99	66.478	ENSSHAG00000007988	BLM	75	66.793	Sarcophilus_harrisii
ENSODEG00000015373	BLM	75	59.772	ENSSFOG00015015462	blm	63	59.415	Scleropages_formosus
ENSODEG00000015373	BLM	99	50.758	ENSSMAG00000001120	blm	76	50.750	Scophthalmus_maximus
ENSODEG00000015373	BLM	99	51.117	ENSSDUG00000010955	blm	75	51.215	Seriola_dumerili
ENSODEG00000015373	BLM	99	50.936	ENSSLDG00000000634	blm	75	50.466	Seriola_lalandi_dorsalis
ENSODEG00000015373	BLM	97	77.322	ENSSARG00000006398	BLM	78	73.033	Sorex_araneus
ENSODEG00000015373	BLM	99	55.120	ENSSPUG00000000013	BLM	92	54.746	Sphenodon_punctatus
ENSODEG00000015373	BLM	80	57.895	ENSSPAG00000013999	blm	74	50.609	Stegastes_partitus
ENSODEG00000015373	BLM	100	77.018	ENSSSCG00000001816	BLM	73	77.873	Sus_scrofa
ENSODEG00000015373	BLM	99	49.586	ENSTGUG00000009959	-	93	49.449	Taeniopygia_guttata
ENSODEG00000015373	BLM	99	50.567	ENSTRUG00000019860	blm	76	50.518	Takifugu_rubripes
ENSODEG00000015373	BLM	99	51.154	ENSTNIG00000019246	blm	76	51.154	Tetraodon_nigroviridis
ENSODEG00000015373	BLM	74	74.291	ENSTBEG00000006706	BLM	55	74.291	Tupaia_belangeri
ENSODEG00000015373	BLM	100	77.661	ENSTTRG00000016386	BLM	74	78.332	Tursiops_truncatus
ENSODEG00000015373	BLM	100	78.469	ENSUMAG00000009105	BLM	97	84.038	Ursus_maritimus
ENSODEG00000015373	BLM	94	82.432	ENSVPAG00000000085	BLM	69	83.446	Vicugna_pacos
ENSODEG00000015373	BLM	100	76.209	ENSVVUG00000006402	BLM	72	79.012	Vulpes_vulpes
ENSODEG00000015373	BLM	99	55.070	ENSXETG00000007847	blm	54	66.880	Xenopus_tropicalis
ENSODEG00000015373	BLM	79	53.688	ENSXCOG00000020227	blm	73	47.954	Xiphophorus_couchianus
ENSODEG00000015373	BLM	80	56.595	ENSXMAG00000002951	blm	74	50.524	Xiphophorus_maculatus