EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000015847 (Gene tree)
Gene ID: 101560812
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 23763 bases
Position: chrJH651671.1:6089038-6112800
Accession: 101560812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021530	SAP	PF02037.27	5.7e-08	1	1
ENSODEP00000021529	SAP	PF02037.27	5.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021787	XRCC6-201	1818	XM_004642577	ENSODEP00000021529	605 (aa)	XP_004642634	UPI000333F158
ENSODET00000021788	XRCC6-202	1794	-	ENSODEP00000021530	597 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015847	XRCC6	99	82.372	ENSG00000196419	XRCC6	99	82.208	Homo_sapiens
ENSODEG00000015847	XRCC6	99	54.173	ENSAPOG00000012704	xrcc6	99	54.173	Acanthochromis_polyacanthus
ENSODEG00000015847	XRCC6	99	55.483	ENSACIG00000021277	xrcc6	99	54.992	Amphilophus_citrinellus
ENSODEG00000015847	XRCC6	99	53.355	ENSAOCG00000021344	xrcc6	99	53.355	Amphiprion_ocellaris
ENSODEG00000015847	XRCC6	99	53.846	ENSAPEG00000020712	xrcc6	99	53.846	Amphiprion_percula
ENSODEG00000015847	XRCC6	99	55.810	ENSATEG00000007119	xrcc6	99	55.646	Anabas_testudineus
ENSODEG00000015847	XRCC6	91	69.801	ENSAPLG00000004469	XRCC6	99	69.801	Anas_platyrhynchos
ENSODEG00000015847	XRCC6	99	82.702	ENSANAG00000018684	XRCC6	99	82.537	Aotus_nancymaae
ENSODEG00000015847	XRCC6	99	76.263	ENSANAG00000020017	-	99	76.263	Aotus_nancymaae
ENSODEG00000015847	XRCC6	99	72.148	ENSANAG00000023445	-	99	71.980	Aotus_nancymaae
ENSODEG00000015847	XRCC6	99	71.664	ENSANAG00000035230	-	99	71.499	Aotus_nancymaae
ENSODEG00000015847	XRCC6	99	55.483	ENSACLG00000018608	xrcc6	99	55.483	Astatotilapia_calliptera
ENSODEG00000015847	XRCC6	99	56.956	ENSAMXG00000007545	xrcc6	99	56.628	Astyanax_mexicanus
ENSODEG00000015847	XRCC6	99	82.208	ENSCJAG00000045512	XRCC6	99	82.043	Callithrix_jacchus
ENSODEG00000015847	XRCC6	100	82.459	ENSTSYG00000011348	XRCC6	100	82.295	Carlito_syrichta
ENSODEG00000015847	XRCC6	99	77.729	ENSCCAG00000030468	-	99	77.729	Cebus_capucinus
ENSODEG00000015847	XRCC6	99	78.089	ENSCCAG00000030041	-	95	77.924	Cebus_capucinus
ENSODEG00000015847	XRCC6	99	67.327	ENSCCAG00000037663	-	97	67.327	Cebus_capucinus
ENSODEG00000015847	XRCC6	99	67.899	ENSCCAG00000035711	-	99	67.731	Cebus_capucinus
ENSODEG00000015847	XRCC6	99	82.372	ENSCATG00000042366	XRCC6	99	82.208	Cercocebus_atys
ENSODEG00000015847	XRCC6	100	93.596	ENSCLAG00000016669	XRCC6	100	93.596	Chinchilla_lanigera
ENSODEG00000015847	XRCC6	99	82.372	ENSCSAG00000005784	XRCC6	99	82.208	Chlorocebus_sabaeus
ENSODEG00000015847	XRCC6	99	72.742	ENSCPBG00000020535	XRCC6	99	72.742	Chrysemys_picta_bellii
