EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 15263 bases
Position: chrJH651699.1:3962060-3977322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021518	HABP4_PAI-RBP1	PF04774.15	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021776	-	561	-	ENSODEP00000021518	186 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015838	-	99	39.362	ENSODEG00000003498	-	53	39.894
ENSODEG00000015838	-	99	44.149	ENSODEG00000015433	-	50	45.213
ENSODEG00000015838	-	99	42.365	ENSODEG00000006835	-	53	39.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015838	-	99	40.385	ENSAPOG00000016190	serbp1b	50	40.865	Acanthochromis_polyacanthus
ENSODEG00000015838	-	99	37.619	ENSAPOG00000001006	serbp1a	50	44.670	Acanthochromis_polyacanthus
ENSODEG00000015838	-	73	38.095	ENSACIG00000004102	-	80	37.415	Amphilophus_citrinellus
ENSODEG00000015838	-	99	41.905	ENSATEG00000021402	serbp1b	51	41.905	Anabas_testudineus
ENSODEG00000015838	-	77	64.138	ENSAPLG00000008194	HABP4	55	60.294	Anas_platyrhynchos
ENSODEG00000015838	-	67	47.445	ENSACAG00000025960	-	90	46.377	Anolis_carolinensis
ENSODEG00000015838	-	99	41.706	ENSACLG00000012541	serbp1b	51	42.654	Astatotilapia_calliptera
ENSODEG00000015838	-	99	45.745	ENSACLG00000013964	HABP4	51	45.213	Astatotilapia_calliptera
ENSODEG00000015838	-	99	83.696	ENSCAFG00000001205	HABP4	60	83.696	Canis_familiaris
ENSODEG00000015838	-	99	77.717	ENSTSYG00000012837	HABP4	50	77.717	Carlito_syrichta
ENSODEG00000015838	-	99	42.365	ENSCAPG00000013397	SERBP1	56	43.350	Cavia_aperea
ENSODEG00000015838	-	99	87.027	ENSCAPG00000014437	HABP4	62	87.027	Cavia_aperea
ENSODEG00000015838	-	99	42.553	ENSCCAG00000027532	-	55	42.553	Cebus_capucinus
ENSODEG00000015838	-	99	42.365	ENSCLAG00000007459	SERBP1	59	43.350	Chinchilla_lanigera
ENSODEG00000015838	-	99	83.152	ENSCANG00000035903	HABP4	100	69.072	Colobus_angolensis_palliatus
ENSODEG00000015838	-	99	80.435	ENSCGRG00000004203	-	99	80.435	Cricetulus_griseus_crigri
ENSODEG00000015838	-	99	44.974	ENSCSEG00000011016	-	51	41.885	Cynoglossus_semilaevis
ENSODEG00000015838	-	99	50.526	ENSDARG00000025174	zgc:103482	51	50.270	Danio_rerio
ENSODEG00000015838	-	73	37.888	ENSDARG00000087421	serbp1b	52	40.092	Danio_rerio
ENSODEG00000015838	-	92	46.552	ENSELUG00000003727	serbp1a	52	40.359	Esox_lucius
ENSODEG00000015838	-	99	36.250	ENSELUG00000004698	serbp1b	53	41.441	Esox_lucius
ENSODEG00000015838	-	99	47.030	ENSELUG00000011872	zgc:103482	52	43.350	Esox_lucius
ENSODEG00000015838	-	96	92.737	ENSFDAG00000011255	-	100	92.737	Fukomys_damarensis
ENSODEG00000015838	-	99	42.365	ENSFDAG00000016661	SERBP1	65	47.126	Fukomys_damarensis
ENSODEG00000015838	-	99	45.550	ENSFHEG00000018366	HABP4	52	43.316	Fundulus_heteroclitus
ENSODEG00000015838	-	99	39.906	ENSFHEG00000000385	serbp1b	51	41.706	Fundulus_heteroclitus
