EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015513 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 20832 bases
Position: chrJH651522.1:28348760-28369591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021048	RRM_1	PF00076.22	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021305	-	1437	-	ENSODEP00000021048	478 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015513	-	73	81.250	ENSODEG00000014024	-	86	81.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015513	-	99	71.186	ENSG00000179950	PUF60	98	73.964	Homo_sapiens
ENSODEG00000015513	-	98	61.612	ENSAPOG00000001713	puf60b	95	63.690	Acanthochromis_polyacanthus
ENSODEG00000015513	-	99	71.863	ENSAMEG00000006406	PUF60	90	73.904	Ailuropoda_melanoleuca
ENSODEG00000015513	-	97	59.481	ENSACIG00000003263	-	97	60.656	Amphilophus_citrinellus
ENSODEG00000015513	-	97	62.089	ENSACIG00000021705	puf60b	98	63.690	Amphilophus_citrinellus
ENSODEG00000015513	-	96	61.811	ENSAOCG00000015558	-	96	61.858	Amphiprion_ocellaris
ENSODEG00000015513	-	98	61.612	ENSAOCG00000005395	puf60b	98	63.690	Amphiprion_ocellaris
ENSODEG00000015513	-	98	57.977	ENSAPEG00000011923	puf60b	95	59.557	Amphiprion_percula
ENSODEG00000015513	-	96	52.724	ENSAPEG00000001836	-	95	54.435	Amphiprion_percula
ENSODEG00000015513	-	97	62.282	ENSATEG00000001730	puf60b	95	64.087	Anabas_testudineus
ENSODEG00000015513	-	98	60.425	ENSATEG00000006303	-	95	61.660	Anabas_testudineus
ENSODEG00000015513	-	96	71.567	ENSAPLG00000010150	PUF60	97	73.176	Anas_platyrhynchos
ENSODEG00000015513	-	96	70.385	ENSACAG00000001645	PUF60	94	72.157	Anolis_carolinensis
ENSODEG00000015513	-	99	71.132	ENSANAG00000018626	PUF60	98	73.767	Aotus_nancymaae
ENSODEG00000015513	-	97	62.089	ENSACLG00000004462	puf60b	98	63.690	Astatotilapia_calliptera
ENSODEG00000015513	-	97	56.038	ENSAMXG00000041030	puf60b	98	57.143	Astyanax_mexicanus
ENSODEG00000015513	-	99	58.879	ENSAMXG00000036570	puf60a	98	59.586	Astyanax_mexicanus
ENSODEG00000015513	-	99	71.563	ENSBTAG00000037493	PUF60	96	74.162	Bos_taurus
ENSODEG00000015513	-	64	39.200	WBGene00004389	rnp-6	68	37.229	Caenorhabditis_elegans
ENSODEG00000015513	-	99	71.186	ENSCJAG00000021485	PUF60	95	73.964	Callithrix_jacchus
ENSODEG00000015513	-	99	70.998	ENSCAFG00000001400	PUF60	90	73.767	Canis_familiaris
ENSODEG00000015513	-	99	71.375	ENSCAFG00020018754	PUF60	95	74.162	Canis_lupus_dingo
ENSODEG00000015513	-	99	71.563	ENSCHIG00000001618	PUF60	84	74.162	Capra_hircus
ENSODEG00000015513	-	99	71.375	ENSTSYG00000011912	PUF60	98	74.162	Carlito_syrichta
ENSODEG00000015513	-	99	66.168	ENSCPOG00000014613	PUF60	91	68.689	Cavia_porcellus
ENSODEG00000015513	-	99	71.483	ENSCCAG00000007744	PUF60	95	73.767	Cebus_capucinus
