EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 6396 bases
Position: chrJH651598.1:9626030-9632425
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	1	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	2	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	3	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	4	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	5	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	6	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	7	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	8	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	9	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	10	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	11	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	12	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	13	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	14	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	15	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	16	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	17	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	18	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	19	20
ENSODEP00000021088	zf-C2H2	PF00096.26	3.4e-128	20	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	1	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	2	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	3	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	4	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	5	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	6	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	7	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	8	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	9	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	10	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	11	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	12	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	13	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	14	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	15	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	16	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	17	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	18	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	19	20
ENSODEP00000021087	zf-C2H2	PF00096.26	1.1e-127	20	20
ENSODEP00000021088	zf-met	PF12874.7	1.7e-07	1	1
ENSODEP00000021087	zf-met	PF12874.7	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021346	-	2196	-	ENSODEP00000021088	731 (aa)	-	-
ENSODET00000021345	-	2301	-	ENSODEP00000021087	766 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015543	-	87	36.111	ENSODEG00000011185	ZNF784	72	35.849
ENSODEG00000015543	-	98	47.541	ENSODEG00000009193	ZNF112	79	47.541
ENSODEG00000015543	-	88	37.589	ENSODEG00000014451	MAZ	80	37.324
ENSODEG00000015543	-	91	52.364	ENSODEG00000014575	-	51	52.158
ENSODEG00000015543	-	85	47.541	ENSODEG00000009133	PRDM5	70	47.541
ENSODEG00000015543	-	91	35.412	ENSODEG00000020561	ZNF319	91	34.451
ENSODEG00000015543	-	96	35.092	ENSODEG00000013318	ZNF574	93	35.427
ENSODEG00000015543	-	95	51.157	ENSODEG00000008278	-	87	51.157
ENSODEG00000015543	-	91	49.844	ENSODEG00000002735	ZFP62	91	50.615
ENSODEG00000015543	-	88	40.741	ENSODEG00000003654	-	63	40.741
ENSODEG00000015543	-	91	39.815	ENSODEG00000002057	ZNF423	98	39.815
ENSODEG00000015543	-	99	48.000	ENSODEG00000016460	-	99	48.000
ENSODEG00000015543	-	99	55.782	ENSODEG00000009980	ZNF582	99	55.782
ENSODEG00000015543	-	87	42.991	ENSODEG00000007856	SNAI1	59	42.991
ENSODEG00000015543	-	96	42.857	ENSODEG00000005735	ZFP64	71	42.857
ENSODEG00000015543	-	88	37.415	ENSODEG00000006725	GTF3A	64	35.683
ENSODEG00000015543	-	91	58.725	ENSODEG00000017047	-	100	58.725
ENSODEG00000015543	-	99	59.677	ENSODEG00000005837	ZNF2	97	59.677
ENSODEG00000015543	-	91	52.326	ENSODEG00000008851	-	74	52.326
ENSODEG00000015543	-	99	53.374	ENSODEG00000009602	ZNF81	98	44.519
ENSODEG00000015543	-	99	56.322	ENSODEG00000014404	ZFP1	99	56.322
ENSODEG00000015543	-	91	40.104	ENSODEG00000012587	ZBTB16	53	40.104
ENSODEG00000015543	-	91	47.244	ENSODEG00000006410	-	99	47.244
ENSODEG00000015543	-	91	62.000	ENSODEG00000000805	-	100	62.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015543	-	92	89.435	ENSDNOG00000038073	-	84	89.435	Dasypus_novemcinctus
ENSODEG00000015543	-	99	87.260	ENSDORG00000026133	-	99	87.243	Dipodomys_ordii
ENSODEG00000015543	-	92	95.238	ENSFDAG00000010369	-	100	95.238	Fukomys_damarensis
ENSODEG00000015543	-	92	95.691	ENSHGLG00000014546	-	100	95.691	Heterocephalus_glaber_female
ENSODEG00000015543	-	92	95.691	ENSHGLG00100019290	-	100	95.691	Heterocephalus_glaber_male