ENSODEG00000015847	XRCC6	98	33.556	ENSCING00000000633	-	96	33.791	Ciona_intestinalis
ENSODEG00000015847	XRCC6	99	82.372	ENSCANG00000031032	XRCC6	99	82.208	Colobus_angolensis_palliatus
ENSODEG00000015847	XRCC6	100	77.340	ENSCGRG00001019029	Xrcc6	100	77.340	Cricetulus_griseus_chok1gshd
ENSODEG00000015847	XRCC6	100	84.401	ENSCGRG00000001528	Xrcc6	100	84.401	Cricetulus_griseus_crigri
ENSODEG00000015847	XRCC6	99	55.810	ENSCSEG00000020434	xrcc6	99	55.646	Cynoglossus_semilaevis
ENSODEG00000015847	XRCC6	99	55.810	ENSCVAG00000002189	xrcc6	99	56.137	Cyprinodon_variegatus
ENSODEG00000015847	XRCC6	99	57.886	ENSDARG00000071551	xrcc6	100	57.886	Danio_rerio
ENSODEG00000015847	XRCC6	78	76.923	ENSETEG00000015333	-	77	75.385	Echinops_telfairi
ENSODEG00000015847	XRCC6	100	83.908	ENSEASG00005001514	XRCC6	100	83.908	Equus_asinus_asinus
ENSODEG00000015847	XRCC6	100	83.580	ENSECAG00000017563	XRCC6	100	83.837	Equus_caballus
ENSODEG00000015847	XRCC6	99	53.846	ENSELUG00000020301	xrcc6	99	54.010	Esox_lucius
ENSODEG00000015847	XRCC6	99	67.869	ENSFALG00000011908	XRCC6	97	68.197	Ficedula_albicollis
ENSODEG00000015847	XRCC6	99	56.628	ENSFHEG00000016833	xrcc6	99	56.628	Fundulus_heteroclitus
ENSODEG00000015847	XRCC6	99	47.145	ENSGMOG00000013524	xrcc6	100	47.308	Gadus_morhua
ENSODEG00000015847	XRCC6	99	66.612	ENSGALG00000011932	XRCC6	99	66.612	Gallus_gallus
ENSODEG00000015847	XRCC6	99	54.337	ENSGAFG00000008130	xrcc6	99	54.337	Gambusia_affinis
ENSODEG00000015847	XRCC6	99	53.571	ENSGACG00000004868	xrcc6	99	53.571	Gasterosteus_aculeatus
ENSODEG00000015847	XRCC6	99	72.085	ENSGAGG00000017518	XRCC6	99	72.085	Gopherus_agassizii
ENSODEG00000015847	XRCC6	99	82.537	ENSGGOG00000015885	XRCC6	99	82.372	Gorilla_gorilla
ENSODEG00000015847	XRCC6	92	56.106	ENSHBUG00000023281	xrcc6	99	56.106	Haplochromis_burtoni
ENSODEG00000015847	XRCC6	100	90.805	ENSHGLG00000018078	XRCC6	100	90.640	Heterocephalus_glaber_female
ENSODEG00000015847	XRCC6	100	90.805	ENSHGLG00100011264	XRCC6	100	90.640	Heterocephalus_glaber_male
ENSODEG00000015847	XRCC6	99	53.607	ENSHCOG00000009821	xrcc6	99	53.770	Hippocampus_comes
ENSODEG00000015847	XRCC6	96	57.313	ENSIPUG00000000767	xrcc6	96	57.313	Ictalurus_punctatus
ENSODEG00000015847	XRCC6	100	87.192	ENSSTOG00000009490	XRCC6	100	87.192	Ictidomys_tridecemlineatus
ENSODEG00000015847	XRCC6	100	77.997	ENSJJAG00000017136	Xrcc6	100	79.146	Jaculus_jaculus
ENSODEG00000015847	XRCC6	99	55.974	ENSKMAG00000002141	xrcc6	99	55.974	Kryptolebias_marmoratus
ENSODEG00000015847	XRCC6	99	55.483	ENSLBEG00000002691	xrcc6	99	54.992	Labrus_bergylta
ENSODEG00000015847	XRCC6	90	62.376	ENSLOCG00000011533	xrcc6	99	62.376	Lepisosteus_oculatus