ENSODEG00000015513	-	99	71.186	ENSCATG00000035405	PUF60	95	73.964	Cercocebus_atys
ENSODEG00000015513	-	99	71.563	ENSCLAG00000009154	PUF60	89	74.359	Chinchilla_lanigera
ENSODEG00000015513	-	96	72.340	ENSCSAG00000008878	PUF60	98	73.964	Chlorocebus_sabaeus
ENSODEG00000015513	-	96	71.954	ENSCPBG00000005595	PUF60	95	73.570	Chrysemys_picta_bellii
ENSODEG00000015513	-	94	40.771	ENSCING00000008436	-	95	39.321	Ciona_intestinalis
ENSODEG00000015513	-	57	40.125	ENSCING00000002156	-	82	39.812	Ciona_intestinalis
ENSODEG00000015513	-	94	38.866	ENSCSAVG00000004765	-	97	37.815	Ciona_savignyi
ENSODEG00000015513	-	94	39.847	ENSCSAVG00000001385	-	100	43.491	Ciona_savignyi
ENSODEG00000015513	-	76	68.825	ENSCANG00000041843	PUF60	97	70.588	Colobus_angolensis_palliatus
ENSODEG00000015513	-	99	71.805	ENSCGRG00001017442	Puf60	89	74.162	Cricetulus_griseus_chok1gshd
ENSODEG00000015513	-	99	71.805	ENSCGRG00000003717	Puf60	98	69.424	Cricetulus_griseus_crigri
ENSODEG00000015513	-	97	61.776	ENSCSEG00000019887	puf60b	89	63.294	Cynoglossus_semilaevis
ENSODEG00000015513	-	97	54.386	ENSCSEG00000014845	-	87	55.578	Cynoglossus_semilaevis
ENSODEG00000015513	-	87	60.043	ENSCVAG00000001560	-	98	59.827	Cyprinodon_variegatus
ENSODEG00000015513	-	97	62.282	ENSCVAG00000009386	puf60b	98	63.889	Cyprinodon_variegatus
ENSODEG00000015513	-	95	62.941	ENSDARG00000032175	puf60a	97	64.188	Danio_rerio
ENSODEG00000015513	-	97	57.414	ENSDARG00000001241	puf60b	98	58.157	Danio_rerio
ENSODEG00000015513	-	86	67.028	ENSDNOG00000043278	PUF60	82	67.896	Dasypus_novemcinctus
ENSODEG00000015513	-	99	71.563	ENSDORG00000004585	Puf60	91	74.359	Dipodomys_ordii
ENSODEG00000015513	-	86	45.890	FBgn0028577	hfp	77	48.462	Drosophila_melanogaster
ENSODEG00000015513	-	95	46.935	ENSEBUG00000014291	puf60b	81	46.655	Eptatretus_burgeri
ENSODEG00000015513	-	94	51.800	ENSEBUG00000005470	-	88	50.600	Eptatretus_burgeri
ENSODEG00000015513	-	99	71.375	ENSEASG00005009695	PUF60	95	74.162	Equus_asinus_asinus
ENSODEG00000015513	-	99	71.429	ENSECAG00000024681	PUF60	94	74.162	Equus_caballus
ENSODEG00000015513	-	98	60.721	ENSELUG00000006507	puf60b	98	59.626	Esox_lucius
ENSODEG00000015513	-	98	61.597	ENSELUG00000018443	-	95	63.976	Esox_lucius
ENSODEG00000015513	-	99	71.375	ENSFCAG00000001045	PUF60	98	74.162	Felis_catus
ENSODEG00000015513	-	96	62.378	ENSFALG00000001136	PUF60	95	63.690	Ficedula_albicollis
ENSODEG00000015513	-	99	71.375	ENSFDAG00000017177	PUF60	89	74.162	Fukomys_damarensis
ENSODEG00000015513	-	92	59.592	ENSFHEG00000021687	PUF60	99	60.377	Fundulus_heteroclitus
ENSODEG00000015513	-	97	62.089	ENSFHEG00000020046	puf60b	98	63.690	Fundulus_heteroclitus
