EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015832 (Gene tree)
Gene ID: 101586108
Gene Symbol: -
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 11163 bases
Position: chrJH651560.1:13459708-13470870
Accession: 101586108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021510	DcpS_C	PF11969.8	1.1e-32	1	1
ENSODEP00000021509	DcpS_C	PF11969.8	2.1e-32	1	1
ENSODEP00000021508	DcpS_C	PF11969.8	2.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021766	-	1059	-	ENSODEP00000021508	352 (aa)	-	-
ENSODET00000021767	-	999	XM_004631922	ENSODEP00000021509	332 (aa)	XP_004631979	-
ENSODET00000021768	-	723	XM_004631925	ENSODEP00000021510	240 (aa)	XP_004631982	-

Gene Model

Click here to download ENSODEG00000015832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015832	-	100	82.796	ENSODEG00000000097	-	100	82.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015832	-	100	87.390	ENSG00000137074	APTX	95	94.318	Homo_sapiens
ENSODEG00000015832	-	100	65.025	ENSAPOG00000008785	aptx	100	59.824	Acanthochromis_polyacanthus
ENSODEG00000015832	-	100	87.097	ENSAMEG00000007648	APTX	98	86.533	Ailuropoda_melanoleuca
ENSODEG00000015832	-	100	65.318	ENSACIG00000002035	aptx	100	56.587	Amphilophus_citrinellus
ENSODEG00000015832	-	100	64.851	ENSAOCG00000000634	aptx	100	60.479	Amphiprion_ocellaris
ENSODEG00000015832	-	100	64.851	ENSAPEG00000017253	aptx	100	60.479	Amphiprion_percula
ENSODEG00000015832	-	100	63.492	ENSATEG00000017383	aptx	100	58.824	Anabas_testudineus
ENSODEG00000015832	-	89	65.116	ENSAPLG00000015645	APTX	99	61.270	Anas_platyrhynchos
ENSODEG00000015832	-	100	77.966	ENSACAG00000003581	APTX	95	62.099	Anolis_carolinensis
ENSODEG00000015832	-	100	90.761	ENSANAG00000030160	APTX	100	86.186	Aotus_nancymaae
ENSODEG00000015832	-	99	60.479	ENSACLG00000018887	aptx	100	60.479	Astatotilapia_calliptera
ENSODEG00000015832	-	99	70.492	ENSAMXG00000039899	aptx	99	56.805	Astyanax_mexicanus
ENSODEG00000015832	-	100	90.217	ENSBTAG00000013947	APTX	99	86.297	Bos_taurus
ENSODEG00000015832	-	100	89.674	ENSCJAG00000007940	APTX	100	87.172	Callithrix_jacchus
ENSODEG00000015832	-	100	89.674	ENSCAFG00000001812	APTX	100	87.719	Canis_familiaris
ENSODEG00000015832	-	100	89.674	ENSCAFG00020015598	APTX	100	87.719	Canis_lupus_dingo
ENSODEG00000015832	-	100	90.217	ENSCHIG00000012896	APTX	100	85.673	Capra_hircus
ENSODEG00000015832	-	100	90.217	ENSTSYG00000003041	APTX	100	89.181	Carlito_syrichta
ENSODEG00000015832	-	100	80.833	ENSCAPG00000013470	APTX	100	97.727	Cavia_aperea
ENSODEG00000015832	-	100	95.000	ENSCPOG00000005975	APTX	100	95.000	Cavia_porcellus
ENSODEG00000015832	-	100	89.674	ENSCCAG00000036783	APTX	100	87.172	Cebus_capucinus
