EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015650 (Gene tree)
Gene ID: 101569688
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 9263 bases
Position: chrJH651668.1:6419924-6429186
Accession: 101569688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021258	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021517	-	654	-	ENSODEP00000021259	217 (aa)	-	-
ENSODET00000021516	-	701	XM_004642479	ENSODEP00000021258	223 (aa)	XP_004642536	UPI000333F35B

Gene Model

Click here to download ENSODEG00000015650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015650	-	63	37.838	ENSODEG00000011726	RAB33A	62	37.838
ENSODEG00000015650	-	73	32.544	ENSODEG00000000054	RAB22A	86	32.544
ENSODEG00000015650	-	65	34.839	ENSODEG00000002835	RAB7A	94	34.839
ENSODEG00000015650	-	85	32.821	ENSODEG00000011248	-	95	32.161
ENSODEG00000015650	-	84	34.694	ENSODEG00000002979	RAB33B	83	34.694
ENSODEG00000015650	-	74	36.686	ENSODEG00000002013	RAB14	77	36.686
ENSODEG00000015650	-	71	32.716	ENSODEG00000010443	-	80	32.716
ENSODEG00000015650	-	74	34.483	ENSODEG00000019004	RAB9A	86	34.483
ENSODEG00000015650	-	69	32.500	ENSODEG00000000520	RAB39B	75	32.500
ENSODEG00000015650	-	67	37.419	ENSODEG00000016878	-	71	37.419
ENSODEG00000015650	-	76	30.814	ENSODEG00000007219	RAB35	86	30.814
ENSODEG00000015650	-	66	31.447	ENSODEG00000002594	-	56	31.447
ENSODEG00000015650	-	54	34.711	ENSODEG00000012634	-	95	34.711
ENSODEG00000015650	-	67	37.179	ENSODEG00000017847	-	76	37.179
ENSODEG00000015650	-	67	35.294	ENSODEG00000017920	RAB5C	71	35.294
ENSODEG00000015650	-	76	34.463	ENSODEG00000003833	RAB30	86	34.463
ENSODEG00000015650	-	69	30.380	ENSODEG00000009908	RAB25	74	30.380
ENSODEG00000015650	-	51	39.130	ENSODEG00000003860	RAB5B	53	39.130
ENSODEG00000015650	-	67	33.987	ENSODEG00000016788	-	77	33.333
ENSODEG00000015650	-	67	33.333	ENSODEG00000001343	RAB2B	71	33.333
ENSODEG00000015650	-	65	38.255	ENSODEG00000004150	-	72	38.255
ENSODEG00000015650	-	83	30.319	ENSODEG00000005942	RAB6A	88	30.319
ENSODEG00000015650	-	65	30.000	ENSODEG00000018151	MRAS	77	31.056
ENSODEG00000015650	-	69	33.962	ENSODEG00000006414	RAB12	78	32.353
ENSODEG00000015650	-	51	38.261	ENSODEG00000000290	-	78	38.261
ENSODEG00000015650	-	69	36.478	ENSODEG00000011371	RAB11B	72	36.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015650	-	98	89.450	ENSG00000144134	RABL2A	100	92.105	Homo_sapiens
ENSODEG00000015650	-	98	89.450	ENSG00000079974	RABL2B	100	91.919	Homo_sapiens
ENSODEG00000015650	-	96	75.349	ENSAPOG00000023708	rabl2	96	75.349	Acanthochromis_polyacanthus
ENSODEG00000015650	-	100	85.463	ENSAMEG00000003173	-	100	85.463	Ailuropoda_melanoleuca
ENSODEG00000015650	-	91	75.490	ENSACIG00000000670	rabl2	92	75.490	Amphilophus_citrinellus
ENSODEG00000015650	-	96	75.814	ENSAOCG00000008069	rabl2	96	75.814	Amphiprion_ocellaris
ENSODEG00000015650	-	96	75.349	ENSAPEG00000003164	rabl2	96	75.349	Amphiprion_percula