ENSODEG00000015513	-	97	56.548	ENSGMOG00000006392	puf60b	96	57.347	Gadus_morhua
ENSODEG00000015513	-	62	68.060	ENSGALG00000039901	PUF60	88	69.018	Gallus_gallus
ENSODEG00000015513	-	95	59.557	ENSGAFG00000004334	-	99	59.336	Gambusia_affinis
ENSODEG00000015513	-	97	62.089	ENSGAFG00000021040	puf60b	98	63.492	Gambusia_affinis
ENSODEG00000015513	-	95	52.767	ENSGACG00000001484	-	98	53.213	Gasterosteus_aculeatus
ENSODEG00000015513	-	97	55.470	ENSGACG00000004717	puf60b	95	55.686	Gasterosteus_aculeatus
ENSODEG00000015513	-	96	71.954	ENSGAGG00000013289	PUF60	89	73.570	Gopherus_agassizii
ENSODEG00000015513	-	99	71.186	ENSGGOG00000004646	PUF60	95	73.964	Gorilla_gorilla
ENSODEG00000015513	-	97	62.089	ENSHBUG00000015118	puf60b	98	63.690	Haplochromis_burtoni
ENSODEG00000015513	-	98	60.308	ENSHBUG00000009634	-	98	58.777	Haplochromis_burtoni
ENSODEG00000015513	-	99	71.375	ENSHGLG00000006111	PUF60	89	74.162	Heterocephalus_glaber_female
ENSODEG00000015513	-	99	71.375	ENSHGLG00100012362	PUF60	89	74.162	Heterocephalus_glaber_male
ENSODEG00000015513	-	95	50.103	ENSHCOG00000000378	-	94	49.592	Hippocampus_comes
ENSODEG00000015513	-	97	59.888	ENSHCOG00000015541	puf60b	97	60.994	Hippocampus_comes
ENSODEG00000015513	-	97	57.467	ENSIPUG00000004660	puf60b	98	58.984	Ictalurus_punctatus
ENSODEG00000015513	-	95	60.904	ENSIPUG00000002453	puf60a	97	62.008	Ictalurus_punctatus
ENSODEG00000015513	-	99	71.563	ENSSTOG00000025037	PUF60	90	74.359	Ictidomys_tridecemlineatus
ENSODEG00000015513	-	96	73.256	ENSJJAG00000001076	Puf60	90	74.359	Jaculus_jaculus
ENSODEG00000015513	-	95	60.000	ENSKMAG00000010106	-	96	60.239	Kryptolebias_marmoratus
ENSODEG00000015513	-	97	62.282	ENSKMAG00000016745	puf60b	98	63.889	Kryptolebias_marmoratus
ENSODEG00000015513	-	99	83.099	ENSLBEG00000012505	puf60b	97	83.099	Labrus_bergylta
ENSODEG00000015513	-	64	64.088	ENSLACG00000005456	PUF60	96	63.739	Latimeria_chalumnae
ENSODEG00000015513	-	95	66.341	ENSLOCG00000010106	puf60b	95	66.078	Lepisosteus_oculatus
ENSODEG00000015513	-	99	70.510	ENSLAFG00000022929	PUF60	91	73.176	Loxodonta_africana
ENSODEG00000015513	-	99	71.186	ENSMFAG00000043373	PUF60	95	73.964	Macaca_fascicularis
ENSODEG00000015513	-	99	71.186	ENSMMUG00000013558	PUF60	95	73.964	Macaca_mulatta
ENSODEG00000015513	-	99	71.186	ENSMNEG00000031099	PUF60	95	73.964	Macaca_nemestrina
ENSODEG00000015513	-	96	72.340	ENSMLEG00000040009	PUF60	98	73.964	Mandrillus_leucophaeus
ENSODEG00000015513	-	95	62.749	ENSMAMG00000019476	-	95	62.253	Mastacembelus_armatus
ENSODEG00000015513	-	98	60.681	ENSMAMG00000010394	puf60b	98	61.390	Mastacembelus_armatus
ENSODEG00000015513	-	98	60.308	ENSMZEG00005019425	-	95	61.736	Maylandia_zebra