ENSODEG00000015832	-	100	90.217	ENSCATG00000042639	APTX	98	87.608	Cercocebus_atys
ENSODEG00000015832	-	100	94.167	ENSCLAG00000012185	APTX	100	94.167	Chinchilla_lanigera
ENSODEG00000015832	-	100	90.761	ENSCSAG00000009885	APTX	96	88.921	Chlorocebus_sabaeus
ENSODEG00000015832	-	100	75.824	ENSCPBG00000023973	APTX	99	63.128	Chrysemys_picta_bellii
ENSODEG00000015832	-	96	48.214	ENSCING00000008741	-	94	39.612	Ciona_intestinalis
ENSODEG00000015832	-	97	51.445	ENSCSAVG00000008038	-	97	39.833	Ciona_savignyi
ENSODEG00000015832	-	100	89.091	ENSCANG00000037253	APTX	100	87.427	Colobus_angolensis_palliatus
ENSODEG00000015832	-	99	91.983	ENSCGRG00001000705	Aptx	99	91.983	Cricetulus_griseus_chok1gshd
ENSODEG00000015832	-	99	91.983	ENSCGRG00000014159	Aptx	99	91.983	Cricetulus_griseus_crigri
ENSODEG00000015832	-	99	67.797	ENSCSEG00000009549	aptx	99	59.036	Cynoglossus_semilaevis
ENSODEG00000015832	-	100	62.562	ENSCVAG00000011942	aptx	99	58.258	Cyprinodon_variegatus
ENSODEG00000015832	-	99	70.556	ENSDARG00000027143	aptx	99	58.485	Danio_rerio
ENSODEG00000015832	-	100	88.525	ENSDNOG00000018498	APTX	98	84.527	Dasypus_novemcinctus
ENSODEG00000015832	-	100	90.217	ENSDORG00000002139	Aptx	100	90.217	Dipodomys_ordii
ENSODEG00000015832	-	75	39.429	FBgn0038704	CG5316	87	45.902	Drosophila_melanogaster
ENSODEG00000015832	-	75	88.333	ENSETEG00000012459	APTX	78	82.014	Echinops_telfairi
ENSODEG00000015832	-	98	57.714	ENSEBUG00000013914	aptx	95	47.159	Eptatretus_burgeri
ENSODEG00000015832	-	99	90.000	ENSEASG00005004566	APTX	99	86.176	Equus_asinus_asinus
ENSODEG00000015832	-	99	90.659	ENSECAG00000012674	APTX	92	86.217	Equus_caballus
ENSODEG00000015832	-	79	92.481	ENSEEUG00000010693	APTX	96	83.618	Erinaceus_europaeus
ENSODEG00000015832	-	100	91.525	ENSFCAG00000008728	APTX	100	87.719	Felis_catus
ENSODEG00000015832	-	100	73.224	ENSFALG00000001230	APTX	100	63.584	Ficedula_albicollis
ENSODEG00000015832	-	100	92.500	ENSFDAG00000013752	APTX	100	92.500	Fukomys_damarensis
ENSODEG00000015832	-	75	69.061	ENSFHEG00000021328	aptx	73	54.861	Fundulus_heteroclitus
ENSODEG00000015832	-	99	67.222	ENSGMOG00000012505	aptx	99	56.970	Gadus_morhua
ENSODEG00000015832	-	100	73.224	ENSGALG00000001954	APTX	100	60.511	Gallus_gallus
ENSODEG00000015832	-	100	68.681	ENSGAFG00000005086	aptx	100	58.407	Gambusia_affinis
ENSODEG00000015832	-	99	63.507	ENSGACG00000017887	aptx	99	60.000	Gasterosteus_aculeatus
ENSODEG00000015832	-	100	75.824	ENSGAGG00000013230	APTX	100	63.662	Gopherus_agassizii
ENSODEG00000015832	-	79	93.284	ENSGGOG00000014232	APTX	89	88.396	Gorilla_gorilla
ENSODEG00000015832	-	99	60.479	ENSHBUG00000021058	aptx	100	60.479	Haplochromis_burtoni