ENSODEG00000015847	XRCC6	99	82.372	ENSMFAG00000003352	XRCC6	99	82.208	Macaca_fascicularis
ENSODEG00000015847	XRCC6	99	82.372	ENSMMUG00000001856	XRCC6	99	82.208	Macaca_mulatta
ENSODEG00000015847	XRCC6	99	82.372	ENSMNEG00000035076	XRCC6	99	82.208	Macaca_nemestrina
ENSODEG00000015847	XRCC6	99	82.372	ENSMLEG00000019869	XRCC6	99	82.208	Mandrillus_leucophaeus
ENSODEG00000015847	XRCC6	99	54.412	ENSMAMG00000003368	xrcc6	99	54.575	Mastacembelus_armatus
ENSODEG00000015847	XRCC6	95	54.608	ENSMAMG00000003405	xrcc6	97	54.608	Mastacembelus_armatus
ENSODEG00000015847	XRCC6	99	54.992	ENSMZEG00005028080	xrcc6	99	54.992	Maylandia_zebra
ENSODEG00000015847	XRCC6	99	66.285	ENSMGAG00000012146	XRCC6	99	66.232	Meleagris_gallopavo
ENSODEG00000015847	XRCC6	99	84.868	ENSMAUG00000017340	Xrcc6	100	84.868	Mesocricetus_auratus
ENSODEG00000015847	XRCC6	99	83.717	ENSMOCG00000015717	Xrcc6	100	83.717	Microtus_ochrogaster
ENSODEG00000015847	XRCC6	99	54.276	ENSMMOG00000003536	xrcc6	99	53.783	Mola_mola
ENSODEG00000015847	XRCC6	99	56.301	ENSMALG00000013912	xrcc6	95	56.137	Monopterus_albus
ENSODEG00000015847	XRCC6	100	77.176	MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.176	Mus_caroli
ENSODEG00000015847	XRCC6	100	82.594	ENSMUSG00000022471	Xrcc6	100	82.594	Mus_musculus
ENSODEG00000015847	XRCC6	100	81.609	MGP_PahariEiJ_G0020069	Xrcc6	100	81.609	Mus_pahari
ENSODEG00000015847	XRCC6	97	82.003	MGP_SPRETEiJ_G0020967	Xrcc6	100	82.504	Mus_spretus
ENSODEG00000015847	XRCC6	100	83.251	ENSNGAG00000013750	Xrcc6	100	83.251	Nannospalax_galili
ENSODEG00000015847	XRCC6	99	55.483	ENSNBRG00000004125	xrcc6	99	55.810	Neolamprologus_brichardi
ENSODEG00000015847	XRCC6	95	83.247	ENSOPRG00000002386	XRCC6	99	83.247	Ochotona_princeps
ENSODEG00000015847	XRCC6	99	55.974	ENSONIG00000019715	xrcc6	99	55.974	Oreochromis_niloticus
ENSODEG00000015847	XRCC6	68	79.506	ENSOANG00000011328	XRCC6	98	79.506	Ornithorhynchus_anatinus
ENSODEG00000015847	XRCC6	99	85.974	ENSOCUG00000006948	XRCC6	99	85.974	Oryctolagus_cuniculus
ENSODEG00000015847	XRCC6	99	55.065	ENSORLG00020007820	xrcc6	99	54.739	Oryzias_latipes_hni
ENSODEG00000015847	XRCC6	99	54.575	ENSORLG00015006406	xrcc6	99	54.248	Oryzias_latipes_hsok
ENSODEG00000015847	XRCC6	99	54.412	ENSOMEG00000008998	xrcc6	99	54.085	Oryzias_melastigma
ENSODEG00000015847	XRCC6	99	84.868	ENSOGAG00000008821	XRCC6	100	84.868	Otolemur_garnettii
ENSODEG00000015847	XRCC6	99	75.294	ENSPPAG00000037167	XRCC6	99	76.134	Pan_paniscus
ENSODEG00000015847	XRCC6	99	82.372	ENSPTRG00000022548	XRCC6	99	83.103	Pan_troglodytes
ENSODEG00000015847	XRCC6	99	82.372	ENSPTRG00000045824	XRCC6	99	83.103	Pan_troglodytes