ENSODEG00000015513	-	97	62.089	ENSMZEG00005018515	puf60b	98	63.690	Maylandia_zebra
ENSODEG00000015513	-	96	71.567	ENSMGAG00000013070	PUF60	95	73.176	Meleagris_gallopavo
ENSODEG00000015513	-	66	66.489	ENSMAUG00000014267	-	85	68.376	Mesocricetus_auratus
ENSODEG00000015513	-	92	64.549	ENSMAUG00000018549	-	95	64.503	Mesocricetus_auratus
ENSODEG00000015513	-	99	71.375	ENSMICG00000012226	PUF60	96	74.162	Microcebus_murinus
ENSODEG00000015513	-	99	71.992	ENSMOCG00000018780	Puf60	90	74.359	Microtus_ochrogaster
ENSODEG00000015513	-	97	54.420	ENSMMOG00000018059	-	99	59.048	Mola_mola
ENSODEG00000015513	-	97	62.620	ENSMMOG00000004217	puf60b	98	63.492	Mola_mola
ENSODEG00000015513	-	99	70.998	ENSMODG00000009161	PUF60	91	73.767	Monodelphis_domestica
ENSODEG00000015513	-	96	60.437	ENSMALG00000006797	puf60b	95	60.852	Monopterus_albus
ENSODEG00000015513	-	98	60.425	ENSMALG00000000200	-	95	60.913	Monopterus_albus
ENSODEG00000015513	-	96	73.062	MGP_CAROLIEiJ_G0019910	Puf60	89	74.162	Mus_caroli
ENSODEG00000015513	-	96	73.062	ENSMUSG00000002524	Puf60	89	74.162	Mus_musculus
ENSODEG00000015513	-	96	73.062	MGP_PahariEiJ_G0019920	Puf60	89	74.162	Mus_pahari
ENSODEG00000015513	-	96	73.062	MGP_SPRETEiJ_G0020812	Puf60	89	74.162	Mus_spretus
ENSODEG00000015513	-	99	71.186	ENSMPUG00000008137	PUF60	89	73.964	Mustela_putorius_furo
ENSODEG00000015513	-	95	67.323	ENSMLUG00000013032	-	95	68.047	Myotis_lucifugus
ENSODEG00000015513	-	99	71.186	ENSMLUG00000000238	-	90	73.964	Myotis_lucifugus
ENSODEG00000015513	-	96	73.256	ENSNGAG00000000712	Puf60	98	74.359	Nannospalax_galili
ENSODEG00000015513	-	98	60.618	ENSNBRG00000017223	-	95	62.055	Neolamprologus_brichardi
ENSODEG00000015513	-	77	58.473	ENSNBRG00000013047	puf60b	94	59.113	Neolamprologus_brichardi
ENSODEG00000015513	-	99	71.186	ENSNLEG00000002156	PUF60	95	73.964	Nomascus_leucogenys
ENSODEG00000015513	-	71	78.495	ENSOPRG00000002147	PUF60	69	78.495	Ochotona_princeps
ENSODEG00000015513	-	97	62.089	ENSONIG00000006247	puf60b	95	63.492	Oreochromis_niloticus
ENSODEG00000015513	-	98	60.501	ENSONIG00000014030	-	95	61.933	Oreochromis_niloticus
ENSODEG00000015513	-	93	63.425	ENSOANG00000006962	PUF60	94	63.771	Ornithorhynchus_anatinus
ENSODEG00000015513	-	94	58.383	ENSORLG00000028655	-	97	58.300	Oryzias_latipes
ENSODEG00000015513	-	97	61.896	ENSORLG00000012279	puf60b	98	63.095	Oryzias_latipes
ENSODEG00000015513	-	97	61.896	ENSORLG00020007333	puf60	98	63.095	Oryzias_latipes_hni
ENSODEG00000015513	-	94	58.847	ENSORLG00020018144	-	95	58.765	Oryzias_latipes_hni
ENSODEG00000015513	-	94	58.765	ENSORLG00015016833	-	95	58.283	Oryzias_latipes_hsok
ENSODEG00000015513	-	97	61.464	ENSORLG00015007718	puf60b	98	63.241	Oryzias_latipes_hsok