ENSODEG00000015838	-	99	40.426	ENSGMOG00000007621	zgc:103482	62	43.085	Gadus_morhua
ENSODEG00000015838	-	99	41.799	ENSGAFG00000006060	serbp1a	50	46.040	Gambusia_affinis
ENSODEG00000015838	-	99	43.627	ENSGACG00000014467	serbp1a	53	43.781	Gasterosteus_aculeatus
ENSODEG00000015838	-	99	48.128	ENSGACG00000006722	HABP4	52	47.059	Gasterosteus_aculeatus
ENSODEG00000015838	-	67	78.400	ENSGAGG00000021359	HABP4	82	78.049	Gopherus_agassizii
ENSODEG00000015838	-	99	46.277	ENSHBUG00000003616	HABP4	51	45.745	Haplochromis_burtoni
ENSODEG00000015838	-	99	41.706	ENSHBUG00000014305	serbp1b	51	42.654	Haplochromis_burtoni
ENSODEG00000015838	-	99	43.850	ENSHBUG00000010298	serbp1a	50	44.000	Haplochromis_burtoni
ENSODEG00000015838	-	82	92.763	ENSHGLG00100013577	-	100	92.763	Heterocephalus_glaber_male
ENSODEG00000015838	-	99	41.489	ENSHCOG00000003516	HABP4	52	39.894	Hippocampus_comes
ENSODEG00000015838	-	99	38.942	ENSIPUG00000006028	serbp1b	52	41.346	Ictalurus_punctatus
ENSODEG00000015838	-	99	41.584	ENSIPUG00000005252	serbp1a	51	41.089	Ictalurus_punctatus
ENSODEG00000015838	-	100	82.258	ENSSTOG00000025805	-	100	82.258	Ictidomys_tridecemlineatus
ENSODEG00000015838	-	99	40.758	ENSKMAG00000005104	serbp1b	51	41.706	Kryptolebias_marmoratus
ENSODEG00000015838	-	99	45.876	ENSKMAG00000000193	HABP4	51	44.330	Kryptolebias_marmoratus
ENSODEG00000015838	-	99	39.070	ENSLBEG00000009964	serbp1b	52	40.000	Labrus_bergylta
ENSODEG00000015838	-	99	46.842	ENSLBEG00000018951	HABP4	51	45.263	Labrus_bergylta
ENSODEG00000015838	-	99	46.774	ENSLBEG00000005289	serbp1a	50	42.157	Labrus_bergylta
ENSODEG00000015838	-	99	53.061	ENSLOCG00000009195	HABP4	51	55.612	Lepisosteus_oculatus
ENSODEG00000015838	-	98	39.474	ENSLAFG00000029367	-	50	41.579	Loxodonta_africana
ENSODEG00000015838	-	99	83.696	ENSMLEG00000042696	HABP4	100	69.036	Mandrillus_leucophaeus
ENSODEG00000015838	-	99	40.284	ENSMAMG00000001591	serbp1b	51	41.706	Mastacembelus_armatus
ENSODEG00000015838	-	99	44.103	ENSMAMG00000018229	serbp1a	51	43.590	Mastacembelus_armatus
ENSODEG00000015838	-	99	45.745	ENSMZEG00005007159	HABP4	51	45.213	Maylandia_zebra
ENSODEG00000015838	-	62	57.759	ENSMGAG00000009455	-	51	74.324	Meleagris_gallopavo
ENSODEG00000015838	-	99	43.434	ENSMGAG00000011975	SERBP1	65	43.434	Meleagris_gallopavo
ENSODEG00000015838	-	99	39.423	ENSMODG00000000802	SERBP1	61	43.350	Monodelphis_domestica
ENSODEG00000015838	-	99	41.148	ENSMALG00000007021	serbp1b	51	40.670	Monopterus_albus
ENSODEG00000015838	-	99	45.641	ENSMALG00000017721	HABP4	51	45.361	Monopterus_albus
ENSODEG00000015838	-	99	83.696	ENSMLUG00000017282	HABP4	62	83.696	Myotis_lucifugus
ENSODEG00000015838	-	99	41.176	ENSNBRG00000023789	serbp1a	50	44.724	Neolamprologus_brichardi