ENSODEG00000015832	-	100	92.500	ENSHGLG00000015093	APTX	100	92.500	Heterocephalus_glaber_female
ENSODEG00000015832	-	100	92.500	ENSHGLG00100013482	APTX	100	92.500	Heterocephalus_glaber_male
ENSODEG00000015832	-	99	66.842	ENSHCOG00000018216	aptx	96	59.091	Hippocampus_comes
ENSODEG00000015832	-	99	72.222	ENSIPUG00000017548	aptx	99	58.929	Ictalurus_punctatus
ENSODEG00000015832	-	100	91.250	ENSSTOG00000005185	APTX	100	91.250	Ictidomys_tridecemlineatus
ENSODEG00000015832	-	97	89.617	ENSJJAG00000015653	Aptx	100	81.081	Jaculus_jaculus
ENSODEG00000015832	-	100	64.407	ENSKMAG00000000117	aptx	100	58.683	Kryptolebias_marmoratus
ENSODEG00000015832	-	99	61.905	ENSLBEG00000015353	aptx	99	58.721	Labrus_bergylta
ENSODEG00000015832	-	99	62.500	ENSLBEG00000021489	APTX	99	52.809	Labrus_bergylta
ENSODEG00000015832	-	99	73.889	ENSLACG00000003376	APTX	99	60.227	Latimeria_chalumnae
ENSODEG00000015832	-	100	70.984	ENSLOCG00000011556	aptx	95	60.997	Lepisosteus_oculatus
ENSODEG00000015832	-	100	86.804	ENSLAFG00000005665	APTX	99	87.755	Loxodonta_africana
ENSODEG00000015832	-	99	91.257	ENSMFAG00000043141	APTX	98	88.150	Macaca_fascicularis
ENSODEG00000015832	-	100	90.761	ENSMMUG00000007724	APTX	98	87.896	Macaca_mulatta
ENSODEG00000015832	-	100	90.217	ENSMNEG00000042341	APTX	100	88.596	Macaca_nemestrina
ENSODEG00000015832	-	100	90.217	ENSMLEG00000035137	APTX	100	88.304	Mandrillus_leucophaeus
ENSODEG00000015832	-	100	65.079	ENSMAMG00000018377	aptx	100	59.159	Mastacembelus_armatus
ENSODEG00000015832	-	99	60.455	ENSMZEG00005022621	aptx	100	60.180	Maylandia_zebra
ENSODEG00000015832	-	75	72.928	ENSMGAG00000005736	APTX	100	72.928	Meleagris_gallopavo
ENSODEG00000015832	-	99	90.295	ENSMAUG00000006039	Aptx	99	90.295	Mesocricetus_auratus
ENSODEG00000015832	-	100	90.761	ENSMICG00000006603	APTX	97	89.443	Microcebus_murinus
ENSODEG00000015832	-	99	90.756	ENSMOCG00000000869	Aptx	99	90.756	Microtus_ochrogaster
ENSODEG00000015832	-	99	74.444	ENSMMOG00000007028	aptx	99	62.018	Mola_mola
ENSODEG00000015832	-	99	63.388	ENSMODG00000003365	APTX	100	62.000	Monodelphis_domestica
ENSODEG00000015832	-	100	54.464	ENSMALG00000003828	aptx	68	88.095	Monopterus_albus
ENSODEG00000015832	-	99	90.756	MGP_CAROLIEiJ_G0025897	-	99	90.756	Mus_caroli
ENSODEG00000015832	-	99	91.176	ENSMUSG00000028411	Aptx	99	91.176	Mus_musculus
ENSODEG00000015832	-	99	87.912	MGP_PahariEiJ_G0024020	Aptx	99	81.711	Mus_pahari
ENSODEG00000015832	-	99	89.560	MGP_SPRETEiJ_G0026846	Aptx	97	82.006	Mus_spretus
ENSODEG00000015832	-	100	88.710	ENSMPUG00000004290	APTX	100	87.427	Mustela_putorius_furo
ENSODEG00000015832	-	100	88.482	ENSMLUG00000016081	APTX	95	87.172	Myotis_lucifugus
ENSODEG00000015832	-	100	88.333	ENSNGAG00000016314	Aptx	100	88.333	Nannospalax_galili