ENSODEG00000015513	-	94	60.200	ENSOMEG00000022185	-	95	60.521	Oryzias_melastigma
ENSODEG00000015513	-	97	60.302	ENSOMEG00000001643	puf60b	99	61.382	Oryzias_melastigma
ENSODEG00000015513	-	99	71.563	ENSOGAG00000006259	PUF60	90	74.359	Otolemur_garnettii
ENSODEG00000015513	-	96	72.852	ENSOARG00000016235	PUF60	95	72.709	Ovis_aries
ENSODEG00000015513	-	99	71.186	ENSPPAG00000029933	PUF60	95	73.964	Pan_paniscus
ENSODEG00000015513	-	99	71.375	ENSPPRG00000003257	PUF60	98	74.162	Panthera_pardus
ENSODEG00000015513	-	96	70.520	ENSPTIG00000009795	PUF60	96	71.906	Panthera_tigris_altaica
ENSODEG00000015513	-	99	70.998	ENSPTRG00000043963	-	95	73.767	Pan_troglodytes
ENSODEG00000015513	-	99	70.998	ENSPTRG00000020670	PUF60	95	73.767	Pan_troglodytes
ENSODEG00000015513	-	99	71.321	ENSPANG00000021936	PUF60	95	73.964	Papio_anubis
ENSODEG00000015513	-	96	64.717	ENSPKIG00000012204	puf60b	98	66.601	Paramormyrops_kingsleyae
ENSODEG00000015513	-	98	62.075	ENSPKIG00000004295	puf60a	97	64.717	Paramormyrops_kingsleyae
ENSODEG00000015513	-	96	71.567	ENSPSIG00000004679	PUF60	96	73.176	Pelodiscus_sinensis
ENSODEG00000015513	-	97	60.192	ENSPMGG00000013444	puf60b	97	62.130	Periophthalmus_magnuspinnatus
ENSODEG00000015513	-	99	71.992	ENSPEMG00000008820	Puf60	90	74.359	Peromyscus_maniculatus_bairdii
ENSODEG00000015513	-	96	72.868	ENSPCIG00000020270	PUF60	96	74.359	Phascolarctos_cinereus
ENSODEG00000015513	-	97	62.089	ENSPFOG00000019217	puf60b	96	60.317	Poecilia_formosa
ENSODEG00000015513	-	95	60.843	ENSPFOG00000011118	-	95	60.966	Poecilia_formosa
ENSODEG00000015513	-	97	62.089	ENSPLAG00000010754	puf60b	98	63.690	Poecilia_latipinna
ENSODEG00000015513	-	95	60.442	ENSPLAG00000017025	-	88	60.563	Poecilia_latipinna
ENSODEG00000015513	-	95	60.843	ENSPMEG00000009767	-	88	60.966	Poecilia_mexicana
ENSODEG00000015513	-	97	62.089	ENSPMEG00000000838	puf60b	98	63.690	Poecilia_mexicana
ENSODEG00000015513	-	97	60.829	ENSPREG00000005440	puf60b	98	61.866	Poecilia_reticulata
ENSODEG00000015513	-	76	67.626	ENSPPYG00000018951	-	93	69.363	Pongo_abelii
ENSODEG00000015513	-	76	69.065	ENSPCAG00000014837	PUF60	97	70.833	Procavia_capensis
ENSODEG00000015513	-	99	71.375	ENSPCOG00000027981	PUF60	96	74.162	Propithecus_coquereli
ENSODEG00000015513	-	94	76.863	ENSPVAG00000016167	PUF60	78	78.431	Pteropus_vampyrus
ENSODEG00000015513	-	98	60.308	ENSPNYG00000004273	-	95	61.736	Pundamilia_nyererei
ENSODEG00000015513	-	97	62.089	ENSPNYG00000002556	puf60b	98	63.690	Pundamilia_nyererei
ENSODEG00000015513	-	95	58.893	ENSPNAG00000019909	puf60a	96	59.684	Pygocentrus_nattereri
ENSODEG00000015513	-	98	55.556	ENSPNAG00000019415	puf60b	87	55.599	Pygocentrus_nattereri