ENSODEG00000015650	-	93	76.923	ENSATEG00000001111	rabl2	94	76.923	Anabas_testudineus
ENSODEG00000015650	-	74	86.585	ENSACAG00000000418	-	93	86.585	Anolis_carolinensis
ENSODEG00000015650	-	98	88.991	ENSANAG00000021001	-	95	88.991	Aotus_nancymaae
ENSODEG00000015650	-	92	77.073	ENSACLG00000025632	rabl2	92	77.073	Astatotilapia_calliptera
ENSODEG00000015650	-	96	77.934	ENSAMXG00000040611	rabl2	96	77.934	Astyanax_mexicanus
ENSODEG00000015650	-	91	89.655	ENSBTAG00000004876	RABL2B	96	86.239	Bos_taurus
ENSODEG00000015650	-	98	88.991	ENSCJAG00000018414	-	95	88.991	Callithrix_jacchus
ENSODEG00000015650	-	100	87.892	ENSCAFG00020006938	-	100	87.892	Canis_lupus_dingo
ENSODEG00000015650	-	96	83.408	ENSCHIG00000000591	-	97	83.857	Capra_hircus
ENSODEG00000015650	-	99	88.235	ENSTSYG00000004323	-	97	88.235	Carlito_syrichta
ENSODEG00000015650	-	99	93.243	ENSCPOG00000026899	-	99	93.243	Cavia_porcellus
ENSODEG00000015650	-	98	90.367	ENSCCAG00000025944	-	95	90.367	Cebus_capucinus
ENSODEG00000015650	-	98	88.073	ENSCATG00000034307	-	95	88.073	Cercocebus_atys
ENSODEG00000015650	-	100	95.067	ENSCLAG00000017218	-	100	95.067	Chinchilla_lanigera
ENSODEG00000015650	-	96	91.080	ENSCSAG00000004698	-	92	91.080	Chlorocebus_sabaeus
ENSODEG00000015650	-	93	83.173	ENSCPBG00000011715	-	92	83.173	Chrysemys_picta_bellii
ENSODEG00000015650	-	83	68.280	ENSCING00000004961	-	86	68.280	Ciona_intestinalis
ENSODEG00000015650	-	80	70.787	ENSCSAVG00000006042	-	86	70.787	Ciona_savignyi
ENSODEG00000015650	-	99	87.783	ENSCANG00000030879	-	97	87.783	Colobus_angolensis_palliatus
ENSODEG00000015650	-	100	87.892	ENSCGRG00001021894	Rabl2	100	87.892	Cricetulus_griseus_chok1gshd
ENSODEG00000015650	-	91	76.355	ENSCSEG00000005479	rabl2	93	75.481	Cynoglossus_semilaevis
ENSODEG00000015650	-	91	77.340	ENSCVAG00000011432	rabl2	93	77.340	Cyprinodon_variegatus
ENSODEG00000015650	-	89	78.392	ENSDARG00000063321	rabl2	91	78.392	Danio_rerio
ENSODEG00000015650	-	96	91.628	ENSDNOG00000035151	-	97	91.628	Dasypus_novemcinctus
ENSODEG00000015650	-	99	91.855	ENSDORG00000000003	Rabl2	99	91.855	Dipodomys_ordii
ENSODEG00000015650	-	100	86.996	ENSEASG00005008239	-	100	86.996	Equus_asinus_asinus
ENSODEG00000015650	-	100	86.996	ENSECAG00000026942	-	100	86.996	Equus_caballus
ENSODEG00000015650	-	100	89.238	ENSFCAG00000033642	-	100	89.238	Felis_catus
ENSODEG00000015650	-	98	94.037	ENSFDAG00000002113	-	98	94.037	Fukomys_damarensis
ENSODEG00000015650	-	93	76.923	ENSFHEG00000015015	rabl2	79	76.923	Fundulus_heteroclitus
ENSODEG00000015650	-	88	75.635	ENSGMOG00000018928	rabl2	100	75.635	Gadus_morhua
ENSODEG00000015650	-	97	78.704	ENSGALG00000032458	RABL2B	97	78.704	Gallus_gallus
ENSODEG00000015650	-	86	80.729	ENSGAFG00000005188	rabl2	89	79.899	Gambusia_affinis
ENSODEG00000015650	-	93	74.879	ENSGACG00000012474	rabl2	94	74.879	Gasterosteus_aculeatus