ENSODEG00000015838	-	99	41.706	ENSNBRG00000005533	serbp1b	51	42.654	Neolamprologus_brichardi
ENSODEG00000015838	-	98	73.370	ENSOPRG00000011736	-	80	76.000	Ochotona_princeps
ENSODEG00000015838	-	99	40.741	ENSONIG00000018597	serbp1b	52	41.667	Oreochromis_niloticus
ENSODEG00000015838	-	99	36.937	ENSONIG00000002600	serbp1a	50	41.872	Oreochromis_niloticus
ENSODEG00000015838	-	99	47.340	ENSONIG00000015205	HABP4	51	46.809	Oreochromis_niloticus
ENSODEG00000015838	-	99	41.827	ENSOANG00000007767	SERBP1	55	39.604	Ornithorhynchus_anatinus
ENSODEG00000015838	-	99	43.005	ENSORLG00000003929	HABP4	51	41.799	Oryzias_latipes
ENSODEG00000015838	-	73	41.772	ENSORLG00000010782	serbp1b	51	41.706	Oryzias_latipes
ENSODEG00000015838	-	99	43.005	ENSORLG00020002674	HABP4	51	41.799	Oryzias_latipes_hni
ENSODEG00000015838	-	99	44.149	ENSORLG00020010017	serbp1b	51	41.706	Oryzias_latipes_hni
ENSODEG00000015838	-	99	44.149	ENSORLG00015004813	serbp1b	51	41.706	Oryzias_latipes_hsok
ENSODEG00000015838	-	99	42.857	ENSORLG00015011381	HABP4	51	41.799	Oryzias_latipes_hsok
ENSODEG00000015838	-	99	44.681	ENSOMEG00000010108	serbp1b	51	41.905	Oryzias_melastigma
ENSODEG00000015838	-	99	43.316	ENSOMEG00000020869	HABP4	52	41.711	Oryzias_melastigma
ENSODEG00000015838	-	99	82.065	ENSOARG00000008461	HABP4	50	82.065	Ovis_aries
ENSODEG00000015838	-	99	83.152	ENSPPAG00000031320	HABP4	99	70.213	Pan_paniscus
ENSODEG00000015838	-	99	84.783	ENSPTIG00000010954	HABP4	61	84.783	Panthera_tigris_altaica
ENSODEG00000015838	-	99	43.684	ENSPTRG00000048835	-	58	43.085	Pan_troglodytes
ENSODEG00000015838	-	99	46.193	ENSPKIG00000017795	zgc:103482	51	45.960	Paramormyrops_kingsleyae
ENSODEG00000015838	-	99	36.216	ENSPKIG00000010843	-	96	39.247	Paramormyrops_kingsleyae
ENSODEG00000015838	-	99	66.667	ENSPSIG00000012717	HABP4	79	65.591	Pelodiscus_sinensis
ENSODEG00000015838	-	99	81.522	ENSPEMG00000021224	-	99	81.522	Peromyscus_maniculatus_bairdii
ENSODEG00000015838	-	99	41.232	ENSPFOG00000007788	serbp1b	51	42.654	Poecilia_formosa
ENSODEG00000015838	-	73	46.377	ENSPFOG00000007883	HABP4	50	43.548	Poecilia_formosa
ENSODEG00000015838	-	99	36.444	ENSPFOG00000007643	serbp1a	50	42.439	Poecilia_formosa
ENSODEG00000015838	-	99	41.232	ENSPLAG00000008801	-	51	42.654	Poecilia_latipinna
ENSODEG00000015838	-	99	36.444	ENSPLAG00000013912	serbp1a	50	43.902	Poecilia_latipinna
ENSODEG00000015838	-	73	46.377	ENSPLAG00000003224	HABP4	51	43.548	Poecilia_latipinna
ENSODEG00000015838	-	99	36.889	ENSPMEG00000007280	serbp1a	50	42.927	Poecilia_mexicana
ENSODEG00000015838	-	99	41.232	ENSPMEG00000013774	serbp1b	51	42.654	Poecilia_mexicana
ENSODEG00000015838	-	73	46.377	ENSPMEG00000010514	HABP4	50	44.086	Poecilia_mexicana
ENSODEG00000015838	-	99	36.444	ENSPREG00000005659	serbp1a	50	43.902	Poecilia_reticulata