ENSODEG00000015513	-	96	73.062	ENSRNOG00000009960	Puf60	90	74.162	Rattus_norvegicus
ENSODEG00000015513	-	99	71.186	ENSRBIG00000035274	PUF60	95	73.964	Rhinopithecus_bieti
ENSODEG00000015513	-	99	71.186	ENSRROG00000029360	PUF60	95	73.964	Rhinopithecus_roxellana
ENSODEG00000015513	-	96	73.581	ENSSBOG00000027089	PUF60	95	74.104	Saimiri_boliviensis_boliviensis
ENSODEG00000015513	-	88	69.520	ENSSHAG00000006668	PUF60	87	72.527	Sarcophilus_harrisii
ENSODEG00000015513	-	98	59.313	ENSSFOG00015019371	puf60a	98	64.329	Scleropages_formosus
ENSODEG00000015513	-	97	60.381	ENSSFOG00015019619	puf60b	99	63.878	Scleropages_formosus
ENSODEG00000015513	-	73	80.808	ENSSMAG00000016381	puf60b	70	80.808	Scophthalmus_maximus
ENSODEG00000015513	-	97	60.985	ENSSDUG00000009935	puf60b	99	62.245	Seriola_dumerili
ENSODEG00000015513	-	94	59.841	ENSSDUG00000007048	-	93	60.896	Seriola_dumerili
ENSODEG00000015513	-	99	61.437	ENSSLDG00000024011	puf60b	98	62.162	Seriola_lalandi_dorsalis
ENSODEG00000015513	-	97	59.231	ENSSLDG00000007366	-	97	59.570	Seriola_lalandi_dorsalis
ENSODEG00000015513	-	59	62.903	ENSSPUG00000013518	PUF60	84	63.279	Sphenodon_punctatus
ENSODEG00000015513	-	95	61.782	ENSSPAG00000020285	-	98	62.008	Stegastes_partitus
ENSODEG00000015513	-	98	60.374	ENSSPAG00000012144	puf60b	98	61.969	Stegastes_partitus
ENSODEG00000015513	-	96	72.674	ENSSSCG00000038800	PUF60	98	70.588	Sus_scrofa
ENSODEG00000015513	-	96	69.903	ENSTGUG00000012797	-	97	71.485	Taeniopygia_guttata
ENSODEG00000015513	-	95	58.835	ENSTRUG00000008843	-	97	56.607	Takifugu_rubripes
ENSODEG00000015513	-	99	60.190	ENSTRUG00000005420	puf60b	98	61.004	Takifugu_rubripes
ENSODEG00000015513	-	97	61.315	ENSTNIG00000013675	puf60b	96	62.698	Tetraodon_nigroviridis
ENSODEG00000015513	-	98	58.546	ENSTNIG00000003069	-	96	59.959	Tetraodon_nigroviridis
ENSODEG00000015513	-	50	65.424	ENSTBEG00000002751	-	96	65.385	Tupaia_belangeri
ENSODEG00000015513	-	63	64.392	ENSTBEG00000001899	-	100	64.897	Tupaia_belangeri
ENSODEG00000015513	-	96	72.481	ENSTTRG00000017088	PUF60	98	73.715	Tursiops_truncatus
ENSODEG00000015513	-	99	71.375	ENSUAMG00000024917	PUF60	95	74.162	Ursus_americanus
ENSODEG00000015513	-	99	68.939	ENSUMAG00000000272	PUF60	90	71.032	Ursus_maritimus
ENSODEG00000015513	-	99	71.375	ENSVVUG00000022527	PUF60	98	74.162	Vulpes_vulpes
ENSODEG00000015513	-	96	68.859	ENSXETG00000012469	puf60	95	70.217	Xenopus_tropicalis
ENSODEG00000015513	-	97	59.381	ENSXCOG00000012355	puf60b	98	60.317	Xiphophorus_couchianus
ENSODEG00000015513	-	97	62.089	ENSXMAG00000001862	puf60b	98	63.690	Xiphophorus_maculatus
ENSODEG00000015513	-	95	57.344	ENSXMAG00000010507	-	95	57.460	Xiphophorus_maculatus