ENSODEG00000015650	-	92	77.073	ENSHBUG00000010964	rabl2	92	77.073	Haplochromis_burtoni
ENSODEG00000015650	-	100	92.377	ENSHGLG00000005750	-	100	92.377	Heterocephalus_glaber_female
ENSODEG00000015650	-	100	92.377	ENSHGLG00100016281	-	100	92.377	Heterocephalus_glaber_male
ENSODEG00000015650	-	100	91.480	ENSSTOG00000002723	-	100	91.480	Ictidomys_tridecemlineatus
ENSODEG00000015650	-	100	87.892	ENSJJAG00000010792	Rabl2	100	87.892	Jaculus_jaculus
ENSODEG00000015650	-	93	77.404	ENSKMAG00000012723	rabl2	93	77.404	Kryptolebias_marmoratus
ENSODEG00000015650	-	93	77.404	ENSLBEG00000003644	rabl2	93	77.404	Labrus_bergylta
ENSODEG00000015650	-	97	77.376	ENSLACG00000003722	rabl2	99	77.376	Latimeria_chalumnae
ENSODEG00000015650	-	99	76.577	ENSLOCG00000016767	rabl2	98	76.577	Lepisosteus_oculatus
ENSODEG00000015650	-	98	89.450	ENSMFAG00000044775	-	95	89.450	Macaca_fascicularis
ENSODEG00000015650	-	98	89.450	ENSMMUG00000022914	RABL2B	95	89.450	Macaca_mulatta
ENSODEG00000015650	-	98	88.991	ENSMNEG00000028460	-	95	88.991	Macaca_nemestrina
ENSODEG00000015650	-	98	88.073	ENSMLEG00000032621	-	95	88.073	Mandrillus_leucophaeus
ENSODEG00000015650	-	93	76.442	ENSMAMG00000008168	rabl2	93	76.442	Mastacembelus_armatus
ENSODEG00000015650	-	92	75.243	ENSMZEG00005019758	rabl2	95	75.243	Maylandia_zebra
ENSODEG00000015650	-	99	86.878	ENSMAUG00000010955	Rabl2	99	86.878	Mesocricetus_auratus
ENSODEG00000015650	-	99	91.403	ENSMICG00000031301	-	97	91.403	Microcebus_murinus
ENSODEG00000015650	-	99	86.878	ENSMOCG00000002775	Rabl2	99	86.878	Microtus_ochrogaster
ENSODEG00000015650	-	96	86.512	ENSMODG00000010838	-	98	86.512	Monodelphis_domestica
ENSODEG00000015650	-	93	76.923	ENSMALG00000005944	rabl2	93	76.923	Monopterus_albus
ENSODEG00000015650	-	100	84.753	MGP_CAROLIEiJ_G0020176	Rabl2	99	84.753	Mus_caroli
ENSODEG00000015650	-	100	85.202	ENSMUSG00000022621	Rabl2	100	85.202	Mus_musculus
ENSODEG00000015650	-	100	85.650	MGP_PahariEiJ_G0020181	Rabl2	100	85.650	Mus_pahari
ENSODEG00000015650	-	100	84.753	MGP_SPRETEiJ_G0021073	Rabl2	100	84.753	Mus_spretus
ENSODEG00000015650	-	96	89.767	ENSMPUG00000001806	-	96	89.767	Mustela_putorius_furo
ENSODEG00000015650	-	96	87.850	ENSNGAG00000012843	Rabl2	93	87.850	Nannospalax_galili
ENSODEG00000015650	-	92	77.073	ENSNBRG00000000489	rabl2	92	77.073	Neolamprologus_brichardi
ENSODEG00000015650	-	98	90.367	ENSNLEG00000030435	-	95	90.367	Nomascus_leucogenys
ENSODEG00000015650	-	92	77.561	ENSONIG00000014885	rabl2	92	77.561	Oreochromis_niloticus
ENSODEG00000015650	-	93	73.558	ENSORLG00000009874	rabl2	92	73.558	Oryzias_latipes
ENSODEG00000015650	-	93	73.558	ENSORLG00020001721	rabl2	92	73.558	Oryzias_latipes_hni
ENSODEG00000015650	-	93	73.558	ENSORLG00015014268	rabl2	92	73.558	Oryzias_latipes_hsok
ENSODEG00000015650	-	93	75.481	ENSOMEG00000008576	rabl2	96	75.481	Oryzias_melastigma
ENSODEG00000015650	-	99	91.855	ENSOGAG00000009123	-	97	91.855	Otolemur_garnettii