ENSODEG00000015832	-	99	60.000	ENSNBRG00000014199	aptx	100	59.880	Neolamprologus_brichardi
ENSODEG00000015832	-	100	90.217	ENSNLEG00000032184	APTX	100	89.181	Nomascus_leucogenys
ENSODEG00000015832	-	99	72.131	ENSMEUG00000004153	APTX	99	62.209	Notamacropus_eugenii
ENSODEG00000015832	-	79	89.091	ENSOPRG00000012403	APTX	95	81.164	Ochotona_princeps
ENSODEG00000015832	-	100	62.069	ENSONIG00000014541	aptx	83	59.581	Oreochromis_niloticus
ENSODEG00000015832	-	79	78.261	ENSOANG00000009878	APTX	98	61.639	Ornithorhynchus_anatinus
ENSODEG00000015832	-	99	92.050	ENSOCUG00000025059	-	92	92.050	Oryctolagus_cuniculus
ENSODEG00000015832	-	99	91.257	ENSOCUG00000000738	-	99	89.003	Oryctolagus_cuniculus
ENSODEG00000015832	-	100	69.101	ENSORLG00000006237	aptx	100	56.677	Oryzias_latipes
ENSODEG00000015832	-	100	69.101	ENSORLG00020021478	aptx	100	57.658	Oryzias_latipes_hni
ENSODEG00000015832	-	100	69.832	ENSORLG00015021873	aptx	100	57.057	Oryzias_latipes_hsok
ENSODEG00000015832	-	97	50.725	ENSOMEG00000007875	aptx	93	51.156	Oryzias_melastigma
ENSODEG00000015832	-	100	88.587	ENSOGAG00000005388	APTX	96	87.135	Otolemur_garnettii
ENSODEG00000015832	-	100	90.217	ENSOARG00000009598	APTX	98	84.770	Ovis_aries
ENSODEG00000015832	-	100	90.761	ENSPPAG00000030295	APTX	98	87.896	Pan_paniscus
ENSODEG00000015832	-	100	89.130	ENSPPRG00000017524	APTX	100	88.012	Panthera_pardus
ENSODEG00000015832	-	100	89.130	ENSPTIG00000020000	APTX	100	88.012	Panthera_tigris_altaica
ENSODEG00000015832	-	100	90.761	ENSPTRG00000020850	APTX	100	88.889	Pan_troglodytes
ENSODEG00000015832	-	100	90.217	ENSPANG00000025301	APTX	98	87.608	Papio_anubis
ENSODEG00000015832	-	99	71.271	ENSPKIG00000013601	aptx	99	58.908	Paramormyrops_kingsleyae
ENSODEG00000015832	-	100	75.543	ENSPSIG00000010521	APTX	94	75.543	Pelodiscus_sinensis
ENSODEG00000015832	-	98	71.186	ENSPMGG00000018649	aptx	99	57.059	Periophthalmus_magnuspinnatus
ENSODEG00000015832	-	99	90.336	ENSPEMG00000007747	Aptx	99	90.336	Peromyscus_maniculatus_bairdii
ENSODEG00000015832	-	98	54.190	ENSPMAG00000008417	aptx	97	45.322	Petromyzon_marinus
ENSODEG00000015832	-	100	72.678	ENSPCIG00000029852	APTX	100	66.952	Phascolarctos_cinereus
ENSODEG00000015832	-	100	58.258	ENSPFOG00000004992	aptx	100	58.112	Poecilia_formosa
ENSODEG00000015832	-	100	58.559	ENSPFOG00000005131	-	99	58.407	Poecilia_formosa
ENSODEG00000015832	-	100	58.559	ENSPLAG00000007960	APTX	100	58.407	Poecilia_latipinna
ENSODEG00000015832	-	100	58.559	ENSPLAG00000007906	aptx	100	58.407	Poecilia_latipinna
ENSODEG00000015832	-	100	58.859	ENSPMEG00000018504	aptx	100	58.702	Poecilia_mexicana
ENSODEG00000015832	-	100	58.559	ENSPMEG00000019789	APTX	100	58.407	Poecilia_mexicana