ENSODEG00000015847	XRCC6	99	82.372	ENSPANG00000001252	XRCC6	99	83.103	Papio_anubis
ENSODEG00000015847	XRCC6	99	58.632	ENSPKIG00000003974	xrcc6	100	58.306	Paramormyrops_kingsleyae
ENSODEG00000015847	XRCC6	99	54.063	ENSPMGG00000014220	xrcc6	100	54.063	Periophthalmus_magnuspinnatus
ENSODEG00000015847	XRCC6	100	83.087	ENSPEMG00000023446	Xrcc6	100	83.087	Peromyscus_maniculatus_bairdii
ENSODEG00000015847	XRCC6	99	78.254	ENSPCIG00000026409	XRCC6	99	78.254	Phascolarctos_cinereus
ENSODEG00000015847	XRCC6	99	55.974	ENSPFOG00000017173	xrcc6	99	56.301	Poecilia_formosa
ENSODEG00000015847	XRCC6	99	55.646	ENSPLAG00000000562	xrcc6	99	55.974	Poecilia_latipinna
ENSODEG00000015847	XRCC6	99	56.137	ENSPMEG00000018478	xrcc6	99	56.465	Poecilia_mexicana
ENSODEG00000015847	XRCC6	99	55.954	ENSPREG00000020957	xrcc6	93	56.281	Poecilia_reticulata
ENSODEG00000015847	XRCC6	99	72.817	ENSPPYG00000011876	XRCC6	99	72.652	Pongo_abelii
ENSODEG00000015847	XRCC6	100	82.266	ENSPVAG00000001168	XRCC6	100	82.102	Pteropus_vampyrus
ENSODEG00000015847	XRCC6	99	55.483	ENSPNYG00000003815	xrcc6	99	52.804	Pundamilia_nyererei
ENSODEG00000015847	XRCC6	100	82.266	ENSRNOG00000006392	Xrcc6	100	82.102	Rattus_norvegicus
ENSODEG00000015847	XRCC6	99	76.277	ENSRBIG00000039794	XRCC6	99	76.112	Rhinopithecus_bieti
ENSODEG00000015847	XRCC6	99	82.372	ENSRROG00000030297	XRCC6	99	82.208	Rhinopithecus_roxellana
ENSODEG00000015847	XRCC6	68	71.216	ENSSBOG00000024724	-	99	71.216	Saimiri_boliviensis_boliviensis
ENSODEG00000015847	XRCC6	99	77.504	ENSSHAG00000010790	XRCC6	99	77.504	Sarcophilus_harrisii
ENSODEG00000015847	XRCC6	99	60.912	ENSSFOG00015014409	xrcc6	100	60.912	Scleropages_formosus
ENSODEG00000015847	XRCC6	99	55.646	ENSSMAG00000006496	xrcc6	99	55.155	Scophthalmus_maximus
ENSODEG00000015847	XRCC6	99	55.810	ENSSDUG00000007542	xrcc6	99	55.646	Seriola_dumerili
ENSODEG00000015847	XRCC6	99	55.319	ENSSLDG00000009974	xrcc6	99	55.155	Seriola_lalandi_dorsalis
ENSODEG00000015847	XRCC6	99	72.250	ENSSPUG00000012086	XRCC6	99	72.250	Sphenodon_punctatus
ENSODEG00000015847	XRCC6	99	55.155	ENSSPAG00000015199	xrcc6	99	55.319	Stegastes_partitus
ENSODEG00000015847	XRCC6	96	70.205	ENSTGUG00000009852	-	100	68.576	Taeniopygia_guttata
ENSODEG00000015847	XRCC6	99	53.770	ENSTRUG00000017070	xrcc6	99	53.770	Takifugu_rubripes
ENSODEG00000015847	XRCC6	95	55.254	ENSTNIG00000012947	xrcc6	99	55.254	Tetraodon_nigroviridis
ENSODEG00000015847	XRCC6	95	77.720	ENSTBEG00000011736	XRCC6	99	77.720	Tupaia_belangeri
ENSODEG00000015847	XRCC6	99	69.408	ENSTTRG00000006749	XRCC6	99	69.408	Tursiops_truncatus
ENSODEG00000015847	XRCC6	99	55.646	ENSXMAG00000009691	xrcc6	99	55.646	Xiphophorus_maculatus