ENSODEG00000015650	-	98	88.182	ENSPPRG00000014642	-	96	88.182	Panthera_pardus
ENSODEG00000015650	-	100	89.238	ENSPTIG00000018747	-	100	89.238	Panthera_tigris_altaica
ENSODEG00000015650	-	96	84.889	ENSPTRG00000014555	-	95	84.889	Pan_troglodytes
ENSODEG00000015650	-	98	84.649	ENSPANG00000036121	-	95	84.649	Papio_anubis
ENSODEG00000015650	-	91	78.922	ENSPKIG00000025372	rabl2	91	78.922	Paramormyrops_kingsleyae
ENSODEG00000015650	-	93	85.096	ENSPSIG00000014041	-	92	85.096	Pelodiscus_sinensis
ENSODEG00000015650	-	88	75.635	ENSPMGG00000012946	rabl2	96	75.635	Periophthalmus_magnuspinnatus
ENSODEG00000015650	-	100	87.444	ENSPEMG00000024045	Rabl2	100	87.444	Peromyscus_maniculatus_bairdii
ENSODEG00000015650	-	93	85.581	ENSPCIG00000012436	-	88	85.581	Phascolarctos_cinereus
ENSODEG00000015650	-	91	79.412	ENSPFOG00000017960	rabl2	92	79.412	Poecilia_formosa
ENSODEG00000015650	-	91	80.198	ENSPLAG00000015685	rabl2	92	80.198	Poecilia_latipinna
ENSODEG00000015650	-	91	80.198	ENSPMEG00000004703	rabl2	92	80.198	Poecilia_mexicana
ENSODEG00000015650	-	84	81.383	ENSPREG00000014761	rabl2	93	81.283	Poecilia_reticulata
ENSODEG00000015650	-	98	89.908	ENSPPYG00000012000	-	95	89.908	Pongo_abelii
ENSODEG00000015650	-	99	91.855	ENSPCOG00000024865	-	97	91.855	Propithecus_coquereli
ENSODEG00000015650	-	96	84.141	ENSPVAG00000004539	-	95	84.141	Pteropus_vampyrus
ENSODEG00000015650	-	92	77.073	ENSPNYG00000004845	rabl2	92	77.073	Pundamilia_nyererei
ENSODEG00000015650	-	90	80.597	ENSPNAG00000024254	rabl2	96	77.934	Pygocentrus_nattereri
ENSODEG00000015650	-	96	89.252	ENSRNOG00000013947	Rabl2	86	89.252	Rattus_norvegicus
ENSODEG00000015650	-	99	89.140	ENSRBIG00000033607	-	97	89.140	Rhinopithecus_bieti
ENSODEG00000015650	-	99	88.688	ENSRROG00000031130	-	97	88.688	Rhinopithecus_roxellana
ENSODEG00000015650	-	99	90.045	ENSSBOG00000033266	-	97	90.045	Saimiri_boliviensis_boliviensis
ENSODEG00000015650	-	91	77.941	ENSSFOG00015020738	rabl2	95	76.303	Scleropages_formosus
ENSODEG00000015650	-	93	76.923	ENSSMAG00000004606	rabl2	93	76.923	Scophthalmus_maximus
ENSODEG00000015650	-	92	78.049	ENSSDUG00000014765	rabl2	92	78.049	Seriola_dumerili
ENSODEG00000015650	-	76	88.824	ENSSSCG00000025041	-	100	88.824	Sus_scrofa
ENSODEG00000015650	-	88	79.695	ENSTGUG00000016028	-	95	79.695	Taeniopygia_guttata
ENSODEG00000015650	-	93	76.442	ENSTRUG00000012454	rabl2	93	76.442	Takifugu_rubripes
ENSODEG00000015650	-	93	75.962	ENSTNIG00000017951	rabl2	93	75.962	Tetraodon_nigroviridis
ENSODEG00000015650	-	96	84.579	ENSUAMG00000015761	-	96	84.579	Ursus_americanus
ENSODEG00000015650	-	100	87.892	ENSUMAG00000017116	-	100	87.892	Ursus_maritimus
ENSODEG00000015650	-	100	86.996	ENSVVUG00000025761	-	100	86.996	Vulpes_vulpes
ENSODEG00000015650	-	92	79.024	ENSXETG00000015712	rabl2b	91	79.024	Xenopus_tropicalis
ENSODEG00000015650	-	87	81.538	ENSXMAG00000004569	rabl2	89	80.905	Xiphophorus_maculatus