ENSODEG00000015832	-	100	55.422	ENSPREG00000004375	aptx	100	55.120	Poecilia_reticulata
ENSODEG00000015832	-	100	90.761	ENSPPYG00000019142	APTX	96	88.921	Pongo_abelii
ENSODEG00000015832	-	100	93.220	ENSPCAG00000010014	APTX	100	72.303	Procavia_capensis
ENSODEG00000015832	-	100	91.304	ENSPCOG00000016780	APTX	100	90.643	Propithecus_coquereli
ENSODEG00000015832	-	100	85.864	ENSPVAG00000011468	APTX	97	85.131	Pteropus_vampyrus
ENSODEG00000015832	-	99	60.479	ENSPNYG00000007675	aptx	100	60.479	Pundamilia_nyererei
ENSODEG00000015832	-	99	61.722	ENSPNAG00000015984	aptx	99	56.176	Pygocentrus_nattereri
ENSODEG00000015832	-	99	89.560	ENSRNOG00000006582	Aptx	99	80.000	Rattus_norvegicus
ENSODEG00000015832	-	100	94.915	ENSRBIG00000042913	APTX	100	87.719	Rhinopithecus_bieti
ENSODEG00000015832	-	100	94.915	ENSRROG00000035395	APTX	100	87.719	Rhinopithecus_roxellana
ENSODEG00000015832	-	100	90.217	ENSSBOG00000025215	APTX	100	87.464	Saimiri_boliviensis_boliviensis
ENSODEG00000015832	-	99	71.038	ENSSHAG00000012205	APTX	97	66.667	Sarcophilus_harrisii
ENSODEG00000015832	-	99	74.302	ENSSFOG00015009267	aptx	99	60.286	Scleropages_formosus
ENSODEG00000015832	-	100	63.547	ENSSMAG00000008839	aptx	100	60.060	Scophthalmus_maximus
ENSODEG00000015832	-	100	64.407	ENSSDUG00000001989	aptx	100	60.843	Seriola_dumerili
ENSODEG00000015832	-	100	66.102	ENSSLDG00000004915	aptx	100	60.060	Seriola_lalandi_dorsalis
ENSODEG00000015832	-	100	73.770	ENSSPUG00000008994	APTX	87	63.842	Sphenodon_punctatus
ENSODEG00000015832	-	100	66.010	ENSSPAG00000020373	aptx	100	61.194	Stegastes_partitus
ENSODEG00000015832	-	99	89.674	ENSSSCG00000011001	APTX	100	88.304	Sus_scrofa
ENSODEG00000015832	-	100	71.196	ENSTGUG00000001441	APTX	100	62.029	Taeniopygia_guttata
ENSODEG00000015832	-	99	67.978	ENSTRUG00000009794	aptx	99	59.036	Takifugu_rubripes
ENSODEG00000015832	-	99	71.348	ENSTNIG00000010570	aptx	98	60.486	Tetraodon_nigroviridis
ENSODEG00000015832	-	100	90.062	ENSTBEG00000008504	APTX	96	82.216	Tupaia_belangeri
ENSODEG00000015832	-	93	82.019	ENSTTRG00000007384	APTX	96	82.759	Tursiops_truncatus
ENSODEG00000015832	-	99	90.110	ENSUAMG00000003700	APTX	97	87.977	Ursus_americanus
ENSODEG00000015832	-	99	90.110	ENSUMAG00000005837	APTX	99	88.235	Ursus_maritimus
ENSODEG00000015832	-	94	88.372	ENSVPAG00000001297	APTX	75	86.667	Vicugna_pacos
ENSODEG00000015832	-	100	89.674	ENSVVUG00000021130	APTX	100	87.719	Vulpes_vulpes
ENSODEG00000015832	-	99	74.576	ENSXETG00000024143	aptx	99	59.714	Xenopus_tropicalis
ENSODEG00000015832	-	100	69.061	ENSXCOG00000005020	aptx	100	56.497	Xiphophorus_couchianus
ENSODEG00000015832	-	100	69.231	ENSXMAG00000022086	aptx	97	58.651	Xiphophorus_maculatus