ENSODEG00000015838	-	73	43.662	ENSPREG00000015946	HABP4	51	42.703	Poecilia_reticulata
ENSODEG00000015838	-	99	41.232	ENSPREG00000005399	serbp1b	51	42.654	Poecilia_reticulata
ENSODEG00000015838	-	99	83.152	ENSPPYG00000029705	HABP4	51	83.152	Pongo_abelii
ENSODEG00000015838	-	99	43.316	ENSPNYG00000019256	serbp1a	50	41.379	Pundamilia_nyererei
ENSODEG00000015838	-	99	41.706	ENSPNYG00000020395	serbp1b	51	42.654	Pundamilia_nyererei
ENSODEG00000015838	-	99	51.562	ENSPNAG00000010281	zgc:103482	50	51.042	Pygocentrus_nattereri
ENSODEG00000015838	-	100	82.796	ENSRROG00000039635	HABP4	100	82.796	Rhinopithecus_roxellana
ENSODEG00000015838	-	99	78.804	ENSSBOG00000031480	HABP4	54	78.804	Saimiri_boliviensis_boliviensis
ENSODEG00000015838	-	96	69.832	ENSSHAG00000009392	HABP4	51	68.715	Sarcophilus_harrisii
ENSODEG00000015838	-	99	45.745	ENSSHAG00000008297	SERBP1	76	46.809	Sarcophilus_harrisii
ENSODEG00000015838	-	99	40.284	ENSSMAG00000009311	serbp1b	51	40.284	Scophthalmus_maximus
ENSODEG00000015838	-	99	33.333	ENSSMAG00000018372	serbp1a	51	40.284	Scophthalmus_maximus
ENSODEG00000015838	-	99	40.845	ENSSDUG00000008857	serbp1b	52	39.437	Seriola_dumerili
ENSODEG00000015838	-	99	38.806	ENSSLDG00000005983	serbp1a	51	39.906	Seriola_lalandi_dorsalis
ENSODEG00000015838	-	99	40.845	ENSSLDG00000020011	serbp1b	52	39.437	Seriola_lalandi_dorsalis
ENSODEG00000015838	-	99	76.630	ENSSARG00000004558	HABP4	62	75.000	Sorex_araneus
ENSODEG00000015838	-	99	42.365	ENSSARG00000000803	SERBP1	65	43.350	Sorex_araneus
ENSODEG00000015838	-	99	40.758	ENSSPAG00000003541	serbp1b	51	41.706	Stegastes_partitus
ENSODEG00000015838	-	92	61.404	ENSTGUG00000000508	HABP4	60	60.234	Taeniopygia_guttata
ENSODEG00000015838	-	99	43.434	ENSTGUG00000010185	SERBP1	65	43.434	Taeniopygia_guttata
ENSODEG00000015838	-	73	40.881	ENSTRUG00000023406	serbp1b	51	41.706	Takifugu_rubripes
ENSODEG00000015838	-	94	39.785	ENSTRUG00000018368	serbp1a	50	43.719	Takifugu_rubripes
ENSODEG00000015838	-	99	42.487	ENSTNIG00000016673	HABP4	55	41.799	Tetraodon_nigroviridis
ENSODEG00000015838	-	99	57.065	ENSTBEG00000003863	-	76	57.065	Tupaia_belangeri
ENSODEG00000015838	-	100	83.871	ENSUMAG00000009860	-	100	83.871	Ursus_maritimus
ENSODEG00000015838	-	99	83.696	ENSVVUG00000022970	HABP4	95	82.192	Vulpes_vulpes
ENSODEG00000015838	-	99	45.263	ENSXETG00000012394	serbp1	50	42.439	Xenopus_tropicalis
ENSODEG00000015838	-	97	46.739	ENSXCOG00000010063	serbp1b	53	46.739	Xiphophorus_couchianus
ENSODEG00000015838	-	99	44.149	ENSXMAG00000011677	serbp1a	50	44.335	Xiphophorus_maculatus
ENSODEG00000015838	-	99	41.706	ENSXMAG00000012527	serbp1b	51	42.654	Xiphophorus_maculatus
ENSODEG00000015838	-	73	44.928	ENSXMAG00000015986	HABP4	51	42.553	Xiphophorus_maculatus